RNA–Protein interactions for RNA: ENST00000497483.1

HDAC10-219, Transcript of histone deacetylase 10, human

TSL 2

Gene HDAC10, Length 578 nt, Biotype processed transcript, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HDAC10-219	ENST00000497483	COL5A3	P25940	1745 aa	Predicted RBP	33.62	■■■□□ 2.97
HDAC10-219	ENST00000497483	C1orf141	Q5JVX7	400 aa		33.6	■■■□□ 2.97
HDAC10-219	ENST00000497483	AK7	Q96M32	723 aa		33.6	■■■□□ 2.97
HDAC10-219	ENST00000497483	CIC	Q96RK0	1608 aa	Predicted RBP	33.58	■■■□□ 2.97
HDAC10-219	ENST00000497483	LINC00116	Q8NCU8	138 aa		33.57	■■■□□ 2.96
HDAC10-219	ENST00000497483	ADAMTS7	Q9UKP4	1686 aa		33.57	■■■□□ 2.96
HDAC10-219	ENST00000497483	MSH5	O43196	834 aa		33.56	■■■□□ 2.96
HDAC10-219	ENST00000497483	DIAPH1	O60610	1272 aa	Known RBP	33.56	■■■□□ 2.96
HDAC10-219	ENST00000497483	ITPK1	Q13572	414 aa		33.55	■■■□□ 2.96
HDAC10-219	ENST00000497483	ATP6V1A	P38606	617 aa		33.54	■■■□□ 2.96
HDAC10-219	ENST00000497483	MRC1	P22897	1456 aa		33.54	■■■□□ 2.96
HDAC10-219	ENST00000497483	SSFA2	P28290	1259 aa		33.53	■■■□□ 2.96
HDAC10-219	ENST00000497483	CABP4	P57796	275 aa		33.53	■■■□□ 2.96
HDAC10-219	ENST00000497483	AKAP4	Q5JQC9	854 aa		33.52	■■■□□ 2.96
HDAC10-219	ENST00000497483	AMIGO3	Q86WK7	504 aa		33.52	■■■□□ 2.96
HDAC10-219	ENST00000497483	HMOX1	P09601	288 aa		33.5	■■■□□ 2.95
HDAC10-219	ENST00000497483	RPL17-C18orf32	A0A0A6YYL6	228 aa	Known RBP	33.49	■■■□□ 2.95
HDAC10-219	ENST00000497483	CHD4	Q14839	1912 aa		33.49	■■■□□ 2.95
HDAC10-219	ENST00000497483	TJP1	Q07157	1748 aa		33.48	■■■□□ 2.95
HDAC10-219	ENST00000497483	SLC4A9	Q96Q91	983 aa		33.48	■■■□□ 2.95
HDAC10-219	ENST00000497483	MSL1	Q68DK7	614 aa		33.47	■■■□□ 2.95
HDAC10-219	ENST00000497483	PHF14	O94880	888 aa		33.46	■■■□□ 2.95
HDAC10-219	ENST00000497483	MYH14	Q7Z406	1995 aa	Known RBP	33.45	■■■□□ 2.95
HDAC10-219	ENST00000497483	GNPAT	O15228	680 aa		33.45	■■■□□ 2.95
HDAC10-219	ENST00000497483	YY1	P25490	414 aa		33.45	■■■□□ 2.95
HDAC10-219	ENST00000497483	NFATC2IP	Q8NCF5	419 aa		33.45	■■■□□ 2.95
HDAC10-219	ENST00000497483	RBM42	Q9BTD8	480 aa	Known RBP	33.44	■■■□□ 2.94
HDAC10-219	ENST00000497483	CNTNAP4	Q9C0A0	1308 aa		33.44	■■■□□ 2.94
HDAC10-219	ENST00000497483	CNGB1	Q14028	1251 aa	Predicted RBP	33.43	■■■□□ 2.94
HDAC10-219	ENST00000497483	KLHL34	Q8N239	644 aa		33.43	■■■□□ 2.94
HDAC10-219	ENST00000497483	C4A	P0C0L4	1744 aa		33.42	■■■□□ 2.94
HDAC10-219	ENST00000497483	MTHFSD	Q2M296	383 aa	Known RBP	33.41	■■■□□ 2.94
HDAC10-219	ENST00000497483	RC3H1	Q5TC82	1133 aa	Known RBP	33.41	■■■□□ 2.94
HDAC10-219	ENST00000497483	SMIM5	Q71RC9	77 aa		33.4	■■■□□ 2.94
HDAC10-219	ENST00000497483	SLC52A2	Q9HAB3	445 aa		33.4	■■■□□ 2.94
HDAC10-219	ENST00000497483	UBR2	Q8IWV8	1755 aa		33.39	■■■□□ 2.94
HDAC10-219	ENST00000497483	RNMT	O43148	476 aa	Known RBP	33.38	■■■□□ 2.93
HDAC10-219	ENST00000497483	NLGN2	Q8NFZ4	835 aa		33.38	■■■□□ 2.93
HDAC10-219	ENST00000497483	CFAP53	Q96M91	514 aa		33.38	■■■□□ 2.93
HDAC10-219	ENST00000497483	U2SURP	O15042	1029 aa	Known RBP	33.37	■■■□□ 2.93
HDAC10-219	ENST00000497483	LGR6	Q9HBX8	967 aa		33.37	■■■□□ 2.93
HDAC10-219	ENST00000497483	RTCB	Q9Y3I0	505 aa	Known RBP	33.37	■■■□□ 2.93
HDAC10-219	ENST00000497483	UTRN	P46939	3433 aa		33.37	■■■□□ 2.93
HDAC10-219	ENST00000497483	ADRA2B	P18089	450 aa		33.36	■■■□□ 2.93
HDAC10-219	ENST00000497483	SIPA1L3	O60292	1781 aa	Predicted RBP	33.36	■■■□□ 2.93
HDAC10-219	ENST00000497483	KCP	Q6ZWJ8	1503 aa		33.35	■■■□□ 2.93
HDAC10-219	ENST00000497483	PTCD1	O75127	700 aa	Known RBP	33.35	■■■□□ 2.93
HDAC10-219	ENST00000497483	CD2AP	Q9Y5K6	639 aa		33.35	■■■□□ 2.93
HDAC10-219	ENST00000497483	PPP2R1A	P30153	589 aa		33.34	■■■□□ 2.93
HDAC10-219	ENST00000497483	KIF13B	Q9NQT8	1826 aa		33.32	■■■□□ 2.93
HDAC10-219	ENST00000497483	RPS6KA4	O75676	772 aa		33.32	■■■□□ 2.92
HDAC10-219	ENST00000497483	GAS2L2	Q8NHY3	880 aa		33.32	■■■□□ 2.92
HDAC10-219	ENST00000497483	GPR162	Q16538	588 aa		33.31	■■■□□ 2.92
HDAC10-219	ENST00000497483	TRAPPC3L	Q5T215	181 aa		33.31	■■■□□ 2.92
HDAC10-219	ENST00000497483	CRKL	P46109	303 aa	Known RBP	33.28	■■■□□ 2.92
HDAC10-219	ENST00000497483	RSPH6A	Q9H0K4	717 aa		33.28	■■■□□ 2.92
HDAC10-219	ENST00000497483	NUDC	Q9Y266	331 aa		33.28	■■■□□ 2.92
HDAC10-219	ENST00000497483	GOLGB1	Q14789	3259 aa	Known RBP	33.27	■■■□□ 2.92
HDAC10-219	ENST00000497483	ARHGEF1	Q92888	912 aa	Known RBP	33.27	■■■□□ 2.92
HDAC10-219	ENST00000497483	GNAT3	A8MTJ3	354 aa		33.25	■■■□□ 2.91
HDAC10-219	ENST00000497483	KIAA1551	Q9HCM1	1747 aa		33.23	■■■□□ 2.91
HDAC10-219	ENST00000497483	PRKAR2B	P31323	418 aa		33.23	■■■□□ 2.91
HDAC10-219	ENST00000497483	SLC39A6	Q13433	755 aa		33.23	■■■□□ 2.91
HDAC10-219	ENST00000497483	NLGN1	Q8N2Q7	840 aa		33.23	■■■□□ 2.91
HDAC10-219	ENST00000497483	RFC4	P35249	363 aa		33.22	■■■□□ 2.91
HDAC10-219	ENST00000497483	CEMIP	Q8WUJ3	1361 aa		33.21	■■■□□ 2.91
HDAC10-219	ENST00000497483	MMP10	P09238	476 aa		33.21	■■■□□ 2.91
HDAC10-219	ENST00000497483	GYS1	P13807	737 aa		33.21	■■■□□ 2.91
HDAC10-219	ENST00000497483	PELP1	Q8IZL8	1130 aa	Known RBP	33.21	■■■□□ 2.91
HDAC10-219	ENST00000497483	VSIG10	Q8N0Z9	540 aa		33.21	■■■□□ 2.91
HDAC10-219	ENST00000497483	YBX3	P16989	372 aa	Known RBP eCLIP	33.2	■■■□□ 2.91
HDAC10-219	ENST00000497483	INTS5	Q6P9B9	1019 aa	Known RBP	33.2	■■■□□ 2.91
HDAC10-219	ENST00000497483	DNAJC10	Q8IXB1	793 aa		33.2	■■■□□ 2.91
HDAC10-219	ENST00000497483	IL17RE	Q8NFR9	667 aa		33.19	■■■□□ 2.9
HDAC10-219	ENST00000497483	PHACTR3	Q96KR7	559 aa		33.19	■■■□□ 2.9
HDAC10-219	ENST00000497483	U2AF1L5	P0DN76	240 aa	Predicted RBP	33.18	■■■□□ 2.9
HDAC10-219	ENST00000497483	U2AF1	Q01081	240 aa	Known RBP eCLIP	33.18	■■■□□ 2.9
HDAC10-219	ENST00000497483	CCDC87	Q9NVE4	849 aa		33.18	■■■□□ 2.9
HDAC10-219	ENST00000497483	GRIN3B	O60391	1043 aa		33.17	■■■□□ 2.9
HDAC10-219	ENST00000497483	FCHSD2	O94868	740 aa		33.17	■■■□□ 2.9
HDAC10-219	ENST00000497483	TEF	Q10587	303 aa		33.17	■■■□□ 2.9
HDAC10-219	ENST00000497483	USP42	Q9H9J4	1324 aa	Known RBP	33.17	■■■□□ 2.9
HDAC10-219	ENST00000497483	C10orf71	Q711Q0	1435 aa		33.17	■■■□□ 2.9
HDAC10-219	ENST00000497483	CYP19A1	P11511	503 aa	Predicted RBP	33.16	■■■□□ 2.9
HDAC10-219	ENST00000497483	SOS1	Q07889	1333 aa	Predicted RBP	33.15	■■■□□ 2.9
HDAC10-219	ENST00000497483	TTC5	Q8N0Z6	440 aa		33.15	■■■□□ 2.9
HDAC10-219	ENST00000497483	ZNF784	Q8NCA9	323 aa	Predicted RBP	33.13	■■■□□ 2.89
HDAC10-219	ENST00000497483	PXDNL	A1KZ92	1463 aa		33.12	■■■□□ 2.89
HDAC10-219	ENST00000497483	N4BP2	Q86UW6	1770 aa	Predicted RBP	33.12	■■■□□ 2.89
HDAC10-219	ENST00000497483	BRCA1	P38398	1863 aa	Known RBP	33.12	■■■□□ 2.89
HDAC10-219	ENST00000497483	ZNF790	Q6PG37	636 aa		33.11	■■■□□ 2.89
HDAC10-219	ENST00000497483	COL15A1	P39059	1388 aa		33.1	■■■□□ 2.89
HDAC10-219	ENST00000497483	DLG5	Q8TDM6	1919 aa		33.1	■■■□□ 2.89
HDAC10-219	ENST00000497483	HEG1	Q9ULI3	1381 aa		33.1	■■■□□ 2.89
HDAC10-219	ENST00000497483	SRP68	Q9UHB9	627 aa	Known RBP	33.1	■■■□□ 2.89
HDAC10-219	ENST00000497483	ZBTB1	Q9Y2K1	713 aa		33.08	■■■□□ 2.89
HDAC10-219	ENST00000497483	ZNF496	Q96IT1	587 aa	Predicted RBP	33.07	■■■□□ 2.88
HDAC10-219	ENST00000497483	PARP3	Q9Y6F1	533 aa		33.07	■■■□□ 2.88
HDAC10-219	ENST00000497483	SCN7A	Q01118	1682 aa		33.05	■■■□□ 2.88
HDAC10-219	ENST00000497483	TGFB2	P61812	414 aa		33.05	■■■□□ 2.88

Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms