RNA–Protein interactions for RNA: ENST00000507955.5

DDX41-208, Transcript of DEAD-box helicase 41, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX41, Length 2,607 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-208ENST00000507955 CCT4P50991 539 aaKnown RBP17.99■□□□□ 0.47
DDX41-208ENST00000507955 ZC3H6P61129 1189 aaKnown RBP17.99■□□□□ 0.47
DDX41-208ENST00000507955 NFAT5O94916 1531 aa17.99■□□□□ 0.47
DDX41-208ENST00000507955 ZNF530Q6P9A1 599 aaPredicted RBP17.98■□□□□ 0.47
DDX41-208ENST00000507955 HSCBQ8IWL3 235 aa17.98■□□□□ 0.47
DDX41-208ENST00000507955 CDC45O75419 566 aa17.98■□□□□ 0.47
DDX41-208ENST00000507955 SDSP20132 328 aa17.98■□□□□ 0.47
DDX41-208ENST00000507955 GNAI2P04899 355 aa17.97■□□□□ 0.47
DDX41-208ENST00000507955 KCNH5Q8NCM2 988 aa17.97■□□□□ 0.47
DDX41-208ENST00000507955 LRRFIP2Q9Y608 721 aaKnown RBP17.97■□□□□ 0.47
DDX41-208ENST00000507955 KRT28Q7Z3Y7 464 aa17.97■□□□□ 0.47
DDX41-208ENST00000507955 ARHGEF25Q86VW2 580 aa17.97■□□□□ 0.47
DDX41-208ENST00000507955 CHPF2Q9P2E5 772 aa17.96■□□□□ 0.47
DDX41-208ENST00000507955 ADAMTSL3P82987 1691 aa17.96■□□□□ 0.47
DDX41-208ENST00000507955 LRRC37A3O60309 1634 aa17.96■□□□□ 0.47
DDX41-208ENST00000507955 PRAMEF22A3QJZ6 481 aa17.96■□□□□ 0.47
DDX41-208ENST00000507955 ANKRD24Q8TF21 1146 aa17.96■□□□□ 0.47
DDX41-208ENST00000507955 EIF4A1P60842 406 aaKnown RBP17.95■□□□□ 0.46
DDX41-208ENST00000507955 USP44Q9H0E7 712 aa17.95■□□□□ 0.46
DDX41-208ENST00000507955 ZNF142P52746 1687 aaPredicted RBP17.95■□□□□ 0.46
DDX41-208ENST00000507955 BTBD11A6QL63 1104 aa17.94■□□□□ 0.46
DDX41-208ENST00000507955 CEMIPQ8WUJ3 1361 aa17.94■□□□□ 0.46
DDX41-208ENST00000507955 TEFQ10587 303 aa17.94■□□□□ 0.46
DDX41-208ENST00000507955 CABLES1Q8TDN4 633 aa17.94■□□□□ 0.46
DDX41-208ENST00000507955 HMMRO75330 724 aa17.93■□□□□ 0.46
DDX41-208ENST00000507955 PXDNQ92626 1479 aa17.93■□□□□ 0.46
DDX41-208ENST00000507955 USP54Q70EL1 1684 aa17.92■□□□□ 0.46
DDX41-208ENST00000507955 FAM208AQ9UK61 1670 aaKnown RBP17.92■□□□□ 0.46
DDX41-208ENST00000507955 HSP90AB1P08238 724 aaKnown RBP17.91■□□□□ 0.46
DDX41-208ENST00000507955 PDE1AP54750 535 aa17.91■□□□□ 0.46
DDX41-208ENST00000507955 PI4KAP2A4QPH2 592 aa17.91■□□□□ 0.46
DDX41-208ENST00000507955 NBPF7P0C2Y1 421 aaPredicted RBP17.91■□□□□ 0.46
DDX41-208ENST00000507955 PI4KAP1Q8N8J0 262 aa17.91■□□□□ 0.46
DDX41-208ENST00000507955 IL1RAPL2Q9NP60 686 aa17.91■□□□□ 0.46
DDX41-208ENST00000507955 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.91■□□□□ 0.46
DDX41-208ENST00000507955 PROSER3Q2NL68 480 aa17.9■□□□□ 0.46
DDX41-208ENST00000507955 PLEKHO1Q53GL0 409 aaPredicted RBP17.9■□□□□ 0.46
DDX41-208ENST00000507955 AKAP4Q5JQC9 854 aa17.9■□□□□ 0.46
DDX41-208ENST00000507955 GNAI3P08754 354 aa17.9■□□□□ 0.46
DDX41-208ENST00000507955 ARXQ96QS3 562 aa17.9■□□□□ 0.46
DDX41-208ENST00000507955 RNMTO43148 476 aaKnown RBP17.89■□□□□ 0.46
DDX41-208ENST00000507955 UBTFL1P0CB47 393 aaPredicted RBP17.89■□□□□ 0.46
DDX41-208ENST00000507955 MCM4P33991 863 aa17.89■□□□□ 0.46
DDX41-208ENST00000507955 ATP8B2P98198 1209 aa17.89■□□□□ 0.46
DDX41-208ENST00000507955 CHMP5Q9NZZ3 219 aa17.89■□□□□ 0.46
DDX41-208ENST00000507955 C1orf141Q5JVX7 400 aa17.89■□□□□ 0.45
DDX41-208ENST00000507955 USP26Q9BXU7 913 aa17.89■□□□□ 0.45
DDX41-208ENST00000507955 SNX21Q969T3 373 aa17.88■□□□□ 0.45
DDX41-208ENST00000507955 GZF1Q9H116 711 aaPredicted RBP17.88■□□□□ 0.45
DDX41-208ENST00000507955 C19orf44Q9H6X5 657 aa17.88■□□□□ 0.45
DDX41-208ENST00000507955 HSPA2P54652 639 aa17.88■□□□□ 0.45
DDX41-208ENST00000507955 LRRCC1Q9C099 1032 aa17.88■□□□□ 0.45
DDX41-208ENST00000507955 HSP90AA1P07900 732 aaKnown RBP17.87■□□□□ 0.45
DDX41-208ENST00000507955 CHRNA2Q15822 529 aa17.87■□□□□ 0.45
DDX41-208ENST00000507955 BABAM1Q9NWV8 329 aa17.87■□□□□ 0.45
DDX41-208ENST00000507955 C1orf167Q5SNV9 1468 aa17.87■□□□□ 0.45
DDX41-208ENST00000507955 SLC39A6Q13433 755 aa17.86■□□□□ 0.45
DDX41-208ENST00000507955 PPP1R42Q7Z4L9 355 aa17.86■□□□□ 0.45
DDX41-208ENST00000507955 SRCIN1Q9C0H9 1055 aa17.86■□□□□ 0.45
DDX41-208ENST00000507955 NLRP2Q9NX02 1062 aa17.86■□□□□ 0.45
DDX41-208ENST00000507955 NUTM1Q86Y26 1132 aa17.86■□□□□ 0.45
DDX41-208ENST00000507955 MAP4K4O95819 1239 aaPredicted RBP17.85■□□□□ 0.45
DDX41-208ENST00000507955 UNC5CLQ8IV45 518 aa17.85■□□□□ 0.45
DDX41-208ENST00000507955 DDIT3P35638 169 aa17.85■□□□□ 0.45
DDX41-208ENST00000507955 RILPL2Q969X0 211 aa17.85■□□□□ 0.45
DDX41-208ENST00000507955 RGPD5Q99666 1765 aa17.85■□□□□ 0.45
DDX41-208ENST00000507955 DNAAF4Q8WXU2 420 aa17.85■□□□□ 0.45
DDX41-208ENST00000507955 TMEM94Q12767 1356 aa17.84■□□□□ 0.45
DDX41-208ENST00000507955 NCOA3Q9Y6Q9 1424 aa17.84■□□□□ 0.45
DDX41-208ENST00000507955 TRIM6-TRIM34B2RNG4 842 aa17.84■□□□□ 0.45
DDX41-208ENST00000507955 K7ELQ4 463 aaPredicted RBP17.84■□□□□ 0.45
DDX41-208ENST00000507955 SURF6O75683 361 aaKnown RBP17.84■□□□□ 0.45
DDX41-208ENST00000507955 ATF3P18847 181 aa17.84■□□□□ 0.45
DDX41-208ENST00000507955 MX1P20591 662 aa17.84■□□□□ 0.45
DDX41-208ENST00000507955 AMOTQ4VCS5 1084 aa17.84■□□□□ 0.45
DDX41-208ENST00000507955 BEND3Q5T5X7 828 aa17.84■□□□□ 0.45
DDX41-208ENST00000507955 SRGAP3O43295 1099 aa17.84■□□□□ 0.45
DDX41-208ENST00000507955 ERBB3P21860 1342 aa17.84■□□□□ 0.45
DDX41-208ENST00000507955 AIMP1Q12904 312 aaKnown RBP17.84■□□□□ 0.45
DDX41-208ENST00000507955 IBTKQ9P2D0 1353 aaPredicted RBP17.83■□□□□ 0.44
DDX41-208ENST00000507955 SALL3Q9BXA9 1300 aa17.83■□□□□ 0.44
DDX41-208ENST00000507955 GIGYF1O75420 1035 aaPredicted RBP17.83■□□□□ 0.44
DDX41-208ENST00000507955 CWF19L2Q2TBE0 894 aaKnown RBP17.83■□□□□ 0.44
DDX41-208ENST00000507955 ADCY9O60503 1353 aa17.83■□□□□ 0.44
DDX41-208ENST00000507955 PIP4K2AP48426 406 aaPredicted RBP17.82■□□□□ 0.44
DDX41-208ENST00000507955 FAM43AQ8N2R8 423 aa17.82■□□□□ 0.44
DDX41-208ENST00000507955 TNPO1Q92973 898 aaKnown RBP17.82■□□□□ 0.44
DDX41-208ENST00000507955 MAP3K2Q9Y2U5 619 aa17.82■□□□□ 0.44
DDX41-208ENST00000507955 SOS1Q07889 1333 aaPredicted RBP17.82■□□□□ 0.44
DDX41-208ENST00000507955 OSBPL3Q9H4L5 887 aa17.82■□□□□ 0.44
DDX41-208ENST00000507955 MED1Q15648 1581 aaPredicted RBP17.82■□□□□ 0.44
DDX41-208ENST00000507955 FSD2A1L4K1 749 aa17.81■□□□□ 0.44
DDX41-208ENST00000507955 SLIT3O75094 1523 aa17.81■□□□□ 0.44
DDX41-208ENST00000507955 XRCC6P12956 609 aaKnown RBP eCLIP17.81■□□□□ 0.44
DDX41-208ENST00000507955 CASC1Q6TDU7 716 aa17.81■□□□□ 0.44
DDX41-208ENST00000507955 SSH3Q8TE77 659 aa17.81■□□□□ 0.44
DDX41-208ENST00000507955 IL25Q9H293 177 aa17.81■□□□□ 0.44
DDX41-208ENST00000507955 CSB-PGBD3P0DP91 1061 aa17.8■□□□□ 0.44
DDX41-208ENST00000507955 NFATC2IPQ8NCF5 419 aa17.8■□□□□ 0.44
DDX41-208ENST00000507955 TRPM3Q9HCF6 1732 aaPredicted RBP17.8■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 77.5 ms