RNA–Protein interactions for RNA: ENST00000503360.1

HMGB1P35-201, Transcript of high mobility group box 1 pseudogene 35, humanhuman

BASIC

Gene HMGB1P35, Length 598 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P35-201ENST00000503360 C1orf229Q6ZS94 237 aaPredicted RBP5.82□□□□□ -1.48
HMGB1P35-201ENST00000503360 C1QTNF9BB2RNN3 333 aa5.81□□□□□ -1.48
HMGB1P35-201ENST00000503360 FBXO31Q5XUX0 539 aaPredicted RBP5.81□□□□□ -1.48
HMGB1P35-201ENST00000503360 PROCA1Q8NCQ7 364 aaPredicted RBP5.81□□□□□ -1.48
HMGB1P35-201ENST00000503360 ESYT1Q9BSJ8 1104 aa5.81□□□□□ -1.48
HMGB1P35-201ENST00000503360 HMX1Q9NP08 348 aaPredicted RBP5.81□□□□□ -1.48
HMGB1P35-201ENST00000503360 ARAFP10398 606 aa5.8□□□□□ -1.48
HMGB1P35-201ENST00000503360 EPXP11678 715 aa5.8□□□□□ -1.48
HMGB1P35-201ENST00000503360 CD163Q86VB7 1156 aa5.8□□□□□ -1.48
HMGB1P35-201ENST00000503360 TRIM34Q9BYJ4 488 aa5.8□□□□□ -1.48
HMGB1P35-201ENST00000503360 OSBPL3Q9H4L5 887 aa5.8□□□□□ -1.48
HMGB1P35-201ENST00000503360 RRAGCQ9HB90 399 aa5.8□□□□□ -1.48
HMGB1P35-201ENST00000503360 NDFIP2Q9NV92 336 aa5.8□□□□□ -1.48
HMGB1P35-201ENST00000503360 HRH3Q9Y5N1 445 aa5.8□□□□□ -1.48
HMGB1P35-201ENST00000503360 DGKGP49619 791 aa5.79□□□□□ -1.48
HMGB1P35-201ENST00000503360 GRIN2CQ14957 1233 aa5.79□□□□□ -1.48
HMGB1P35-201ENST00000503360 BTBD6Q96KE9 485 aa5.79□□□□□ -1.48
HMGB1P35-201ENST00000503360 CRISPLD1Q9H336 500 aa5.79□□□□□ -1.48
HMGB1P35-201ENST00000503360 AVENQ9NQS1 362 aaPredicted RBP5.79□□□□□ -1.48
HMGB1P35-201ENST00000503360 PCDHB9Q9Y5E1 797 aa5.79□□□□□ -1.48
HMGB1P35-201ENST00000503360 SOCS7O14512 581 aa5.78□□□□□ -1.48
HMGB1P35-201ENST00000503360 CSB-PGBD3P0DP91 1061 aa5.78□□□□□ -1.48
HMGB1P35-201ENST00000503360 TMEM259Q4ZIN3 620 aa5.78□□□□□ -1.48
HMGB1P35-201ENST00000503360 EFHC2Q5JST6 749 aa5.78□□□□□ -1.48
HMGB1P35-201ENST00000503360 PGBD3Q8N328 593 aa5.78□□□□□ -1.48
HMGB1P35-201ENST00000503360 CNKSR1Q969H4 720 aa5.78□□□□□ -1.48
HMGB1P35-201ENST00000503360 XAGE2Q96GT9 111 aa5.78□□□□□ -1.48
HMGB1P35-201ENST00000503360 SLC24A3Q9HC58 644 aa5.78□□□□□ -1.48
HMGB1P35-201ENST00000503360 GOPCQ9HD26 462 aa5.78□□□□□ -1.48
HMGB1P35-201ENST00000503360 ZNF330Q9Y3S2 320 aaPredicted RBP5.78□□□□□ -1.48
HMGB1P35-201ENST00000503360 BMP4P12644 408 aa5.77□□□□□ -1.49
HMGB1P35-201ENST00000503360 ITGB7P26010 798 aa5.77□□□□□ -1.49
HMGB1P35-201ENST00000503360 CENPCQ03188 943 aa5.77□□□□□ -1.49
HMGB1P35-201ENST00000503360 FIGNL1Q6PIW4 674 aa5.77□□□□□ -1.49
HMGB1P35-201ENST00000503360 SUV39H2Q9H5I1 410 aa5.77□□□□□ -1.49
HMGB1P35-201ENST00000503360 ARHGEF10LQ9HCE6 1279 aa5.77□□□□□ -1.49
HMGB1P35-201ENST00000503360 GGA1Q9UJY5 639 aa5.77□□□□□ -1.49
HMGB1P35-201ENST00000503360 C2CD2LO14523 706 aa5.76□□□□□ -1.49
HMGB1P35-201ENST00000503360 FBXO45P0C2W1 286 aa5.76□□□□□ -1.49
HMGB1P35-201ENST00000503360 FGFR3P22607 806 aa5.76□□□□□ -1.49
HMGB1P35-201ENST00000503360 AMPD1P23109 780 aa5.76□□□□□ -1.49
HMGB1P35-201ENST00000503360 GTF2E1P29083 439 aaPredicted RBP5.76□□□□□ -1.49
HMGB1P35-201ENST00000503360 RFC5P40937 340 aa5.76□□□□□ -1.49
HMGB1P35-201ENST00000503360 SCTRP47872 440 aa5.76□□□□□ -1.49
HMGB1P35-201ENST00000503360 GNASQ5JWF2 1037 aa5.76□□□□□ -1.49
HMGB1P35-201ENST00000503360 FAM182BQ5T319 152 aa5.76□□□□□ -1.49
HMGB1P35-201ENST00000503360 RNF135Q8IUD6 432 aa5.76□□□□□ -1.49
HMGB1P35-201ENST00000503360 C1orf216Q8TAB5 229 aa5.76□□□□□ -1.49
HMGB1P35-201ENST00000503360 ZSCAN10Q96SZ4 725 aaPredicted RBP5.76□□□□□ -1.49
HMGB1P35-201ENST00000503360 FHDC1Q9C0D6 1143 aaPredicted RBP5.76□□□□□ -1.49
HMGB1P35-201ENST00000503360 ESF1Q9H501 851 aaKnown RBP5.76□□□□□ -1.49
HMGB1P35-201ENST00000503360 IL2RAP01589 272 aa5.75□□□□□ -1.49
HMGB1P35-201ENST00000503360 CHRNA4P43681 627 aa5.75□□□□□ -1.49
HMGB1P35-201ENST00000503360 NR1H3Q13133 447 aa5.75□□□□□ -1.49
HMGB1P35-201ENST00000503360 MSX1P28360 303 aa5.74□□□□□ -1.49
HMGB1P35-201ENST00000503360 ESCO1Q5FWF5 840 aa5.74□□□□□ -1.49
HMGB1P35-201ENST00000503360 ZMYM1Q5SVZ6 1142 aa5.74□□□□□ -1.49
HMGB1P35-201ENST00000503360 NLRP8Q86W28 1048 aa5.74□□□□□ -1.49
HMGB1P35-201ENST00000503360 KRTAP1-3Q8IUG1 177 aa5.74□□□□□ -1.49
HMGB1P35-201ENST00000503360 GJD4Q96KN9 370 aaPredicted RBP5.74□□□□□ -1.49
HMGB1P35-201ENST00000503360 GPAMQ9HCL2 828 aa5.74□□□□□ -1.49
HMGB1P35-201ENST00000503360 PCDHB11Q9Y5F2 797 aa5.74□□□□□ -1.49
HMGB1P35-201ENST00000503360 BNIP3LO60238 219 aa5.73□□□□□ -1.49
HMGB1P35-201ENST00000503360 SPATA31C1P0DKV0 1188 aa5.73□□□□□ -1.49
HMGB1P35-201ENST00000503360 C4orf17Q53FE4 359 aa5.73□□□□□ -1.49
HMGB1P35-201ENST00000503360 PPARGC1BQ86YN6 1023 aaKnown RBP5.73□□□□□ -1.49
HMGB1P35-201ENST00000503360 SEMA6BQ9H3T3 888 aa5.73□□□□□ -1.49
HMGB1P35-201ENST00000503360 PCDHGC4Q9Y5F7 938 aa5.73□□□□□ -1.49
HMGB1P35-201ENST00000503360 MYCP01106 439 aaPredicted RBP5.72□□□□□ -1.49
HMGB1P35-201ENST00000503360 ADH6P28332 368 aa5.72□□□□□ -1.49
HMGB1P35-201ENST00000503360 GATA4P43694 442 aa5.72□□□□□ -1.49
HMGB1P35-201ENST00000503360 CTBSQ01459 385 aa5.72□□□□□ -1.49
HMGB1P35-201ENST00000503360 TMEM214Q6NUQ4 689 aaKnown RBP5.72□□□□□ -1.49
HMGB1P35-201ENST00000503360 RHBDD1Q8TEB9 315 aa5.72□□□□□ -1.49
HMGB1P35-201ENST00000503360 ABHD17AQ96GS6 310 aa5.72□□□□□ -1.49
HMGB1P35-201ENST00000503360 BCANQ96GW7 911 aa5.72□□□□□ -1.49
HMGB1P35-201ENST00000503360 KRTAP4-12Q9BQ66 201 aa5.72□□□□□ -1.49
HMGB1P35-201ENST00000503360 KDM4CQ9H3R0 1056 aa5.72□□□□□ -1.49
HMGB1P35-201ENST00000503360 SPDYE3A6NKU9 549 aa5.71□□□□□ -1.5
HMGB1P35-201ENST00000503360 CHSY3Q70JA7 882 aa5.71□□□□□ -1.5
HMGB1P35-201ENST00000503360 FAM117AQ9C073 453 aa5.71□□□□□ -1.5
HMGB1P35-201ENST00000503360 RUBCNLQ9H714 662 aa5.71□□□□□ -1.5
HMGB1P35-201ENST00000503360 DNAAF2Q9NVR5 837 aaKnown RBP5.71□□□□□ -1.5
HMGB1P35-201ENST00000503360 PHKA2P46019 1235 aa5.7□□□□□ -1.5
HMGB1P35-201ENST00000503360 DOC2BQ14184 412 aa5.7□□□□□ -1.5
HMGB1P35-201ENST00000503360 RSPO4Q2I0M5 234 aaPredicted RBP5.7□□□□□ -1.5
HMGB1P35-201ENST00000503360 NKAPLQ5M9Q1 402 aa5.7□□□□□ -1.5
HMGB1P35-201ENST00000503360 ARTNQ5T4W7 220 aa5.7□□□□□ -1.5
HMGB1P35-201ENST00000503360 ATP1B4Q9UN42 357 aaPredicted RBP5.7□□□□□ -1.5
HMGB1P35-201ENST00000503360 NEURL1BA8MQ27 555 aa5.69□□□□□ -1.5
HMGB1P35-201ENST00000503360 ZCCHC2Q9C0B9 1178 aaKnown RBP5.69□□□□□ -1.5
HMGB1P35-201ENST00000503360 RAB6BQ9NRW1 208 aa5.69□□□□□ -1.5
HMGB1P35-201ENST00000503360 LAMC2Q13753 1193 aa5.68□□□□□ -1.5
HMGB1P35-201ENST00000503360 LCE3BQ5TA77 95 aa5.68□□□□□ -1.5
HMGB1P35-201ENST00000503360 TBC1D9Q6ZT07 1266 aa5.68□□□□□ -1.5
HMGB1P35-201ENST00000503360 TNP2Q05952 138 aa5.67□□□□□ -1.5
HMGB1P35-201ENST00000503360 USP4Q13107 963 aa5.67□□□□□ -1.5
HMGB1P35-201ENST00000503360 ZNF468Q5VIY5 522 aaPredicted RBP5.67□□□□□ -1.5
HMGB1P35-201ENST00000503360 FCHSD1Q86WN1 690 aa5.67□□□□□ -1.5
HMGB1P35-201ENST00000503360 BANK1Q8NDB2 785 aa5.67□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms