RNA–Protein interactions for RNA: ENST00000497183.5

PRKCZ-223, Transcript of protein kinase C zeta, human

TSL 3

Gene PRKCZ, Length 763 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PRKCZ-223	ENST00000497183	NKX1-1	Q15270	411 aa	Predicted RBP	10.39	□□□□□ -0.75
PRKCZ-223	ENST00000497183	PIGB	Q92521	554 aa		10.39	□□□□□ -0.75
PRKCZ-223	ENST00000497183	GGNBP2	Q9H3C7	697 aa		10.39	□□□□□ -0.75
PRKCZ-223	ENST00000497183	SMG6	Q86US8	1419 aa	Known RBP	10.39	□□□□□ -0.75
PRKCZ-223	ENST00000497183	TNRC6C	Q9HCJ0	1690 aa	Known RBP	10.38	□□□□□ -0.75
PRKCZ-223	ENST00000497183	AFDN	P55196	1824 aa	Known RBP	10.38	□□□□□ -0.75
PRKCZ-223	ENST00000497183	RPL17-C18orf32	A0A0A6YYL6	228 aa	Known RBP	10.38	□□□□□ -0.75
PRKCZ-223	ENST00000497183	MPRIP	Q6WCQ1	1025 aa		10.38	□□□□□ -0.75
PRKCZ-223	ENST00000497183	FLAD1	Q8NFF5	587 aa		10.38	□□□□□ -0.75
PRKCZ-223	ENST00000497183	CCDC88A	Q3V6T2	1871 aa		10.38	□□□□□ -0.75
PRKCZ-223	ENST00000497183	TAT	P17735	454 aa	Predicted RBP	10.37	□□□□□ -0.75
PRKCZ-223	ENST00000497183	RAPGEF4	Q8WZA2	1011 aa		10.37	□□□□□ -0.75
PRKCZ-223	ENST00000497183	TONSL	Q96HA7	1378 aa		10.37	□□□□□ -0.75
PRKCZ-223	ENST00000497183	SCN11A	Q9UI33	1791 aa		10.37	□□□□□ -0.75
PRKCZ-223	ENST00000497183	SSFA2	P28290	1259 aa		10.36	□□□□□ -0.75
PRKCZ-223	ENST00000497183	SLC4A9	Q96Q91	983 aa		10.36	□□□□□ -0.75
PRKCZ-223	ENST00000497183	CARD14	Q9BXL6	1004 aa		10.36	□□□□□ -0.75
PRKCZ-223	ENST00000497183	EMILIN1	Q9Y6C2	1016 aa		10.36	□□□□□ -0.75
PRKCZ-223	ENST00000497183	NRXN2	Q9P2S2	1712 aa		10.36	□□□□□ -0.75
PRKCZ-223	ENST00000497183	LOC102724428	A0A0B4J2F2	783 aa		10.35	□□□□□ -0.75
PRKCZ-223	ENST00000497183	PHF14	O94880	888 aa		10.35	□□□□□ -0.75
PRKCZ-223	ENST00000497183	HSPA1A	P0DMV8	641 aa	Known RBP	10.35	□□□□□ -0.75
PRKCZ-223	ENST00000497183	HSPA1B	P0DMV9	641 aa	Known RBP	10.35	□□□□□ -0.75
PRKCZ-223	ENST00000497183	SIK1	P57059	783 aa		10.35	□□□□□ -0.75
PRKCZ-223	ENST00000497183	AK7	Q96M32	723 aa		10.35	□□□□□ -0.75
PRKCZ-223	ENST00000497183	ASAP1	Q9ULH1	1129 aa		10.35	□□□□□ -0.75
PRKCZ-223	ENST00000497183	TIAM2	Q8IVF5	1701 aa		10.35	□□□□□ -0.75
PRKCZ-223	ENST00000497183	SMARCC1	Q92922	1105 aa	Predicted RBP	10.34	□□□□□ -0.75
PRKCZ-223	ENST00000497183	KDM6A	O15550	1401 aa	Predicted RBP	10.33	□□□□□ -0.76
PRKCZ-223	ENST00000497183	TOMM70	O94826	608 aa		10.33	□□□□□ -0.76
PRKCZ-223	ENST00000497183	PLEKHG2	Q9H7P9	1386 aa		10.32	□□□□□ -0.76
PRKCZ-223	ENST00000497183	MMP10	P09238	476 aa		10.32	□□□□□ -0.76
PRKCZ-223	ENST00000497183	KCNA3	P22001	575 aa		10.32	□□□□□ -0.76
PRKCZ-223	ENST00000497183	ATG3	Q9NT62	314 aa		10.32	□□□□□ -0.76
PRKCZ-223	ENST00000497183	DICER1	Q9UPY3	1922 aa	Known RBP	10.31	□□□□□ -0.76
PRKCZ-223	ENST00000497183	GNPAT	O15228	680 aa		10.31	□□□□□ -0.76
PRKCZ-223	ENST00000497183	PHKG2	P15735	406 aa		10.31	□□□□□ -0.76
PRKCZ-223	ENST00000497183	EYA1	Q99502	592 aa		10.31	□□□□□ -0.76
PRKCZ-223	ENST00000497183	NMRK2	Q9NPI5	230 aa		10.31	□□□□□ -0.76
PRKCZ-223	ENST00000497183	BCLAF1	Q9NYF8	920 aa	Known RBP eCLIP	10.31	□□□□□ -0.76
PRKCZ-223	ENST00000497183	ANKRD31	Q8N7Z5	1873 aa		10.31	□□□□□ -0.76
PRKCZ-223	ENST00000497183	UBR2	Q8IWV8	1755 aa		10.31	□□□□□ -0.76
PRKCZ-223	ENST00000497183	WASHC2A	Q641Q2	1341 aa		10.31	□□□□□ -0.76
PRKCZ-223	ENST00000497183	KCP	Q6ZWJ8	1503 aa		10.3	□□□□□ -0.76
PRKCZ-223	ENST00000497183		A0A0G2JLW4	131 aa		10.3	□□□□□ -0.76
PRKCZ-223	ENST00000497183	GYS1	P13807	737 aa		10.29	□□□□□ -0.76
PRKCZ-223	ENST00000497183	ATP6V1A	P38606	617 aa		10.29	□□□□□ -0.76
PRKCZ-223	ENST00000497183	TGFB2	P61812	414 aa		10.29	□□□□□ -0.76
PRKCZ-223	ENST00000497183	TMOD3	Q9NYL9	352 aa		10.29	□□□□□ -0.76
PRKCZ-223	ENST00000497183	COL11A2	P13942	1736 aa	Predicted RBP	10.29	□□□□□ -0.76
PRKCZ-223	ENST00000497183	FER1L6	Q2WGJ9	1857 aa		10.28	□□□□□ -0.76
PRKCZ-223	ENST00000497183	DPEP1	P16444	411 aa		10.28	□□□□□ -0.76
PRKCZ-223	ENST00000497183	HMGB2	P26583	209 aa	Known RBP	10.28	□□□□□ -0.76
PRKCZ-223	ENST00000497183	POLK	Q9UBT6	870 aa		10.28	□□□□□ -0.76
PRKCZ-223	ENST00000497183	SPG7	Q9UQ90	795 aa		10.28	□□□□□ -0.76
PRKCZ-223	ENST00000497183	CNTNAP4	Q9C0A0	1308 aa		10.28	□□□□□ -0.76
PRKCZ-223	ENST00000497183	CACNA1S	Q13698	1873 aa		10.27	□□□□□ -0.76
PRKCZ-223	ENST00000497183	TMF1	P82094	1093 aa		10.27	□□□□□ -0.77
PRKCZ-223	ENST00000497183	ARHGEF1	Q92888	912 aa	Known RBP	10.27	□□□□□ -0.77
PRKCZ-223	ENST00000497183	BCS1L	Q9Y276	419 aa		10.27	□□□□□ -0.77
PRKCZ-223	ENST00000497183	SIPA1L3	O60292	1781 aa	Predicted RBP	10.26	□□□□□ -0.77
PRKCZ-223	ENST00000497183	MRC1	P22897	1456 aa		10.26	□□□□□ -0.77
PRKCZ-223	ENST00000497183	SLC24A1	O60721	1099 aa		10.26	□□□□□ -0.77
PRKCZ-223	ENST00000497183	DDR1	Q08345	913 aa		10.26	□□□□□ -0.77
PRKCZ-223	ENST00000497183	EIF4A2	Q14240	407 aa	Known RBP	10.26	□□□□□ -0.77
PRKCZ-223	ENST00000497183	RC3H1	Q5TC82	1133 aa	Known RBP	10.26	□□□□□ -0.77
PRKCZ-223	ENST00000497183	IFNL2	Q8IZJ0	200 aa		10.26	□□□□□ -0.77
PRKCZ-223	ENST00000497183	DCAF5	Q96JK2	942 aa		10.26	□□□□□ -0.77
PRKCZ-223	ENST00000497183	ARFGEF2	Q9Y6D5	1785 aa		10.26	□□□□□ -0.77
PRKCZ-223	ENST00000497183	SCN7A	Q01118	1682 aa		10.25	□□□□□ -0.77
PRKCZ-223	ENST00000497183	ADRA2B	P18089	450 aa		10.25	□□□□□ -0.77
PRKCZ-223	ENST00000497183	NLGN1	Q8N2Q7	840 aa		10.25	□□□□□ -0.77
PRKCZ-223	ENST00000497183	RBM46	Q8TBY0	533 aa	Known RBP	10.25	□□□□□ -0.77
PRKCZ-223	ENST00000497183	ERVV-2	B6SEH9	535 aa		10.24	□□□□□ -0.77
PRKCZ-223	ENST00000497183	RPS6KA4	O75676	772 aa		10.24	□□□□□ -0.77
PRKCZ-223	ENST00000497183	TRAPPC3L	Q5T215	181 aa		10.24	□□□□□ -0.77
PRKCZ-223	ENST00000497183	C9orf131	Q5VYM1	1079 aa		10.24	□□□□□ -0.77
PRKCZ-223	ENST00000497183	RTCB	Q9Y3I0	505 aa	Known RBP	10.24	□□□□□ -0.77
PRKCZ-223	ENST00000497183	FCHSD2	O94868	740 aa		10.23	□□□□□ -0.77
PRKCZ-223	ENST00000497183	MLLT1	Q03111	559 aa	Predicted RBP	10.23	□□□□□ -0.77
PRKCZ-223	ENST00000497183	FKBP8	Q14318	412 aa		10.23	□□□□□ -0.77
PRKCZ-223	ENST00000497183	ARHGAP27	Q6ZUM4	889 aa		10.23	□□□□□ -0.77
PRKCZ-223	ENST00000497183	SRP68	Q9UHB9	627 aa	Known RBP	10.23	□□□□□ -0.77
PRKCZ-223	ENST00000497183	USP42	Q9H9J4	1324 aa	Known RBP	10.23	□□□□□ -0.77
PRKCZ-223	ENST00000497183	BCOR	Q6W2J9	1755 aa		10.22	□□□□□ -0.77
PRKCZ-223	ENST00000497183	PPM1G	O15355	546 aa	Predicted RBP	10.22	□□□□□ -0.77
PRKCZ-223	ENST00000497183	CCDC87	Q9NVE4	849 aa		10.22	□□□□□ -0.77
PRKCZ-223	ENST00000497183	POLRMT	O00411	1230 aa	Known RBP	10.21	□□□□□ -0.77
PRKCZ-223	ENST00000497183	TM4SF1	P30408	202 aa		10.21	□□□□□ -0.77
PRKCZ-223	ENST00000497183	CHRNA5	P30532	468 aa		10.21	□□□□□ -0.77
PRKCZ-223	ENST00000497183	CRKL	P46109	303 aa	Known RBP	10.21	□□□□□ -0.77
PRKCZ-223	ENST00000497183	FSTL1	Q12841	308 aa		10.21	□□□□□ -0.77
PRKCZ-223	ENST00000497183	INTS5	Q6P9B9	1019 aa	Known RBP	10.21	□□□□□ -0.77
PRKCZ-223	ENST00000497183	AEBP1	Q8IUX7	1158 aa		10.21	□□□□□ -0.77
PRKCZ-223	ENST00000497183	CARMIL3	Q8ND23	1372 aa		10.2	□□□□□ -0.78
PRKCZ-223	ENST00000497183	RBM42	Q9BTD8	480 aa	Known RBP	10.2	□□□□□ -0.78
PRKCZ-223	ENST00000497183	PIM2	Q9P1W9	311 aa		10.2	□□□□□ -0.78
PRKCZ-223	ENST00000497183	PARP3	Q9Y6F1	533 aa		10.2	□□□□□ -0.78
PRKCZ-223	ENST00000497183	SLX4	Q8IY92	1834 aa		10.19	□□□□□ -0.78
PRKCZ-223	ENST00000497183	RFC4	P35249	363 aa		10.19	□□□□□ -0.78

Retrieved 100 of 20,778 RNA–protein pairs in 99.9 ms