RNA–Protein interactions for RNA: ENST00000505337.5

DHFR-203, Transcript of dihydrofolate reductase, humanhuman

APPRIS P1 TSL 2 BASIC

Gene DHFR, Length 1,719 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DHFR-203ENST00000505337 USHBP1Q8N6Y0 703 aa31.41■■■□□ 2.62
DHFR-203ENST00000505337 ELL2O00472 640 aaPredicted RBP31.41■■■□□ 2.62
DHFR-203ENST00000505337 TMEM57Q8N5G2 664 aa31.41■■■□□ 2.62
DHFR-203ENST00000505337 KDM3BQ7LBC6 1761 aa31.4■■■□□ 2.62
DHFR-203ENST00000505337 GNAT3A8MTJ3 354 aa31.4■■■□□ 2.62
DHFR-203ENST00000505337 SEPT12Q8IYM1 358 aa31.4■■■□□ 2.62
DHFR-203ENST00000505337 UPF1Q92900 1129 aaKnown RBP eCLIP31.39■■■□□ 2.621e-6■■□□□ 13.6
DHFR-203ENST00000505337 EVA1CP58658 441 aa31.38■■■□□ 2.61
DHFR-203ENST00000505337 ITPRIPQ8IWB1 547 aa31.38■■■□□ 2.61
DHFR-203ENST00000505337 SPATA31A1Q5TZJ5 1347 aa31.38■■■□□ 2.61
DHFR-203ENST00000505337 COL5A2P05997 1499 aaPredicted RBP31.38■■■□□ 2.61
DHFR-203ENST00000505337 FAM98CQ17RN3 349 aaKnown RBP31.38■■■□□ 2.61
DHFR-203ENST00000505337 AXIN2Q9Y2T1 843 aa31.38■■■□□ 2.61
DHFR-203ENST00000505337 LARP1Q6PKG0 1096 aaKnown RBP31.37■■■□□ 2.61
DHFR-203ENST00000505337 ABCC4O15439 1325 aa31.37■■■□□ 2.61
DHFR-203ENST00000505337 KRT24Q2M2I5 525 aa31.35■■■□□ 2.61
DHFR-203ENST00000505337 EP400Q96L91 3159 aa31.35■■■□□ 2.61
DHFR-203ENST00000505337 BRWD3Q6RI45 1802 aa31.34■■■□□ 2.61
DHFR-203ENST00000505337 ADAMTS7Q9UKP4 1686 aa31.34■■■□□ 2.61
DHFR-203ENST00000505337 CEMIPQ8WUJ3 1361 aa31.33■■■□□ 2.61
DHFR-203ENST00000505337 SIPA1L3O60292 1781 aaPredicted RBP31.32■■■□□ 2.61
DHFR-203ENST00000505337 TSPYL4Q9UJ04 414 aa31.32■■■□□ 2.61
DHFR-203ENST00000505337 ANKRD24Q8TF21 1146 aa31.32■■■□□ 2.6
DHFR-203ENST00000505337 ZBTB40Q9NUA8 1239 aa31.32■■■□□ 2.6
DHFR-203ENST00000505337 N4BP2Q86UW6 1770 aaPredicted RBP31.31■■■□□ 2.6
DHFR-203ENST00000505337 PDE4AP27815 886 aa31.31■■■□□ 2.6
DHFR-203ENST00000505337 BACH2Q9BYV9 841 aa31.31■■■□□ 2.6
DHFR-203ENST00000505337 USP35Q9P2H5 1018 aa31.31■■■□□ 2.6
DHFR-203ENST00000505337 IL17REQ8NFR9 667 aa31.3■■■□□ 2.6
DHFR-203ENST00000505337 ERBB3P21860 1342 aa31.29■■■□□ 2.6
DHFR-203ENST00000505337 RWDD1Q9H446 243 aaPredicted RBP31.29■■■□□ 2.6
DHFR-203ENST00000505337 BABAM1Q9NWV8 329 aa31.29■■■□□ 2.6
DHFR-203ENST00000505337 THSD7AQ9UPZ6 1657 aa31.29■■■□□ 2.6
DHFR-203ENST00000505337 API5Q9BZZ5 524 aaKnown RBP31.28■■■□□ 2.6
DHFR-203ENST00000505337 MIS18AQ9NYP9 233 aa31.28■■■□□ 2.6
DHFR-203ENST00000505337 OVOS2A0A0G2JMS6 1433 aa31.27■■■□□ 2.6
DHFR-203ENST00000505337 A0A0G2JS52 829 aa31.27■■■□□ 2.6
DHFR-203ENST00000505337 MYT1Q01538 1121 aa31.27■■■□□ 2.6
DHFR-203ENST00000505337 HDAC1Q13547 482 aaPredicted RBP31.26■■■□□ 2.59
DHFR-203ENST00000505337 BARGINQ6ZT62 677 aa31.25■■■□□ 2.59
DHFR-203ENST00000505337 KRT27Q7Z3Y8 459 aa31.25■■■□□ 2.59
DHFR-203ENST00000505337 WDR17Q8IZU2 1322 aa31.24■■■□□ 2.59
DHFR-203ENST00000505337 SCN11AQ9UI33 1791 aa31.23■■■□□ 2.59
DHFR-203ENST00000505337 PKD1L3Q7Z443 1732 aa31.23■■■□□ 2.59
DHFR-203ENST00000505337 RGS3P49796 1198 aa31.22■■■□□ 2.59
DHFR-203ENST00000505337 SOS1Q07889 1333 aaPredicted RBP31.22■■■□□ 2.59
DHFR-203ENST00000505337 AMOTQ4VCS5 1084 aa31.21■■■□□ 2.59
DHFR-203ENST00000505337 CHMP4BQ9H444 224 aaKnown RBP31.21■■■□□ 2.59
DHFR-203ENST00000505337 THRAP3Q9Y2W1 955 aaKnown RBP31.21■■■□□ 2.59
DHFR-203ENST00000505337 PTPRCP08575 1304 aa31.21■■■□□ 2.59
DHFR-203ENST00000505337 ZBTB7BO15156 539 aaPredicted RBP31.21■■■□□ 2.59
DHFR-203ENST00000505337 TAF7Q15545 349 aaPredicted RBP31.21■■■□□ 2.59
DHFR-203ENST00000505337 TOM1L2Q6ZVM7 507 aa31.21■■■□□ 2.59
DHFR-203ENST00000505337 PLEKHO1Q53GL0 409 aaPredicted RBP31.2■■■□□ 2.58
DHFR-203ENST00000505337 AKAP4Q5JQC9 854 aa31.2■■■□□ 2.58
DHFR-203ENST00000505337 PLEKHG2Q9H7P9 1386 aa31.18■■■□□ 2.58
DHFR-203ENST00000505337 ZNF530Q6P9A1 599 aaPredicted RBP31.18■■■□□ 2.58
DHFR-203ENST00000505337 PDZRN3Q9UPQ7 1066 aa31.16■■■□□ 2.58
DHFR-203ENST00000505337 CSB-PGBD3P0DP91 1061 aa31.15■■■□□ 2.58
DHFR-203ENST00000505337 INTS3Q68E01 1043 aaKnown RBP31.15■■■□□ 2.58
DHFR-203ENST00000505337 FAM161AQ3B820 660 aa31.15■■■□□ 2.58
DHFR-203ENST00000505337 C8orf34Q49A92 452 aa31.14■■■□□ 2.58
DHFR-203ENST00000505337 FAM182BQ5T319 152 aa31.14■■■□□ 2.58
DHFR-203ENST00000505337 CARD10Q9BWT7 1032 aa31.14■■■□□ 2.58
DHFR-203ENST00000505337 SMC5Q8IY18 1101 aa31.13■■■□□ 2.57
DHFR-203ENST00000505337 MEGF6O75095 1541 aa31.13■■■□□ 2.57
DHFR-203ENST00000505337 LGR6Q9HBX8 967 aa31.12■■■□□ 2.57
DHFR-203ENST00000505337 PARP4Q9UKK3 1724 aaKnown RBP31.12■■■□□ 2.57
DHFR-203ENST00000505337 SLC4A2P04920 1241 aa31.11■■■□□ 2.57
DHFR-203ENST00000505337 C1orf141Q5JVX7 400 aa31.1■■■□□ 2.57
DHFR-203ENST00000505337 CCDC125Q86Z20 511 aa31.09■■■□□ 2.57
DHFR-203ENST00000505337 MSH5O43196 834 aa31.08■■■□□ 2.57
DHFR-203ENST00000505337 RNMTO43148 476 aaKnown RBP31.07■■■□□ 2.56
DHFR-203ENST00000505337 CCDC30Q5VVM6 783 aa31.07■■■□□ 2.56
DHFR-203ENST00000505337 ANP32AP39687 249 aaKnown RBP31.07■■■□□ 2.56
DHFR-203ENST00000505337 STK31Q9BXU1 1019 aa31.07■■■□□ 2.56
DHFR-203ENST00000505337 WNK3Q9BYP7 1800 aa31.06■■■□□ 2.56
DHFR-203ENST00000505337 G2E3Q7L622 706 aa31.06■■■□□ 2.56
DHFR-203ENST00000505337 NLRP2Q9NX02 1062 aa31.06■■■□□ 2.56
DHFR-203ENST00000505337 PXDNLA1KZ92 1463 aa31.06■■■□□ 2.56
DHFR-203ENST00000505337 DISP2A7MBM2 1401 aa31.06■■■□□ 2.56
DHFR-203ENST00000505337 ATP10DQ9P241 1426 aa31.06■■■□□ 2.56
DHFR-203ENST00000505337 MPRIPQ6WCQ1 1025 aa31.05■■■□□ 2.56
DHFR-203ENST00000505337 TEFQ10587 303 aa31.04■■■□□ 2.56
DHFR-203ENST00000505337 C1orf115Q9H7X2 142 aa31.04■■■□□ 2.56
DHFR-203ENST00000505337 EIF4A1P60842 406 aaKnown RBP31.04■■■□□ 2.56
DHFR-203ENST00000505337 MRC1P22897 1456 aa31.03■■■□□ 2.56
DHFR-203ENST00000505337 HOXB7P09629 217 aa31.03■■■□□ 2.56
DHFR-203ENST00000505337 RAPGEF4Q8WZA2 1011 aa31.03■■■□□ 2.56
DHFR-203ENST00000505337 KDM6AO15550 1401 aaPredicted RBP31.02■■■□□ 2.56
DHFR-203ENST00000505337 CDCA7Q9BWT1 371 aaPredicted RBP31.01■■■□□ 2.56
DHFR-203ENST00000505337 SIRT2Q8IXJ6 389 aa31.01■■■□□ 2.55
DHFR-203ENST00000505337 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP31.01■■■□□ 2.557e-43■■□□□ 14
DHFR-203ENST00000505337 C5P01031 1676 aa31■■■□□ 2.55
DHFR-203ENST00000505337 DDB1Q16531 1140 aa31■■■□□ 2.55
DHFR-203ENST00000505337 SHANK3Q9BYB0 1731 aa31■■■□□ 2.55
DHFR-203ENST00000505337 FLIIQ13045 1269 aa30.99■■■□□ 2.55
DHFR-203ENST00000505337 FAM196AQ6ZSG2 479 aa30.99■■■□□ 2.55
DHFR-203ENST00000505337 BTBD11A6QL63 1104 aa30.98■■■□□ 2.55
DHFR-203ENST00000505337 TATP17735 454 aaPredicted RBP30.98■■■□□ 2.55
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms