RNA–Protein interactions for RNA: ENST00000506469.5

YIPF3-213, Transcript of Yip1 domain family member 3, humanhuman

TSL 5 BASIC

Gene YIPF3, Length 1,444 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF3-213ENST00000506469 DUSP27Q5VZP5 1158 aa18.62■□□□□ 0.57
YIPF3-213ENST00000506469 NFATC2IPQ8NCF5 419 aa18.62■□□□□ 0.57
YIPF3-213ENST00000506469 TSR2Q969E8 191 aaKnown RBP18.62■□□□□ 0.57
YIPF3-213ENST00000506469 MBIPQ9NS73 344 aa18.62■□□□□ 0.57
YIPF3-213ENST00000506469 TSPYL4Q9UJ04 414 aa18.62■□□□□ 0.57
YIPF3-213ENST00000506469 FANCIQ9NVI1 1328 aa18.61■□□□□ 0.57
YIPF3-213ENST00000506469 BTBD11A6QL63 1104 aa18.61■□□□□ 0.57
YIPF3-213ENST00000506469 BABAM1Q9NWV8 329 aa18.61■□□□□ 0.57
YIPF3-213ENST00000506469 SCN11AQ9UI33 1791 aa18.61■□□□□ 0.57
YIPF3-213ENST00000506469 ACSBG1Q96GR2 724 aa18.6■□□□□ 0.57
YIPF3-213ENST00000506469 TOGARAM1Q9Y4F4 1720 aa18.6■□□□□ 0.57
YIPF3-213ENST00000506469 PRIM1P49642 420 aaKnown RBP18.59■□□□□ 0.57
YIPF3-213ENST00000506469 TMOD3Q9NYL9 352 aa18.59■□□□□ 0.57
YIPF3-213ENST00000506469 SYTL4Q96C24 671 aaPredicted RBP18.58■□□□□ 0.57
YIPF3-213ENST00000506469 BCL9O00512 1426 aa18.58■□□□□ 0.57
YIPF3-213ENST00000506469 PIGBQ92521 554 aa18.57■□□□□ 0.56
YIPF3-213ENST00000506469 KCNQ3O43525 872 aa18.56■□□□□ 0.56
YIPF3-213ENST00000506469 CENPBP07199 599 aaPredicted RBP18.56■□□□□ 0.56
YIPF3-213ENST00000506469 SLC39A6Q13433 755 aa18.56■□□□□ 0.56
YIPF3-213ENST00000506469 DOT1LQ8TEK3 1739 aa18.56■□□□□ 0.56
YIPF3-213ENST00000506469 SIPA1L3O60292 1781 aaPredicted RBP18.55■□□□□ 0.56
YIPF3-213ENST00000506469 KCNQ2O43526 872 aa18.55■□□□□ 0.56
YIPF3-213ENST00000506469 EXOSC9Q06265 439 aaKnown RBP18.55■□□□□ 0.56
YIPF3-213ENST00000506469 ZNF790Q6PG37 636 aa18.55■□□□□ 0.56
YIPF3-213ENST00000506469 FAM196AQ6ZSG2 479 aa18.55■□□□□ 0.56
YIPF3-213ENST00000506469 BRWD3Q6RI45 1802 aa18.54■□□□□ 0.56
YIPF3-213ENST00000506469 VIRMAQ69YN4 1812 aaKnown RBP18.53■□□□□ 0.56
YIPF3-213ENST00000506469 EIF4A1P60842 406 aaKnown RBP18.53■□□□□ 0.56
YIPF3-213ENST00000506469 TTC5Q8N0Z6 440 aa18.53■□□□□ 0.56
YIPF3-213ENST00000506469 KRT24Q2M2I5 525 aa18.52■□□□□ 0.56
YIPF3-213ENST00000506469 C8orf58Q8NAV2 365 aa18.52■□□□□ 0.56
YIPF3-213ENST00000506469 ASAP1Q9ULH1 1129 aa18.52■□□□□ 0.56
YIPF3-213ENST00000506469 ATG3Q9NT62 314 aa18.51■□□□□ 0.55
YIPF3-213ENST00000506469 KDM3BQ7LBC6 1761 aa18.51■□□□□ 0.55
YIPF3-213ENST00000506469 ELL2O00472 640 aaPredicted RBP18.5■□□□□ 0.55
YIPF3-213ENST00000506469 PTF1AQ7RTS3 328 aa18.5■□□□□ 0.55
YIPF3-213ENST00000506469 TSPYL6Q8N831 410 aa18.5■□□□□ 0.55
YIPF3-213ENST00000506469 ZNF496Q96IT1 587 aaPredicted RBP18.49■□□□□ 0.55
YIPF3-213ENST00000506469 TWISTNBQ3B726 338 aaPredicted RBP18.49■□□□□ 0.55
YIPF3-213ENST00000506469 FMNL2Q96PY5 1086 aa18.49■□□□□ 0.55
YIPF3-213ENST00000506469 BCL11BQ9C0K0 894 aaPredicted RBP18.49■□□□□ 0.55
YIPF3-213ENST00000506469 PAPPAQ13219 1627 aa18.48■□□□□ 0.55
YIPF3-213ENST00000506469 NHSQ6T4R5 1651 aa18.48■□□□□ 0.55
YIPF3-213ENST00000506469 ITGB4P16144 1822 aa18.48■□□□□ 0.55
YIPF3-213ENST00000506469 PTCD1O75127 700 aaKnown RBP18.48■□□□□ 0.55
YIPF3-213ENST00000506469 CT47B1P0C2W7 299 aaPredicted RBP18.48■□□□□ 0.55
YIPF3-213ENST00000506469 KCPQ6ZWJ8 1503 aa18.47■□□□□ 0.55
YIPF3-213ENST00000506469 HEG1Q9ULI3 1381 aa18.47■□□□□ 0.55
YIPF3-213ENST00000506469 VAMP4O75379 141 aa18.47■□□□□ 0.55
YIPF3-213ENST00000506469 TRIM37O94972 964 aa18.47■□□□□ 0.55
YIPF3-213ENST00000506469 GIGYF1O75420 1035 aaPredicted RBP18.46■□□□□ 0.55
YIPF3-213ENST00000506469 SMARCC1Q92922 1105 aaPredicted RBP18.46■□□□□ 0.55
YIPF3-213ENST00000506469 PALLDQ8WX93 1383 aa18.45■□□□□ 0.54
YIPF3-213ENST00000506469 SOS1Q07889 1333 aaPredicted RBP18.45■□□□□ 0.54
YIPF3-213ENST00000506469 RBM42Q9BTD8 480 aaKnown RBP18.45■□□□□ 0.54
YIPF3-213ENST00000506469 PRAMEF22A3QJZ6 481 aa18.44■□□□□ 0.54
YIPF3-213ENST00000506469 HOXB7P09629 217 aa18.44■□□□□ 0.54
YIPF3-213ENST00000506469 SNRPA1P09661 255 aaKnown RBP18.44■□□□□ 0.54
YIPF3-213ENST00000506469 RCAN3Q9UKA8 241 aa18.44■□□□□ 0.54
YIPF3-213ENST00000506469 UBR2Q8IWV8 1755 aa18.43■□□□□ 0.54
YIPF3-213ENST00000506469 VSIG10Q8N0Z9 540 aa18.42■□□□□ 0.54
YIPF3-213ENST00000506469 ZNF428Q96B54 188 aa18.42■□□□□ 0.54
YIPF3-213ENST00000506469 SBF2Q86WG5 1849 aa18.42■□□□□ 0.54
YIPF3-213ENST00000506469 RARSP54136 660 aaKnown RBP18.41■□□□□ 0.54
YIPF3-213ENST00000506469 SLC4A9Q96Q91 983 aa18.41■□□□□ 0.54
YIPF3-213ENST00000506469 LOC102724428A0A0B4J2F2 783 aa18.4■□□□□ 0.54
YIPF3-213ENST00000506469 EIF2S2P20042 333 aaKnown RBP18.4■□□□□ 0.54
YIPF3-213ENST00000506469 SIK1P57059 783 aa18.4■□□□□ 0.54
YIPF3-213ENST00000506469 HDGFL1Q5TGJ6 251 aa18.4■□□□□ 0.54
YIPF3-213ENST00000506469 NECTIN2Q92692 538 aa18.4■□□□□ 0.54
YIPF3-213ENST00000506469 USP16Q9Y5T5 823 aa18.4■□□□□ 0.54
YIPF3-213ENST00000506469 BTAF1O14981 1849 aa18.4■□□□□ 0.54
YIPF3-213ENST00000506469 TCERG1O14776 1098 aaKnown RBP18.4■□□□□ 0.54
YIPF3-213ENST00000506469 ALDH1L2Q3SY69 923 aa18.4■□□□□ 0.54
YIPF3-213ENST00000506469 CCDC30Q5VVM6 783 aa18.39■□□□□ 0.53
YIPF3-213ENST00000506469 DNAJC10Q8IXB1 793 aa18.39■□□□□ 0.53
YIPF3-213ENST00000506469 SSH1Q8WYL5 1049 aa18.39■□□□□ 0.53
YIPF3-213ENST00000506469 BCL2L13Q9BXK5 485 aa18.39■□□□□ 0.53
YIPF3-213ENST00000506469 BCAR3O75815 825 aa18.38■□□□□ 0.53
YIPF3-213ENST00000506469 ATP6V1AP38606 617 aa18.38■□□□□ 0.53
YIPF3-213ENST00000506469 TEX13AQ9BXU3 409 aaPredicted RBP18.38■□□□□ 0.53
YIPF3-213ENST00000506469 CHMP4AQ9BY43 222 aa18.38■□□□□ 0.53
YIPF3-213ENST00000506469 SMC4Q9NTJ3 1288 aa18.38■□□□□ 0.53
YIPF3-213ENST00000506469 APBA3O96018 575 aa18.37■□□□□ 0.53
YIPF3-213ENST00000506469 C5P01031 1676 aa18.37■□□□□ 0.53
YIPF3-213ENST00000506469 ITPK1Q13572 414 aa18.36■□□□□ 0.53
YIPF3-213ENST00000506469 MRPL50Q8N5N7 158 aaKnown RBP18.36■□□□□ 0.53
YIPF3-213ENST00000506469 STK31Q9BXU1 1019 aa18.36■□□□□ 0.53
YIPF3-213ENST00000506469 CHPF2Q9P2E5 772 aa18.35■□□□□ 0.53
YIPF3-213ENST00000506469 CCNL1Q9UK58 526 aaPredicted RBP18.35■□□□□ 0.53
YIPF3-213ENST00000506469 PLSCR1O15162 318 aa18.34■□□□□ 0.53
YIPF3-213ENST00000506469 STARD3NLO95772 234 aa18.34■□□□□ 0.53
YIPF3-213ENST00000506469 SLC4A2P04920 1241 aa18.34■□□□□ 0.53
YIPF3-213ENST00000506469 CYP19A1P11511 503 aaPredicted RBP18.34■□□□□ 0.53
YIPF3-213ENST00000506469 KCNQ4P56696 695 aa18.34■□□□□ 0.53
YIPF3-213ENST00000506469 SUPT16HQ9Y5B9 1047 aaKnown RBP18.34■□□□□ 0.53
YIPF3-213ENST00000506469 KAT6BQ8WYB5 2073 aa18.34■□□□□ 0.53
YIPF3-213ENST00000506469 A1BGP04217 495 aa18.33■□□□□ 0.53
YIPF3-213ENST00000506469 DBF4Q9UBU7 674 aaPredicted RBP18.33■□□□□ 0.53
YIPF3-213ENST00000506469 EP400Q96L91 3159 aa18.33■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms