RNA–Protein interactions for RNA: ENST00000498627.1

PUM1-212, Transcript of pumilio RNA binding family member 1, humanhuman

TSL 2

Gene PUM1, Length 422 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PUM1-212ENST00000498627 NBPF14Q5TI25 921 aa10.9□□□□□ -0.66
PUM1-212ENST00000498627 SULT6B1Q6IMI4 303 aa10.9□□□□□ -0.66
PUM1-212ENST00000498627 CFAP53Q96M91 514 aa10.9□□□□□ -0.66
PUM1-212ENST00000498627 PPP1R1BQ9UD71 204 aaPredicted RBP10.9□□□□□ -0.66
PUM1-212ENST00000498627 THRAP3Q9Y2W1 955 aaKnown RBP10.9□□□□□ -0.66
PUM1-212ENST00000498627 C1QTNF8P60827 252 aa10.89□□□□□ -0.67
PUM1-212ENST00000498627 EN1Q05925 392 aaPredicted RBP10.89□□□□□ -0.67
PUM1-212ENST00000498627 DIEXFQ68CQ4 756 aaKnown RBP10.89□□□□□ -0.67
PUM1-212ENST00000498627 SPON1Q9HCB6 807 aa10.89□□□□□ -0.67
PUM1-212ENST00000498627 MEGF6O75095 1541 aa10.89□□□□□ -0.67
PUM1-212ENST00000498627 IGSF1Q8N6C5 1336 aa10.88□□□□□ -0.67
PUM1-212ENST00000498627 EXOC5O00471 708 aa10.88□□□□□ -0.67
PUM1-212ENST00000498627 DDB1Q16531 1140 aa10.88□□□□□ -0.67
PUM1-212ENST00000498627 DDX54Q8TDD1 881 aaKnown RBP10.88□□□□□ -0.67
PUM1-212ENST00000498627 RAPGEF4Q8WZA2 1011 aa10.88□□□□□ -0.67
PUM1-212ENST00000498627 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.88□□□□□ -0.67
PUM1-212ENST00000498627 FAM208AQ9UK61 1670 aaKnown RBP10.88□□□□□ -0.67
PUM1-212ENST00000498627 GABBR2O75899 941 aa10.87□□□□□ -0.67
PUM1-212ENST00000498627 U2AF1L5P0DN76 240 aaPredicted RBP10.87□□□□□ -0.67
PUM1-212ENST00000498627 TATP17735 454 aaPredicted RBP10.87□□□□□ -0.67
PUM1-212ENST00000498627 TIE1P35590 1138 aa10.87□□□□□ -0.67
PUM1-212ENST00000498627 PLCB2Q00722 1185 aa10.87□□□□□ -0.67
PUM1-212ENST00000498627 U2AF1Q01081 240 aaKnown RBP eCLIP10.87□□□□□ -0.673e-8■□□□□ 10.1
PUM1-212ENST00000498627 PDE3BQ13370 1112 aa10.87□□□□□ -0.67
PUM1-212ENST00000498627 NKX1-1Q15270 411 aaPredicted RBP10.87□□□□□ -0.67
PUM1-212ENST00000498627 MARCH10Q8NA82 808 aaPredicted RBP10.87□□□□□ -0.67
PUM1-212ENST00000498627 ZNF784Q8NCA9 323 aaPredicted RBP10.87□□□□□ -0.67
PUM1-212ENST00000498627 KAT6BQ8WYB5 2073 aa10.86□□□□□ -0.67
PUM1-212ENST00000498627 THSD7AQ9UPZ6 1657 aa10.86□□□□□ -0.67
PUM1-212ENST00000498627 ZCRB1Q8TBF4 217 aaKnown RBP10.86□□□□□ -0.67
PUM1-212ENST00000498627 TMEM106CQ9BVX2 250 aa10.86□□□□□ -0.67
PUM1-212ENST00000498627 KCNQ2O43526 872 aa10.85□□□□□ -0.67
PUM1-212ENST00000498627 CDCA7Q9BWT1 371 aaPredicted RBP10.85□□□□□ -0.67
PUM1-212ENST00000498627 NUDCQ9Y266 331 aa10.85□□□□□ -0.67
PUM1-212ENST00000498627 NCAPD2Q15021 1401 aa10.84□□□□□ -0.67
PUM1-212ENST00000498627 FAM196AQ6ZSG2 479 aa10.84□□□□□ -0.67
PUM1-212ENST00000498627 PTF1AQ7RTS3 328 aa10.84□□□□□ -0.67
PUM1-212ENST00000498627 PHACTR3Q96KR7 559 aa10.84□□□□□ -0.67
PUM1-212ENST00000498627 CAMKK2Q96RR4 588 aa10.84□□□□□ -0.67
PUM1-212ENST00000498627 WNK3Q9BYP7 1800 aa10.84□□□□□ -0.67
PUM1-212ENST00000498627 TTLL13PA6NNM8 815 aa10.83□□□□□ -0.68
PUM1-212ENST00000498627 CYP27B1O15528 508 aa10.83□□□□□ -0.68
PUM1-212ENST00000498627 PRKAR2BP31323 418 aa10.83□□□□□ -0.68
PUM1-212ENST00000498627 ACSBG1Q96GR2 724 aa10.83□□□□□ -0.68
PUM1-212ENST00000498627 RSPH6AQ9H0K4 717 aa10.83□□□□□ -0.68
PUM1-212ENST00000498627 MRS2Q9HD23 443 aa10.83□□□□□ -0.68
PUM1-212ENST00000498627 BMP2KQ9NSY1 1161 aaPredicted RBP10.83□□□□□ -0.68
PUM1-212ENST00000498627 LRRC37A3O60309 1634 aa10.83□□□□□ -0.68
PUM1-212ENST00000498627 OVOS2A0A0G2JMS6 1433 aa10.83□□□□□ -0.68
PUM1-212ENST00000498627 KDRP35968 1356 aa10.82□□□□□ -0.68
PUM1-212ENST00000498627 PARP4Q9UKK3 1724 aaKnown RBP10.82□□□□□ -0.68
PUM1-212ENST00000498627 EZH2Q15910 746 aaKnown RBP10.82□□□□□ -0.68
PUM1-212ENST00000498627 MTHFSDQ2M296 383 aaKnown RBP10.82□□□□□ -0.68
PUM1-212ENST00000498627 PLEKHO1Q53GL0 409 aaPredicted RBP10.82□□□□□ -0.68
PUM1-212ENST00000498627 PAXIP1Q6ZW49 1069 aaPredicted RBP10.82□□□□□ -0.68
PUM1-212ENST00000498627 CCDC146Q8IYE0 955 aa10.82□□□□□ -0.68
PUM1-212ENST00000498627 SP7Q8TDD2 431 aaPredicted RBP10.82□□□□□ -0.68
PUM1-212ENST00000498627 ADAMTS8Q9UP79 889 aa10.82□□□□□ -0.68
PUM1-212ENST00000498627 TRIM37O94972 964 aa10.81□□□□□ -0.68
PUM1-212ENST00000498627 ZNF530Q6P9A1 599 aaPredicted RBP10.81□□□□□ -0.68
PUM1-212ENST00000498627 SPG7Q9UQ90 795 aa10.81□□□□□ -0.68
PUM1-212ENST00000498627 TNS2Q63HR2 1409 aa10.81□□□□□ -0.68
PUM1-212ENST00000498627 FCHSD2O94868 740 aa10.8□□□□□ -0.68
PUM1-212ENST00000498627 WDR43Q15061 677 aaKnown RBP eCLIP10.8□□□□□ -0.68
PUM1-212ENST00000498627 SHANK3Q9BYB0 1731 aa10.79□□□□□ -0.68
PUM1-212ENST00000498627 PHKG2P15735 406 aa10.79□□□□□ -0.68
PUM1-212ENST00000498627 MPRIPQ6WCQ1 1025 aa10.79□□□□□ -0.68
PUM1-212ENST00000498627 EFCAB3Q8N7B9 438 aa10.79□□□□□ -0.68
PUM1-212ENST00000498627 SPRYD3Q8NCJ5 442 aa10.79□□□□□ -0.68
PUM1-212ENST00000498627 PNISRQ8TF01 805 aaKnown RBP10.79□□□□□ -0.68
PUM1-212ENST00000498627 CFAP44Q96MT7 982 aa10.79□□□□□ -0.68
PUM1-212ENST00000498627 PLEKHF1Q96S99 279 aa10.79□□□□□ -0.68
PUM1-212ENST00000498627 PCDH11XQ9BZA7 1347 aa10.79□□□□□ -0.68
PUM1-212ENST00000498627 PCDH11YQ9BZA8 1340 aa10.79□□□□□ -0.68
PUM1-212ENST00000498627 APBA3O96018 575 aa10.78□□□□□ -0.68
PUM1-212ENST00000498627 PRIM1P49642 420 aaKnown RBP10.78□□□□□ -0.68
PUM1-212ENST00000498627 AMOTQ4VCS5 1084 aa10.78□□□□□ -0.68
PUM1-212ENST00000498627 IFNL2Q8IZJ0 200 aa10.78□□□□□ -0.68
PUM1-212ENST00000498627 FAM9BQ8IZU0 186 aa10.78□□□□□ -0.68
PUM1-212ENST00000498627 SYTL4Q96C24 671 aaPredicted RBP10.78□□□□□ -0.68
PUM1-212ENST00000498627 LGR6Q9HBX8 967 aa10.78□□□□□ -0.68
PUM1-212ENST00000498627 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.78□□□□□ -0.68
PUM1-212ENST00000498627 RRP7AQ9Y3A4 280 aaKnown RBP10.78□□□□□ -0.68
PUM1-212ENST00000498627 TNS1Q9HBL0 1735 aaKnown RBP10.78□□□□□ -0.68
PUM1-212ENST00000498627 GTPBP6O43824 516 aaPredicted RBP10.77□□□□□ -0.69
PUM1-212ENST00000498627 PKD1L3Q7Z443 1732 aa10.76□□□□□ -0.69
PUM1-212ENST00000498627 ATMINO43313 823 aaPredicted RBP10.76□□□□□ -0.69
PUM1-212ENST00000498627 GIGYF1O75420 1035 aaPredicted RBP10.76□□□□□ -0.69
PUM1-212ENST00000498627 DCTN1Q14203 1278 aa10.76□□□□□ -0.69
PUM1-212ENST00000498627 NEUROD2Q15784 382 aa10.76□□□□□ -0.69
PUM1-212ENST00000498627 C1orf141Q5JVX7 400 aa10.76□□□□□ -0.69
PUM1-212ENST00000498627 ASTLQ6HA08 431 aaPredicted RBP10.76□□□□□ -0.69
PUM1-212ENST00000498627 CHD4Q14839 1912 aa10.76□□□□□ -0.69
PUM1-212ENST00000498627 RREB1Q92766 1687 aa10.76□□□□□ -0.69
PUM1-212ENST00000498627 ATN1P54259 1190 aaPredicted RBP10.75□□□□□ -0.69
PUM1-212ENST00000498627 AKAP4Q5JQC9 854 aa10.75□□□□□ -0.69
PUM1-212ENST00000498627 MFRPQ9BY79 579 aa10.75□□□□□ -0.69
PUM1-212ENST00000498627 TRIM35Q9UPQ4 493 aa10.75□□□□□ -0.69
PUM1-212ENST00000498627 RNMTO43148 476 aaKnown RBP10.74□□□□□ -0.69
PUM1-212ENST00000498627 GOLGA2Q08379 1002 aa10.74□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms