RNA–Protein interactions for RNA: ENST00000504120.3

PCDHA1-203, Transcript of protocadherin alpha 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDHA1, Length 5,263 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA1-203ENST00000504120 IDH1O75874 414 aaKnown RBP19.43■□□□□ 0.7
PCDHA1-203ENST00000504120 BMP2KQ9NSY1 1161 aaPredicted RBP19.42■□□□□ 0.7
PCDHA1-203ENST00000504120 MAP3K11Q16584 847 aa19.42■□□□□ 0.7
PCDHA1-203ENST00000504120 CCDC66A2RUB6 948 aa19.42■□□□□ 0.7
PCDHA1-203ENST00000504120 XPCQ01831 940 aaPredicted RBP19.42■□□□□ 0.7
PCDHA1-203ENST00000504120 LRPPRCP42704 1394 aaKnown RBP19.42■□□□□ 0.7
PCDHA1-203ENST00000504120 TCOF1Q13428 1488 aaKnown RBP19.41■□□□□ 0.7
PCDHA1-203ENST00000504120 WWC2Q6AWC2 1192 aa19.41■□□□□ 0.7
PCDHA1-203ENST00000504120 NSD2O96028 1365 aa19.41■□□□□ 0.7
PCDHA1-203ENST00000504120 ERLIN2O94905 339 aa19.41■□□□□ 0.7
PCDHA1-203ENST00000504120 CEP131Q9UPN4 1083 aa19.41■□□□□ 0.7
PCDHA1-203ENST00000504120 C20orf194Q5TEA3 1177 aa19.41■□□□□ 0.7
PCDHA1-203ENST00000504120 NME9Q86XW9 330 aa19.41■□□□□ 0.7
PCDHA1-203ENST00000504120 TANGO6Q9C0B7 1094 aa19.41■□□□□ 0.7
PCDHA1-203ENST00000504120 ZHX3Q9H4I2 956 aa19.41■□□□□ 0.7
PCDHA1-203ENST00000504120 METTL24Q5JXM2 366 aa19.4■□□□□ 0.7
PCDHA1-203ENST00000504120 SH2B1Q9NRF2 756 aaPredicted RBP19.4■□□□□ 0.7
PCDHA1-203ENST00000504120 CFAP43Q8NDM7 1665 aa19.4■□□□□ 0.7
PCDHA1-203ENST00000504120 NUTM2BA6NNL0 878 aaPredicted RBP19.4■□□□□ 0.7
PCDHA1-203ENST00000504120 NUTM2EB1AL46 878 aaPredicted RBP19.4■□□□□ 0.7
PCDHA1-203ENST00000504120 NUTM2AQ8IVF1 878 aaPredicted RBP19.4■□□□□ 0.7
PCDHA1-203ENST00000504120 PLEKHH1Q9ULM0 1364 aa19.4■□□□□ 0.7
PCDHA1-203ENST00000504120 SCAF11Q99590 1463 aaKnown RBP19.4■□□□□ 0.7
PCDHA1-203ENST00000504120 SMARCA5O60264 1052 aaPredicted RBP19.39■□□□□ 0.7
PCDHA1-203ENST00000504120 H0YHG0 523 aa19.39■□□□□ 0.69
PCDHA1-203ENST00000504120 PRPF40BQ6NWY9 871 aaKnown RBP19.39■□□□□ 0.69
PCDHA1-203ENST00000504120 WDR62O43379 1518 aa19.39■□□□□ 0.69
PCDHA1-203ENST00000504120 DUOX2Q9NRD8 1548 aa19.39■□□□□ 0.69
PCDHA1-203ENST00000504120 AXDND1Q5T1B0 1012 aaPredicted RBP19.39■□□□□ 0.69
PCDHA1-203ENST00000504120 CCDC181Q5TID7 509 aa19.39■□□□□ 0.69
PCDHA1-203ENST00000504120 PTPRKQ15262 1439 aa19.39■□□□□ 0.69
PCDHA1-203ENST00000504120 ERLIN1O75477 346 aa19.39■□□□□ 0.69
PCDHA1-203ENST00000504120 PTPRCP08575 1304 aa19.39■□□□□ 0.69
PCDHA1-203ENST00000504120 ESPNB1AK53 854 aa19.38■□□□□ 0.69
PCDHA1-203ENST00000504120 DDX11Q96FC9 970 aa19.38■□□□□ 0.69
PCDHA1-203ENST00000504120 ADGRF5Q8IZF2 1346 aa19.38■□□□□ 0.69
PCDHA1-203ENST00000504120 WASLO00401 505 aaPredicted RBP19.38■□□□□ 0.69
PCDHA1-203ENST00000504120 HMGB2P26583 209 aaKnown RBP19.38■□□□□ 0.69
PCDHA1-203ENST00000504120 CCDC83Q8IWF9 413 aa19.38■□□□□ 0.69
PCDHA1-203ENST00000504120 LEKR1Q6ZMV7 388 aa19.38■□□□□ 0.69
PCDHA1-203ENST00000504120 SCAND2PQ9GZW5 306 aaPredicted RBP19.38■□□□□ 0.69
PCDHA1-203ENST00000504120 PDCL3Q9H2J4 239 aa19.38■□□□□ 0.69
PCDHA1-203ENST00000504120 EMILIN1Q9Y6C2 1016 aa19.38■□□□□ 0.69
PCDHA1-203ENST00000504120 HMGB1P09429 215 aaKnown RBP19.37■□□□□ 0.69
PCDHA1-203ENST00000504120 MPNDQ8N594 471 aa19.37■□□□□ 0.69
PCDHA1-203ENST00000504120 DNAAF4Q8WXU2 420 aa19.37■□□□□ 0.69
PCDHA1-203ENST00000504120 CCDC85AQ96PX6 553 aaPredicted RBP19.37■□□□□ 0.69
PCDHA1-203ENST00000504120 MYD88Q99836 296 aa19.37■□□□□ 0.69
PCDHA1-203ENST00000504120 RBM5P52756 815 aaKnown RBP eCLIP19.36■□□□□ 0.69
PCDHA1-203ENST00000504120 ZNF652Q9Y2D9 606 aa19.36■□□□□ 0.69
PCDHA1-203ENST00000504120 SYCE3A1L190 88 aa19.36■□□□□ 0.69
PCDHA1-203ENST00000504120 IL27Q8NEV9 243 aa19.36■□□□□ 0.69
PCDHA1-203ENST00000504120 FILIP1Q7Z7B0 1213 aa19.36■□□□□ 0.69
PCDHA1-203ENST00000504120 BOLA2Q9H3K6 86 aa19.36■□□□□ 0.69
PCDHA1-203ENST00000504120 ZNF287Q9HBT7 754 aa19.36■□□□□ 0.69
PCDHA1-203ENST00000504120 TMOD3Q9NYL9 352 aa19.36■□□□□ 0.69
PCDHA1-203ENST00000504120 GOLGA6L10A6NI86 522 aa19.36■□□□□ 0.69
PCDHA1-203ENST00000504120 IFIT1P09914 478 aaKnown RBP19.36■□□□□ 0.69
PCDHA1-203ENST00000504120 HYPKQ9NX55 129 aa19.35■□□□□ 0.69
PCDHA1-203ENST00000504120 KDM5BQ9UGL1 1544 aa19.35■□□□□ 0.69
PCDHA1-203ENST00000504120 RBM10P98175 930 aaKnown RBP19.35■□□□□ 0.69
PCDHA1-203ENST00000504120 CCDC191Q8NCU4 936 aa19.35■□□□□ 0.69
PCDHA1-203ENST00000504120 DBF4Q9UBU7 674 aaPredicted RBP19.35■□□□□ 0.69
PCDHA1-203ENST00000504120 TRIM27P14373 513 aa19.35■□□□□ 0.69
PCDHA1-203ENST00000504120 IQCEQ6IPM2 695 aa19.35■□□□□ 0.69
PCDHA1-203ENST00000504120 ABCF2Q9UG63 623 aa19.35■□□□□ 0.69
PCDHA1-203ENST00000504120 TTC21BQ7Z4L5 1316 aa19.34■□□□□ 0.69
PCDHA1-203ENST00000504120 CCDC196A0A1B0GTZ2 297 aa19.34■□□□□ 0.69
PCDHA1-203ENST00000504120 SSBP05455 408 aaKnown RBP eCLIP19.34■□□□□ 0.69
PCDHA1-203ENST00000504120 IDI1Q13907 227 aa19.34■□□□□ 0.69
PCDHA1-203ENST00000504120 FERMT3Q86UX7 667 aa19.34■□□□□ 0.69
PCDHA1-203ENST00000504120 SPINK5Q9NQ38 1064 aaPredicted RBP19.34■□□□□ 0.69
PCDHA1-203ENST00000504120 KIF21AQ7Z4S6 1674 aa19.34■□□□□ 0.69
PCDHA1-203ENST00000504120 EIF3JO75822 258 aaKnown RBP19.34■□□□□ 0.69
PCDHA1-203ENST00000504120 PHF8Q9UPP1 1060 aa19.34■□□□□ 0.69
PCDHA1-203ENST00000504120 PTCD1O75127 700 aaKnown RBP19.33■□□□□ 0.69
PCDHA1-203ENST00000504120 LRRFIP2Q9Y608 721 aaKnown RBP19.33■□□□□ 0.69
PCDHA1-203ENST00000504120 CCDC183Q5T5S1 534 aa19.33■□□□□ 0.69
PCDHA1-203ENST00000504120 F6X3S4 739 aa19.33■□□□□ 0.68
PCDHA1-203ENST00000504120 SKIDA1Q1XH10 827 aa19.33■□□□□ 0.68
PCDHA1-203ENST00000504120 ZSCAN30Q86W11 494 aa19.33■□□□□ 0.68
PCDHA1-203ENST00000504120 ZSCAN29Q8IWY8 852 aaPredicted RBP19.33■□□□□ 0.68
PCDHA1-203ENST00000504120 FAM177A1Q8N128 213 aaPredicted RBP19.33■□□□□ 0.68
PCDHA1-203ENST00000504120 CAVIN4Q5BKX8 364 aa19.33■□□□□ 0.68
PCDHA1-203ENST00000504120 UQCRHLA0A096LP55 91 aa19.32■□□□□ 0.68
PCDHA1-203ENST00000504120 UQCRHP07919 91 aa19.32■□□□□ 0.68
PCDHA1-203ENST00000504120 C14orf93Q9H972 538 aaKnown RBP19.32■□□□□ 0.68
PCDHA1-203ENST00000504120 MAPKBP1O60336 1514 aa19.32■□□□□ 0.68
PCDHA1-203ENST00000504120 HSP90AB3PQ58FF7 597 aa19.32■□□□□ 0.68
PCDHA1-203ENST00000504120 LIMCH1Q9UPQ0 1083 aa19.32■□□□□ 0.68
PCDHA1-203ENST00000504120 ASXL2Q76L83 1435 aa19.32■□□□□ 0.68
PCDHA1-203ENST00000504120 BICDL1Q6ZP65 573 aa19.32■□□□□ 0.68
PCDHA1-203ENST00000504120 CFAP100Q494V2 611 aa19.32■□□□□ 0.68
PCDHA1-203ENST00000504120 PHF23Q9BUL5 403 aaPredicted RBP19.32■□□□□ 0.68
PCDHA1-203ENST00000504120 ANO10Q9NW15 660 aa19.32■□□□□ 0.68
PCDHA1-203ENST00000504120 IL16Q14005 1332 aa19.32■□□□□ 0.68
PCDHA1-203ENST00000504120 EPB41L2O43491 1005 aaKnown RBP19.31■□□□□ 0.68
PCDHA1-203ENST00000504120 IFIT5Q13325 482 aaKnown RBP19.31■□□□□ 0.68
PCDHA1-203ENST00000504120 NOS1P29475 1434 aa19.31■□□□□ 0.68
PCDHA1-203ENST00000504120 EIF4G3O43432 1585 aaKnown RBP19.31■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 72.6 ms