RNA–Protein interactions for RNA: ENST00000502313.1

HMGB1P21-201, Transcript of high mobility group box 1 pseudogene 21, humanhuman

BASIC

Gene HMGB1P21, Length 581 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P21-201ENST00000502313 C1QTNF2Q9BXJ5 285 aa6.15□□□□□ -1.42
HMGB1P21-201ENST00000502313 BCL11AQ9H165 835 aa6.15□□□□□ -1.42
HMGB1P21-201ENST00000502313 MARCH6O60337 910 aa6.14□□□□□ -1.43
HMGB1P21-201ENST00000502313 RECKO95980 971 aa6.14□□□□□ -1.43
HMGB1P21-201ENST00000502313 VAMP1P23763 118 aa6.14□□□□□ -1.43
HMGB1P21-201ENST00000502313 WNT7BP56706 349 aa6.14□□□□□ -1.43
HMGB1P21-201ENST00000502313 SH3BP2P78314 561 aa6.14□□□□□ -1.43
HMGB1P21-201ENST00000502313 DHX9Q08211 1270 aaKnown RBP6.14□□□□□ -1.43
HMGB1P21-201ENST00000502313 SFI1A8K8P3 1242 aa6.13□□□□□ -1.43
HMGB1P21-201ENST00000502313 ESPNB1AK53 854 aa6.13□□□□□ -1.43
HMGB1P21-201ENST00000502313 SCNN1AP37088 669 aa6.13□□□□□ -1.43
HMGB1P21-201ENST00000502313 TSGA10IPQ3SY00 556 aa6.13□□□□□ -1.43
HMGB1P21-201ENST00000502313 C4orf48Q5BLP8 95 aa6.13□□□□□ -1.43
HMGB1P21-201ENST00000502313 GLYCTKQ8IVS8 523 aa6.13□□□□□ -1.43
HMGB1P21-201ENST00000502313 ANKLE1Q8NAG6 615 aa6.13□□□□□ -1.43
HMGB1P21-201ENST00000502313 PRIMPOLQ96LW4 560 aa6.13□□□□□ -1.43
HMGB1P21-201ENST00000502313 HCSTQ9UBK5 93 aa6.13□□□□□ -1.43
HMGB1P21-201ENST00000502313 KIAA1024Q9UPX6 916 aa6.13□□□□□ -1.43
HMGB1P21-201ENST00000502313 CUX2O14529 1486 aa6.13□□□□□ -1.43
HMGB1P21-201ENST00000502313 THOC2Q8NI27 1593 aaKnown RBP6.13□□□□□ -1.43
HMGB1P21-201ENST00000502313 PPEF1O14829 653 aaPredicted RBP6.12□□□□□ -1.43
HMGB1P21-201ENST00000502313 BACH1O14867 736 aa6.12□□□□□ -1.43
HMGB1P21-201ENST00000502313 CD2BP2O95400 341 aaKnown RBP6.12□□□□□ -1.43
HMGB1P21-201ENST00000502313 FSHRP23945 695 aa6.12□□□□□ -1.43
HMGB1P21-201ENST00000502313 TSNAXIP1Q2TAA8 658 aa6.12□□□□□ -1.43
HMGB1P21-201ENST00000502313 C9orf131Q5VYM1 1079 aa6.12□□□□□ -1.43
HMGB1P21-201ENST00000502313 TMED8Q6PL24 325 aaPredicted RBP6.12□□□□□ -1.43
HMGB1P21-201ENST00000502313 CXXC1Q9P0U4 656 aaPredicted RBP6.12□□□□□ -1.43
HMGB1P21-201ENST00000502313 MAP4K5Q9Y4K4 846 aa6.12□□□□□ -1.43
HMGB1P21-201ENST00000502313 H3BRB1 525 aa6.11□□□□□ -1.43
HMGB1P21-201ENST00000502313 ERCC5P28715 1186 aaPredicted RBP6.11□□□□□ -1.43
HMGB1P21-201ENST00000502313 FAM69CQ0P6D2 419 aa6.11□□□□□ -1.43
HMGB1P21-201ENST00000502313 INTS6LQ5JSJ4 861 aaKnown RBP6.11□□□□□ -1.43
HMGB1P21-201ENST00000502313 CC2D2BQ6DHV5 1058 aa6.11□□□□□ -1.43
HMGB1P21-201ENST00000502313 C1orf216Q8TAB5 229 aa6.11□□□□□ -1.43
HMGB1P21-201ENST00000502313 ZNF526Q8TF50 670 aaPredicted RBP6.11□□□□□ -1.43
HMGB1P21-201ENST00000502313 PSMD1Q99460 953 aa6.11□□□□□ -1.43
HMGB1P21-201ENST00000502313 TUT1Q9H6E5 874 aaKnown RBP6.11□□□□□ -1.43
HMGB1P21-201ENST00000502313 CCDC88BA6NC98 1476 aa6.1□□□□□ -1.43
HMGB1P21-201ENST00000502313 RNF223E7ERA6 249 aa6.1□□□□□ -1.43
HMGB1P21-201ENST00000502313 PTCD1O75127 700 aaKnown RBP6.1□□□□□ -1.43
HMGB1P21-201ENST00000502313 RPIAP49247 311 aa6.1□□□□□ -1.43
HMGB1P21-201ENST00000502313 CYP2U1Q7Z449 544 aa6.1□□□□□ -1.43
HMGB1P21-201ENST00000502313 FBXO33Q7Z6M2 555 aa6.1□□□□□ -1.43
HMGB1P21-201ENST00000502313 MKNK1Q9BUB5 465 aa6.1□□□□□ -1.43
HMGB1P21-201ENST00000502313 UTP3Q9NQZ2 479 aaKnown RBP eCLIP6.1□□□□□ -1.43
HMGB1P21-201ENST00000502313 CHMP3Q9Y3E7 222 aa6.1□□□□□ -1.43
HMGB1P21-201ENST00000502313 PCDHGA11Q9Y5H2 935 aa6.1□□□□□ -1.43
HMGB1P21-201ENST00000502313 PDS5BQ9NTI5 1447 aa6.09□□□□□ -1.43
HMGB1P21-201ENST00000502313 M0R2N6 131 aa6.09□□□□□ -1.43
HMGB1P21-201ENST00000502313 ERVH48-1M5A8F1 160 aa6.09□□□□□ -1.43
HMGB1P21-201ENST00000502313 ZBTB7BO15156 539 aaPredicted RBP6.09□□□□□ -1.43
HMGB1P21-201ENST00000502313 ESCO1Q5FWF5 840 aa6.09□□□□□ -1.43
HMGB1P21-201ENST00000502313 TSEN2Q8NCE0 465 aaKnown RBP6.09□□□□□ -1.43
HMGB1P21-201ENST00000502313 DNAJC2Q99543 621 aaKnown RBP6.09□□□□□ -1.43
HMGB1P21-201ENST00000502313 CYLDQ9NQC7 956 aa6.09□□□□□ -1.43
HMGB1P21-201ENST00000502313 PGPEP1Q9NXJ5 209 aa6.09□□□□□ -1.43
HMGB1P21-201ENST00000502313 EGFL7Q9UHF1 273 aa6.09□□□□□ -1.43
HMGB1P21-201ENST00000502313 SBNO2Q9Y2G9 1366 aa6.08□□□□□ -1.44
HMGB1P21-201ENST00000502313 LGR5O75473 907 aa6.08□□□□□ -1.44
HMGB1P21-201ENST00000502313 ZNF211Q13398 564 aaPredicted RBP6.08□□□□□ -1.44
HMGB1P21-201ENST00000502313 SERBP1Q8NC51 408 aaKnown RBP eCLIP6.08□□□□□ -1.44
HMGB1P21-201ENST00000502313 BACH2Q9BYV9 841 aa6.08□□□□□ -1.44
HMGB1P21-201ENST00000502313 LNPKQ9C0E8 428 aa6.08□□□□□ -1.44
HMGB1P21-201ENST00000502313 EIF4ENIF1Q9NRA8 985 aaKnown RBP6.08□□□□□ -1.44
HMGB1P21-201ENST00000502313 WDR62O43379 1518 aa6.08□□□□□ -1.44
HMGB1P21-201ENST00000502313 ITGBL1O95965 494 aaPredicted RBP6.07□□□□□ -1.44
HMGB1P21-201ENST00000502313 MAPK1P28482 360 aa6.07□□□□□ -1.44
HMGB1P21-201ENST00000502313 GDF10P55107 478 aa6.07□□□□□ -1.44
HMGB1P21-201ENST00000502313 ERVK-9P63128 1117 aa6.07□□□□□ -1.44
HMGB1P21-201ENST00000502313 HDLBPQ00341 1268 aaKnown RBP6.07□□□□□ -1.44
HMGB1P21-201ENST00000502313 SF3B2Q13435 895 aaKnown RBP6.07□□□□□ -1.44
HMGB1P21-201ENST00000502313 RC3H1Q5TC82 1133 aaKnown RBP6.07□□□□□ -1.44
HMGB1P21-201ENST00000502313 CCDC116Q8IYX3 515 aa6.07□□□□□ -1.44
HMGB1P21-201ENST00000502313 MICAL1Q8TDZ2 1067 aa6.07□□□□□ -1.44
HMGB1P21-201ENST00000502313 CHMP7Q8WUX9 453 aaPredicted RBP6.07□□□□□ -1.44
HMGB1P21-201ENST00000502313 ANO2Q9NQ90 1003 aa6.07□□□□□ -1.44
HMGB1P21-201ENST00000502313 ZNF358Q9NW07 568 aa6.07□□□□□ -1.44
HMGB1P21-201ENST00000502313 WDR3Q9UNX4 943 aaKnown RBP eCLIP6.07□□□□□ -1.44
HMGB1P21-201ENST00000502313 FOXO3O43524 673 aa6.06□□□□□ -1.44
HMGB1P21-201ENST00000502313 C21orf2O43822 256 aa6.06□□□□□ -1.44
HMGB1P21-201ENST00000502313 RAB11FIP3O75154 756 aa6.06□□□□□ -1.44
HMGB1P21-201ENST00000502313 SCTRP47872 440 aa6.06□□□□□ -1.44
HMGB1P21-201ENST00000502313 OCLNQ16625 522 aa6.06□□□□□ -1.44
HMGB1P21-201ENST00000502313 TAS1R3Q7RTX0 852 aa6.06□□□□□ -1.44
HMGB1P21-201ENST00000502313 ZSCAN29Q8IWY8 852 aaPredicted RBP6.06□□□□□ -1.44
HMGB1P21-201ENST00000502313 GTF3C2Q8WUA4 911 aaPredicted RBP6.06□□□□□ -1.44
HMGB1P21-201ENST00000502313 PIK3R5Q8WYR1 880 aa6.06□□□□□ -1.44
HMGB1P21-201ENST00000502313 DHX38Q92620 1227 aaKnown RBP6.06□□□□□ -1.44
HMGB1P21-201ENST00000502313 TANGO6Q9C0B7 1094 aa6.06□□□□□ -1.44
HMGB1P21-201ENST00000502313 SERTAD1Q9UHV2 236 aa6.06□□□□□ -1.44
HMGB1P21-201ENST00000502313 TLL2Q9Y6L7 1015 aa6.06□□□□□ -1.44
HMGB1P21-201ENST00000502313 KIF21AQ7Z4S6 1674 aa6.06□□□□□ -1.44
HMGB1P21-201ENST00000502313 ERCC6Q03468 1493 aa6.05□□□□□ -1.44
HMGB1P21-201ENST00000502313 FANCD2Q9BXW9 1451 aa6.05□□□□□ -1.44
HMGB1P21-201ENST00000502313 MRC2Q9UBG0 1479 aa6.05□□□□□ -1.44
HMGB1P21-201ENST00000502313 LOC102724159A0A0B4J2E5 919 aa6.05□□□□□ -1.44
HMGB1P21-201ENST00000502313 ICMTO60725 284 aa6.05□□□□□ -1.44
HMGB1P21-201ENST00000502313 ADH1CP00326 375 aa6.05□□□□□ -1.44
HMGB1P21-201ENST00000502313 IGFBP4P22692 258 aa6.05□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms