RNA–Protein interactions for RNA: ENST00000496569.1

HDLBP-246, Transcript of high density lipoprotein binding protein, humanhuman

TSL 4

Gene HDLBP, Length 374 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-246ENST00000496569 SMARCC1Q92922 1105 aaPredicted RBP16.5■□□□□ 0.23
HDLBP-246ENST00000496569 ADAMTS7Q9UKP4 1686 aa16.5■□□□□ 0.23
HDLBP-246ENST00000496569 PPP2R1AP30153 589 aa16.49■□□□□ 0.23
HDLBP-246ENST00000496569 DCAF5Q96JK2 942 aa16.49■□□□□ 0.23
HDLBP-246ENST00000496569 SLC4A9Q96Q91 983 aa16.49■□□□□ 0.23
HDLBP-246ENST00000496569 PHF14O94880 888 aa16.48■□□□□ 0.23
HDLBP-246ENST00000496569 CABP4P57796 275 aa16.48■□□□□ 0.23
HDLBP-246ENST00000496569 MTHFSDQ2M296 383 aaKnown RBP16.48■□□□□ 0.23
HDLBP-246ENST00000496569 ZNF831Q5JPB2 1677 aa16.47■□□□□ 0.23
HDLBP-246ENST00000496569 ERVV-2B6SEH9 535 aa16.47■□□□□ 0.23
HDLBP-246ENST00000496569 HSP90AB1P08238 724 aaKnown RBP16.47■□□□□ 0.23
HDLBP-246ENST00000496569 RBM42Q9BTD8 480 aaKnown RBP16.47■□□□□ 0.23
HDLBP-246ENST00000496569 FHDC1Q9C0D6 1143 aaPredicted RBP16.47■□□□□ 0.23
HDLBP-246ENST00000496569 LGR6Q9HBX8 967 aa16.47■□□□□ 0.23
HDLBP-246ENST00000496569 SIPA1L3O60292 1781 aaPredicted RBP16.46■□□□□ 0.23
HDLBP-246ENST00000496569 C4AP0C0L4 1744 aa16.46■□□□□ 0.23
HDLBP-246ENST00000496569 ATP6V1AP38606 617 aa16.46■□□□□ 0.23
HDLBP-246ENST00000496569 KLHL34Q8N239 644 aa16.46■□□□□ 0.23
HDLBP-246ENST00000496569 AK7Q96M32 723 aa16.46■□□□□ 0.23
HDLBP-246ENST00000496569 MRC1P22897 1456 aa16.46■□□□□ 0.23
HDLBP-246ENST00000496569 AKAP4Q5JQC9 854 aa16.45■□□□□ 0.22
HDLBP-246ENST00000496569 NFATC2IPQ8NCF5 419 aa16.45■□□□□ 0.22
HDLBP-246ENST00000496569 ARXQ96QS3 562 aa16.45■□□□□ 0.22
HDLBP-246ENST00000496569 PTCD1O75127 700 aaKnown RBP16.44■□□□□ 0.22
HDLBP-246ENST00000496569 DLG5Q8TDM6 1919 aa16.44■□□□□ 0.22
HDLBP-246ENST00000496569 GNPATO15228 680 aa16.43■□□□□ 0.22
HDLBP-246ENST00000496569 RNMTO43148 476 aaKnown RBP16.43■□□□□ 0.22
HDLBP-246ENST00000496569 SLC16A10Q8TF71 515 aa16.43■□□□□ 0.22
HDLBP-246ENST00000496569 SYT17Q9BSW7 474 aa16.43■□□□□ 0.22
HDLBP-246ENST00000496569 UBR2Q8IWV8 1755 aa16.43■□□□□ 0.22
HDLBP-246ENST00000496569 CICQ96RK0 1608 aaPredicted RBP16.42■□□□□ 0.22
HDLBP-246ENST00000496569 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.42■□□□□ 0.22
HDLBP-246ENST00000496569 PRKAR2BP31323 418 aa16.42■□□□□ 0.22
HDLBP-246ENST00000496569 SLC39A6Q13433 755 aa16.42■□□□□ 0.22
HDLBP-246ENST00000496569 CFAP53Q96M91 514 aa16.42■□□□□ 0.22
HDLBP-246ENST00000496569 KCPQ6ZWJ8 1503 aa16.41■□□□□ 0.22
HDLBP-246ENST00000496569 DDX10Q13206 875 aaKnown RBP16.41■□□□□ 0.22
HDLBP-246ENST00000496569 PHACTR3Q96KR7 559 aa16.41■□□□□ 0.22
HDLBP-246ENST00000496569 RSPH6AQ9H0K4 717 aa16.41■□□□□ 0.22
HDLBP-246ENST00000496569 SLC52A2Q9HAB3 445 aa16.41■□□□□ 0.22
HDLBP-246ENST00000496569 POLD1P28340 1107 aa16.4■□□□□ 0.22
HDLBP-246ENST00000496569 UTRNP46939 3433 aa16.4■□□□□ 0.22
HDLBP-246ENST00000496569 MAP3K5Q99683 1374 aa16.39■□□□□ 0.21
HDLBP-246ENST00000496569 U2AF1L5P0DN76 240 aaPredicted RBP16.39■□□□□ 0.21
HDLBP-246ENST00000496569 U2AF1Q01081 240 aaKnown RBP eCLIP16.39■□□□□ 0.21
HDLBP-246ENST00000496569 NLGN2Q8NFZ4 835 aa16.39■□□□□ 0.21
HDLBP-246ENST00000496569 GOLGB1Q14789 3259 aaKnown RBP16.38■□□□□ 0.21
HDLBP-246ENST00000496569 SSFA2P28290 1259 aa16.37■□□□□ 0.21
HDLBP-246ENST00000496569 CHD4Q14839 1912 aa16.37■□□□□ 0.21
HDLBP-246ENST00000496569 DNAJC10Q8IXB1 793 aa16.36■□□□□ 0.21
HDLBP-246ENST00000496569 FLAD1Q8NFF5 587 aa16.36■□□□□ 0.21
HDLBP-246ENST00000496569 IL17REQ8NFR9 667 aa16.36■□□□□ 0.21
HDLBP-246ENST00000496569 CRKLP46109 303 aaKnown RBP16.35■□□□□ 0.21
HDLBP-246ENST00000496569 GAS2L2Q8NHY3 880 aa16.35■□□□□ 0.21
HDLBP-246ENST00000496569 NUDCQ9Y266 331 aa16.35■□□□□ 0.21
HDLBP-246ENST00000496569 CNTNAP4Q9C0A0 1308 aa16.35■□□□□ 0.21
HDLBP-246ENST00000496569 GNAT3A8MTJ3 354 aa16.34■□□□□ 0.21
HDLBP-246ENST00000496569 RTCBQ9Y3I0 505 aaKnown RBP16.34■□□□□ 0.21
HDLBP-246ENST00000496569 N4BP2Q86UW6 1770 aaPredicted RBP16.33■□□□□ 0.21
HDLBP-246ENST00000496569 DCTN1Q14203 1278 aa16.33■□□□□ 0.2
HDLBP-246ENST00000496569 PELP1Q8IZL8 1130 aaKnown RBP16.33■□□□□ 0.2
HDLBP-246ENST00000496569 KIAA1551Q9HCM1 1747 aa16.33■□□□□ 0.2
HDLBP-246ENST00000496569 RPS6KA4O75676 772 aa16.32■□□□□ 0.2
HDLBP-246ENST00000496569 ARHGEF1Q92888 912 aaKnown RBP16.32■□□□□ 0.2
HDLBP-246ENST00000496569 SRP68Q9UHB9 627 aaKnown RBP16.32■□□□□ 0.2
HDLBP-246ENST00000496569 WWC3Q9ULE0 1092 aa16.32■□□□□ 0.2
HDLBP-246ENST00000496569 KCNQ3O43525 872 aa16.31■□□□□ 0.2
HDLBP-246ENST00000496569 TEFQ10587 303 aa16.31■□□□□ 0.2
HDLBP-246ENST00000496569 RC3H1Q5TC82 1133 aaKnown RBP16.31■□□□□ 0.2
HDLBP-246ENST00000496569 MCM10Q7L590 875 aa16.31■□□□□ 0.2
HDLBP-246ENST00000496569 KIF13BQ9NQT8 1826 aa16.31■□□□□ 0.2
HDLBP-246ENST00000496569 CEMIPQ8WUJ3 1361 aa16.3■□□□□ 0.2
HDLBP-246ENST00000496569 TRAPPC3LQ5T215 181 aa16.3■□□□□ 0.2
HDLBP-246ENST00000496569 INTS5Q6P9B9 1019 aaKnown RBP16.3■□□□□ 0.2
HDLBP-246ENST00000496569 AFDNP55196 1824 aaKnown RBP16.29■□□□□ 0.2
HDLBP-246ENST00000496569 DCAF8L1A6NGE4 600 aa16.29■□□□□ 0.2
HDLBP-246ENST00000496569 FCHSD2O94868 740 aa16.29■□□□□ 0.2
HDLBP-246ENST00000496569 MMP10P09238 476 aa16.29■□□□□ 0.2
HDLBP-246ENST00000496569 CYP19A1P11511 503 aaPredicted RBP16.29■□□□□ 0.2
HDLBP-246ENST00000496569 ZNF496Q96IT1 587 aaPredicted RBP16.29■□□□□ 0.2
HDLBP-246ENST00000496569 ZBTB1Q9Y2K1 713 aa16.29■□□□□ 0.2
HDLBP-246ENST00000496569 GYS1P13807 737 aa16.28■□□□□ 0.2
HDLBP-246ENST00000496569 YY1P25490 414 aa16.28■□□□□ 0.2
HDLBP-246ENST00000496569 HMGB2P26583 209 aaKnown RBP16.28■□□□□ 0.2
HDLBP-246ENST00000496569 RFC4P35249 363 aa16.28■□□□□ 0.2
HDLBP-246ENST00000496569 CCDC87Q9NVE4 849 aa16.28■□□□□ 0.2
HDLBP-246ENST00000496569 KDM3BQ7LBC6 1761 aa16.28■□□□□ 0.2
HDLBP-246ENST00000496569 GPR162Q16538 588 aa16.27■□□□□ 0.2
HDLBP-246ENST00000496569 TTC5Q8N0Z6 440 aa16.27■□□□□ 0.2
HDLBP-246ENST00000496569 HEG1Q9ULI3 1381 aa16.26■□□□□ 0.19
HDLBP-246ENST00000496569 SOS1Q07889 1333 aaPredicted RBP16.26■□□□□ 0.19
HDLBP-246ENST00000496569 YBX3P16989 372 aaKnown RBP eCLIP16.26■□□□□ 0.19
HDLBP-246ENST00000496569 RALBP1Q15311 655 aa16.26■□□□□ 0.19
HDLBP-246ENST00000496569 ZNF790Q6PG37 636 aa16.26■□□□□ 0.19
HDLBP-246ENST00000496569 USP42Q9H9J4 1324 aaKnown RBP16.25■□□□□ 0.19
HDLBP-246ENST00000496569 BRCA1P38398 1863 aaKnown RBP16.25■□□□□ 0.19
HDLBP-246ENST00000496569 SCN7AQ01118 1682 aa16.25■□□□□ 0.19
HDLBP-246ENST00000496569 PRAMEF22A3QJZ6 481 aa16.25■□□□□ 0.19
HDLBP-246ENST00000496569 ADRA2BP18089 450 aa16.25■□□□□ 0.19
HDLBP-246ENST00000496569 FKBP8Q14318 412 aa16.25■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms