RNA–Protein interactions for RNA: ENST00000496925.5

PSMD2-220, Transcript of proteasome 26S subunit, non-ATPase 2, human

TSL 2

Gene PSMD2, Length 723 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PSMD2-220	ENST00000496925	LY75	O60449	1722 aa		13.98	□□□□□ -0.17
PSMD2-220	ENST00000496925	TUBGCP6	Q96RT7	1819 aa		13.97	□□□□□ -0.17
PSMD2-220	ENST00000496925	RTCB	Q9Y3I0	505 aa	Known RBP	13.97	□□□□□ -0.17
PSMD2-220	ENST00000496925	KNSTRN	Q9Y448	316 aa		13.97	□□□□□ -0.17
PSMD2-220	ENST00000496925		A0A0G2JLW4	131 aa		13.96	□□□□□ -0.17
PSMD2-220	ENST00000496925	ERVV-2	B6SEH9	535 aa		13.96	□□□□□ -0.17
PSMD2-220	ENST00000496925	C1orf141	Q5JVX7	400 aa		13.96	□□□□□ -0.17
PSMD2-220	ENST00000496925	NFATC2IP	Q8NCF5	419 aa		13.96	□□□□□ -0.17
PSMD2-220	ENST00000496925	ARHGEF1	Q92888	912 aa	Known RBP	13.96	□□□□□ -0.17
PSMD2-220	ENST00000496925	DCAF5	Q96JK2	942 aa		13.96	□□□□□ -0.17
PSMD2-220	ENST00000496925	RFC4	P35249	363 aa		13.95	□□□□□ -0.18
PSMD2-220	ENST00000496925	GPBP1L1	Q9HC44	474 aa	Predicted RBP	13.95	□□□□□ -0.18
PSMD2-220	ENST00000496925	HSP90AB1	P08238	724 aa	Known RBP	13.94	□□□□□ -0.18
PSMD2-220	ENST00000496925	ATP10D	Q9P241	1426 aa		13.94	□□□□□ -0.18
PSMD2-220	ENST00000496925	CLSPN	Q9HAW4	1339 aa		13.93	□□□□□ -0.18
PSMD2-220	ENST00000496925	C4B	P0C0L5	1744 aa		13.93	□□□□□ -0.18
PSMD2-220	ENST00000496925	TOGARAM1	Q9Y4F4	1720 aa		13.93	□□□□□ -0.18
PSMD2-220	ENST00000496925	NCAPD2	Q15021	1401 aa		13.93	□□□□□ -0.18
PSMD2-220	ENST00000496925	HMOX1	P09601	288 aa		13.93	□□□□□ -0.18
PSMD2-220	ENST00000496925	AMOT	Q4VCS5	1084 aa		13.93	□□□□□ -0.18
PSMD2-220	ENST00000496925	ARHGAP27	Q6ZUM4	889 aa		13.93	□□□□□ -0.18
PSMD2-220	ENST00000496925	SRP68	Q9UHB9	627 aa	Known RBP	13.93	□□□□□ -0.18
PSMD2-220	ENST00000496925	BCS1L	Q9Y276	419 aa		13.93	□□□□□ -0.18
PSMD2-220	ENST00000496925	C5	P01031	1676 aa		13.92	□□□□□ -0.18
PSMD2-220	ENST00000496925	RPS6KA4	O75676	772 aa		13.92	□□□□□ -0.18
PSMD2-220	ENST00000496925	IL13	P35225	146 aa		13.92	□□□□□ -0.18
PSMD2-220	ENST00000496925	CC2D1B	Q5T0F9	858 aa	Known RBP	13.92	□□□□□ -0.18
PSMD2-220	ENST00000496925	LGR6	Q9HBX8	967 aa		13.92	□□□□□ -0.18
PSMD2-220	ENST00000496925	QSER1	Q2KHR3	1735 aa		13.92	□□□□□ -0.18
PSMD2-220	ENST00000496925	DPEP1	P16444	411 aa		13.91	□□□□□ -0.18
PSMD2-220	ENST00000496925	NLGN1	Q8N2Q7	840 aa		13.91	□□□□□ -0.18
PSMD2-220	ENST00000496925	PARP3	Q9Y6F1	533 aa		13.91	□□□□□ -0.18
PSMD2-220	ENST00000496925	MAP2	P11137	1827 aa	Known RBP	13.9	□□□□□ -0.18
PSMD2-220	ENST00000496925	UTRN	P46939	3433 aa		13.9	□□□□□ -0.18
PSMD2-220	ENST00000496925	GYS1	P13807	737 aa		13.9	□□□□□ -0.18
PSMD2-220	ENST00000496925	CRKL	P46109	303 aa	Known RBP	13.9	□□□□□ -0.18
PSMD2-220	ENST00000496925	SLC39A6	Q13433	755 aa		13.9	□□□□□ -0.18
PSMD2-220	ENST00000496925	ITGB4	P16144	1822 aa		13.9	□□□□□ -0.18
PSMD2-220	ENST00000496925	FCHSD2	O94868	740 aa		13.89	□□□□□ -0.19
PSMD2-220	ENST00000496925	RC3H1	Q5TC82	1133 aa	Known RBP	13.89	□□□□□ -0.19
PSMD2-220	ENST00000496925	CCDC87	Q9NVE4	849 aa		13.89	□□□□□ -0.19
PSMD2-220	ENST00000496925	KDM6A	O15550	1401 aa	Predicted RBP	13.89	□□□□□ -0.19
PSMD2-220	ENST00000496925	CHD4	Q14839	1912 aa		13.88	□□□□□ -0.19
PSMD2-220	ENST00000496925	PKD1L3	Q7Z443	1732 aa		13.88	□□□□□ -0.19
PSMD2-220	ENST00000496925	FKBP8	Q14318	412 aa		13.88	□□□□□ -0.19
PSMD2-220	ENST00000496925	DNAJC10	Q8IXB1	793 aa		13.88	□□□□□ -0.19
PSMD2-220	ENST00000496925	COL24A1	Q17RW2	1714 aa		13.87	□□□□□ -0.19
PSMD2-220	ENST00000496925	AMER1	Q5JTC6	1135 aa	Predicted RBP	13.87	□□□□□ -0.19
PSMD2-220	ENST00000496925	KIF7	Q2M1P5	1343 aa		13.87	□□□□□ -0.19
PSMD2-220	ENST00000496925	CNTNAP4	Q9C0A0	1308 aa		13.87	□□□□□ -0.19
PSMD2-220	ENST00000496925	KDR	P35968	1356 aa		13.86	□□□□□ -0.19
PSMD2-220	ENST00000496925	TGFB2	P61812	414 aa		13.86	□□□□□ -0.19
PSMD2-220	ENST00000496925	AKAP4	Q5JQC9	854 aa		13.86	□□□□□ -0.19
PSMD2-220	ENST00000496925	INTS5	Q6P9B9	1019 aa	Known RBP	13.86	□□□□□ -0.19
PSMD2-220	ENST00000496925	TAF1L	Q8IZX4	1826 aa		13.85	□□□□□ -0.19
PSMD2-220	ENST00000496925	U2SURP	O15042	1029 aa	Known RBP	13.85	□□□□□ -0.19
PSMD2-220	ENST00000496925	RNMT	O43148	476 aa	Known RBP	13.85	□□□□□ -0.19
PSMD2-220	ENST00000496925	ADRA2B	P18089	450 aa		13.85	□□□□□ -0.19
PSMD2-220	ENST00000496925	CHRNA5	P30532	468 aa		13.85	□□□□□ -0.19
PSMD2-220	ENST00000496925	MTHFSD	Q2M296	383 aa	Known RBP	13.85	□□□□□ -0.19
PSMD2-220	ENST00000496925	USPL1	Q5W0Q7	1092 aa		13.85	□□□□□ -0.19
PSMD2-220	ENST00000496925	ZPR1	O75312	459 aa		13.84	□□□□□ -0.19
PSMD2-220	ENST00000496925	CANX	P27824	592 aa	Known RBP	13.84	□□□□□ -0.19
PSMD2-220	ENST00000496925	DDR1	Q08345	913 aa		13.84	□□□□□ -0.19
PSMD2-220	ENST00000496925	SLC52A2	Q9HAB3	445 aa		13.84	□□□□□ -0.19
PSMD2-220	ENST00000496925	DIAPH1	O60610	1272 aa	Known RBP	13.83	□□□□□ -0.2
PSMD2-220	ENST00000496925	UBR3	Q6ZT12	1888 aa		13.82	□□□□□ -0.2
PSMD2-220	ENST00000496925	PXDNL	A1KZ92	1463 aa		13.82	□□□□□ -0.2
PSMD2-220	ENST00000496925	KIF3C	O14782	793 aa		13.82	□□□□□ -0.2
PSMD2-220	ENST00000496925	KCNA3	P22001	575 aa		13.82	□□□□□ -0.2
PSMD2-220	ENST00000496925	C9orf131	Q5VYM1	1079 aa		13.82	□□□□□ -0.2
PSMD2-220	ENST00000496925	BICDL1	Q6ZP65	573 aa		13.82	□□□□□ -0.2
PSMD2-220	ENST00000496925	PIM2	Q9P1W9	311 aa		13.82	□□□□□ -0.2
PSMD2-220	ENST00000496925	ZNF330	Q9Y3S2	320 aa	Predicted RBP	13.82	□□□□□ -0.2
PSMD2-220	ENST00000496925	CIC	Q96RK0	1608 aa	Predicted RBP	13.82	□□□□□ -0.2
PSMD2-220	ENST00000496925	CYP19A1	P11511	503 aa	Predicted RBP	13.81	□□□□□ -0.2
PSMD2-220	ENST00000496925	DALRD3	Q5D0E6	543 aa	Known RBP	13.81	□□□□□ -0.2
PSMD2-220	ENST00000496925	NMRK2	Q9NPI5	230 aa		13.81	□□□□□ -0.2
PSMD2-220	ENST00000496925	USP42	Q9H9J4	1324 aa	Known RBP	13.81	□□□□□ -0.2
PSMD2-220	ENST00000496925	ANKRD26	Q9UPS8	1709 aa		13.81	□□□□□ -0.2
PSMD2-220	ENST00000496925	PER1	O15534	1290 aa	Predicted RBP	13.8	□□□□□ -0.2
PSMD2-220	ENST00000496925	HSPA6	P17066	643 aa		13.8	□□□□□ -0.2
PSMD2-220	ENST00000496925	CCDC24	Q8N4L8	307 aa		13.8	□□□□□ -0.2
PSMD2-220	ENST00000496925	ZBTB1	Q9Y2K1	713 aa		13.8	□□□□□ -0.2
PSMD2-220	ENST00000496925	ADCY9	O60503	1353 aa		13.8	□□□□□ -0.2
PSMD2-220	ENST00000496925	POLRMT	O00411	1230 aa	Known RBP	13.79	□□□□□ -0.2
PSMD2-220	ENST00000496925	TM4SF1	P30408	202 aa		13.79	□□□□□ -0.2
PSMD2-220	ENST00000496925	NFIX	Q14938	502 aa		13.78	□□□□□ -0.2
PSMD2-220	ENST00000496925	RNF181	Q9P0P0	153 aa		13.78	□□□□□ -0.2
PSMD2-220	ENST00000496925	ZNF219	Q9P2Y4	722 aa	Predicted RBP	13.78	□□□□□ -0.2
PSMD2-220	ENST00000496925	C10orf71	Q711Q0	1435 aa		13.78	□□□□□ -0.2
PSMD2-220	ENST00000496925	SERPINB2	P05120	415 aa		13.77	□□□□□ -0.21
PSMD2-220	ENST00000496925	SOS1	Q07889	1333 aa	Predicted RBP	13.77	□□□□□ -0.21
PSMD2-220	ENST00000496925	TTC5	Q8N0Z6	440 aa		13.77	□□□□□ -0.21
PSMD2-220	ENST00000496925	RASSF7	Q02833	373 aa		13.76	□□□□□ -0.21
PSMD2-220	ENST00000496925	TEF	Q10587	303 aa		13.76	□□□□□ -0.21
PSMD2-220	ENST00000496925	IL17RE	Q8NFR9	667 aa		13.76	□□□□□ -0.21
PSMD2-220	ENST00000496925	BCL2L12	Q9HB09	334 aa		13.76	□□□□□ -0.21
PSMD2-220	ENST00000496925	RRAGC	Q9HB90	399 aa		13.76	□□□□□ -0.21
PSMD2-220	ENST00000496925	NARF	Q9UHQ1	456 aa		13.76	□□□□□ -0.21

Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms