RNA–Protein interactions for RNA: ENST00000503291.5

CDC42SE2-206, Transcript of CDC42 small effector 2, humanhuman

TSL 1 (best) BASIC

Gene CDC42SE2, Length 2,025 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-206ENST00000503291 RGS12O14924 1447 aa26.56■■□□□ 1.84
CDC42SE2-206ENST00000503291 TRMT2AQ8IZ69 625 aaKnown RBP26.56■■□□□ 1.84
CDC42SE2-206ENST00000503291 MYH16Q9H6N6 1097 aa26.56■■□□□ 1.84
CDC42SE2-206ENST00000503291 TOGARAM1Q9Y4F4 1720 aa26.55■■□□□ 1.84
CDC42SE2-206ENST00000503291 KAT6BQ8WYB5 2073 aa26.55■■□□□ 1.84
CDC42SE2-206ENST00000503291 TSR2Q969E8 191 aaKnown RBP26.55■■□□□ 1.84
CDC42SE2-206ENST00000503291 PRIM1P49642 420 aaKnown RBP26.54■■□□□ 1.84
CDC42SE2-206ENST00000503291 DUSP27Q5VZP5 1158 aa26.54■■□□□ 1.84
CDC42SE2-206ENST00000503291 ACSBG1Q96GR2 724 aa26.54■■□□□ 1.84
CDC42SE2-206ENST00000503291 MBIPQ9NS73 344 aa26.54■■□□□ 1.84
CDC42SE2-206ENST00000503291 MRC1P22897 1456 aa26.54■■□□□ 1.84
CDC42SE2-206ENST00000503291 BTBD11A6QL63 1104 aa26.53■■□□□ 1.84
CDC42SE2-206ENST00000503291 SYTL4Q96C24 671 aaPredicted RBP26.53■■□□□ 1.84
CDC42SE2-206ENST00000503291 BABAM1Q9NWV8 329 aa26.53■■□□□ 1.84
CDC42SE2-206ENST00000503291 TMOD3Q9NYL9 352 aa26.53■■□□□ 1.84
CDC42SE2-206ENST00000503291 TSPYL4Q9UJ04 414 aa26.53■■□□□ 1.84
CDC42SE2-206ENST00000503291 FANCIQ9NVI1 1328 aa26.52■■□□□ 1.84
CDC42SE2-206ENST00000503291 SIPA1L3O60292 1781 aaPredicted RBP26.52■■□□□ 1.84
CDC42SE2-206ENST00000503291 DOT1LQ8TEK3 1739 aa26.51■■□□□ 1.83
CDC42SE2-206ENST00000503291 BCL9O00512 1426 aa26.51■■□□□ 1.83
CDC42SE2-206ENST00000503291 PIGBQ92521 554 aa26.5■■□□□ 1.83
CDC42SE2-206ENST00000503291 ITGB4P16144 1822 aa26.49■■□□□ 1.83
CDC42SE2-206ENST00000503291 KCNQ2O43526 872 aa26.49■■□□□ 1.83
CDC42SE2-206ENST00000503291 FAM196AQ6ZSG2 479 aa26.48■■□□□ 1.83
CDC42SE2-206ENST00000503291 SLC39A6Q13433 755 aa26.48■■□□□ 1.83
CDC42SE2-206ENST00000503291 KCNQ3O43525 872 aa26.47■■□□□ 1.83
CDC42SE2-206ENST00000503291 ZNF790Q6PG37 636 aa26.46■■□□□ 1.83
CDC42SE2-206ENST00000503291 EXOSC9Q06265 439 aaKnown RBP26.44■■□□□ 1.82
CDC42SE2-206ENST00000503291 EP400Q96L91 3159 aa26.44■■□□□ 1.82
CDC42SE2-206ENST00000503291 PTF1AQ7RTS3 328 aa26.43■■□□□ 1.82
CDC42SE2-206ENST00000503291 KDM3BQ7LBC6 1761 aa26.43■■□□□ 1.82
CDC42SE2-206ENST00000503291 TTC5Q8N0Z6 440 aa26.43■■□□□ 1.82
CDC42SE2-206ENST00000503291 ASAP1Q9ULH1 1129 aa26.43■■□□□ 1.82
CDC42SE2-206ENST00000503291 EIF4A1P60842 406 aaKnown RBP26.42■■□□□ 1.82
CDC42SE2-206ENST00000503291 ATG3Q9NT62 314 aa26.42■■□□□ 1.82
CDC42SE2-206ENST00000503291 KRT24Q2M2I5 525 aa26.41■■□□□ 1.82
CDC42SE2-206ENST00000503291 SBF2Q86WG5 1849 aa26.41■■□□□ 1.82
CDC42SE2-206ENST00000503291 C8orf58Q8NAV2 365 aa26.41■■□□□ 1.82
CDC42SE2-206ENST00000503291 ELL2O00472 640 aaPredicted RBP26.39■■□□□ 1.82
CDC42SE2-206ENST00000503291 CENPBP07199 599 aaPredicted RBP26.39■■□□□ 1.82
CDC42SE2-206ENST00000503291 TSPYL6Q8N831 410 aa26.39■■□□□ 1.81
CDC42SE2-206ENST00000503291 NHSQ6T4R5 1651 aa26.38■■□□□ 1.81
CDC42SE2-206ENST00000503291 ZNF496Q96IT1 587 aaPredicted RBP26.38■■□□□ 1.81
CDC42SE2-206ENST00000503291 BCL11BQ9C0K0 894 aaPredicted RBP26.38■■□□□ 1.81
CDC42SE2-206ENST00000503291 TRIM37O94972 964 aa26.37■■□□□ 1.81
CDC42SE2-206ENST00000503291 PAPPAQ13219 1627 aa26.37■■□□□ 1.81
CDC42SE2-206ENST00000503291 PTCD1O75127 700 aaKnown RBP26.36■■□□□ 1.81
CDC42SE2-206ENST00000503291 TWISTNBQ3B726 338 aaPredicted RBP26.36■■□□□ 1.81
CDC42SE2-206ENST00000503291 FMNL2Q96PY5 1086 aa26.36■■□□□ 1.81
CDC42SE2-206ENST00000503291 HEG1Q9ULI3 1381 aa26.35■■□□□ 1.81
CDC42SE2-206ENST00000503291 VAMP4O75379 141 aa26.34■■□□□ 1.81
CDC42SE2-206ENST00000503291 GIGYF1O75420 1035 aaPredicted RBP26.33■■□□□ 1.81
CDC42SE2-206ENST00000503291 SMARCC1Q92922 1105 aaPredicted RBP26.33■■□□□ 1.81
CDC42SE2-206ENST00000503291 BTAF1O14981 1849 aa26.33■■□□□ 1.81
CDC42SE2-206ENST00000503291 KCPQ6ZWJ8 1503 aa26.33■■□□□ 1.8
CDC42SE2-206ENST00000503291 RBM42Q9BTD8 480 aaKnown RBP26.32■■□□□ 1.8
CDC42SE2-206ENST00000503291 UBR2Q8IWV8 1755 aa26.32■■□□□ 1.8
CDC42SE2-206ENST00000503291 CT47B1P0C2W7 299 aaPredicted RBP26.32■■□□□ 1.8
CDC42SE2-206ENST00000503291 PALLDQ8WX93 1383 aa26.31■■□□□ 1.8
CDC42SE2-206ENST00000503291 PRAMEF22A3QJZ6 481 aa26.31■■□□□ 1.8
CDC42SE2-206ENST00000503291 SNRPA1P09661 255 aaKnown RBP26.3■■□□□ 1.8
CDC42SE2-206ENST00000503291 SOS1Q07889 1333 aaPredicted RBP26.28■■□□□ 1.8
CDC42SE2-206ENST00000503291 HOXB7P09629 217 aa26.28■■□□□ 1.8
CDC42SE2-206ENST00000503291 SLC4A9Q96Q91 983 aa26.28■■□□□ 1.8
CDC42SE2-206ENST00000503291 RCAN3Q9UKA8 241 aa26.28■■□□□ 1.8
CDC42SE2-206ENST00000503291 VSIG10Q8N0Z9 540 aa26.27■■□□□ 1.8
CDC42SE2-206ENST00000503291 LOC102724428A0A0B4J2F2 783 aa26.27■■□□□ 1.8
CDC42SE2-206ENST00000503291 SIK1P57059 783 aa26.27■■□□□ 1.8
CDC42SE2-206ENST00000503291 EIF2S2P20042 333 aaKnown RBP26.26■■□□□ 1.79
CDC42SE2-206ENST00000503291 USP16Q9Y5T5 823 aa26.26■■□□□ 1.79
CDC42SE2-206ENST00000503291 ZNF428Q96B54 188 aa26.26■■□□□ 1.79
CDC42SE2-206ENST00000503291 RARSP54136 660 aaKnown RBP26.25■■□□□ 1.79
CDC42SE2-206ENST00000503291 NECTIN2Q92692 538 aa26.25■■□□□ 1.79
CDC42SE2-206ENST00000503291 HDGFL1Q5TGJ6 251 aa26.24■■□□□ 1.79
CDC42SE2-206ENST00000503291 TCERG1O14776 1098 aaKnown RBP26.23■■□□□ 1.79
CDC42SE2-206ENST00000503291 APBA3O96018 575 aa26.23■■□□□ 1.79
CDC42SE2-206ENST00000503291 ATP6V1AP38606 617 aa26.23■■□□□ 1.79
CDC42SE2-206ENST00000503291 C5P01031 1676 aa26.23■■□□□ 1.79
CDC42SE2-206ENST00000503291 CCDC30Q5VVM6 783 aa26.22■■□□□ 1.79
CDC42SE2-206ENST00000503291 DNAJC10Q8IXB1 793 aa26.22■■□□□ 1.79
CDC42SE2-206ENST00000503291 SSH1Q8WYL5 1049 aa26.22■■□□□ 1.79
CDC42SE2-206ENST00000503291 TEX13AQ9BXU3 409 aaPredicted RBP26.22■■□□□ 1.79
CDC42SE2-206ENST00000503291 BCL2L13Q9BXK5 485 aa26.22■■□□□ 1.79
CDC42SE2-206ENST00000503291 CHMP4AQ9BY43 222 aa26.21■■□□□ 1.79
CDC42SE2-206ENST00000503291 ALDH1L2Q3SY69 923 aa26.21■■□□□ 1.79
CDC42SE2-206ENST00000503291 BCAR3O75815 825 aa26.2■■□□□ 1.78
CDC42SE2-206ENST00000503291 KCNQ4P56696 695 aa26.19■■□□□ 1.78
CDC42SE2-206ENST00000503291 PLSCR1O15162 318 aa26.19■■□□□ 1.78
CDC42SE2-206ENST00000503291 ITPK1Q13572 414 aa26.19■■□□□ 1.78
CDC42SE2-206ENST00000503291 SMC4Q9NTJ3 1288 aa26.19■■□□□ 1.78
CDC42SE2-206ENST00000503291 CCNL1Q9UK58 526 aaPredicted RBP26.19■■□□□ 1.78
CDC42SE2-206ENST00000503291 LY75O60449 1722 aa26.18■■□□□ 1.78
CDC42SE2-206ENST00000503291 STARD3NLO95772 234 aa26.18■■□□□ 1.78
CDC42SE2-206ENST00000503291 STK31Q9BXU1 1019 aa26.17■■□□□ 1.78
CDC42SE2-206ENST00000503291 TNS1Q9HBL0 1735 aaKnown RBP26.17■■□□□ 1.78
CDC42SE2-206ENST00000503291 SLC4A2P04920 1241 aa26.17■■□□□ 1.78
CDC42SE2-206ENST00000503291 CYP19A1P11511 503 aaPredicted RBP26.17■■□□□ 1.78
CDC42SE2-206ENST00000503291 CHPF2Q9P2E5 772 aa26.17■■□□□ 1.78
CDC42SE2-206ENST00000503291 MRPL50Q8N5N7 158 aaKnown RBP26.15■■□□□ 1.78
CDC42SE2-206ENST00000503291 DBF4Q9UBU7 674 aaPredicted RBP26.15■■□□□ 1.78
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms