RNA–Protein interactions for RNA: ENST00000496323.1

SPTBN1-205, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

TSL 2

Gene SPTBN1, Length 2,225 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-205ENST00000496323 ABCA3Q99758 1704 aa17.31■□□□□ 0.36
SPTBN1-205ENST00000496323 CYP27B1O15528 508 aa17.31■□□□□ 0.36
SPTBN1-205ENST00000496323 PDE4AP27815 886 aa17.31■□□□□ 0.36
SPTBN1-205ENST00000496323 TOM1L2Q6ZVM7 507 aa17.31■□□□□ 0.36
SPTBN1-205ENST00000496323 CHMP4BQ9H444 224 aaKnown RBP17.31■□□□□ 0.36
SPTBN1-205ENST00000496323 C1orf115Q9H7X2 142 aa17.31■□□□□ 0.36
SPTBN1-205ENST00000496323 ADAMTS7Q9UKP4 1686 aa17.3■□□□□ 0.36
SPTBN1-205ENST00000496323 HDGFL1Q5TGJ6 251 aa17.3■□□□□ 0.36
SPTBN1-205ENST00000496323 IFNL2Q8IZJ0 200 aa17.3■□□□□ 0.36
SPTBN1-205ENST00000496323 ROBO1Q9Y6N7 1651 aa17.3■□□□□ 0.36
SPTBN1-205ENST00000496323 HOXB7P09629 217 aa17.29■□□□□ 0.36
SPTBN1-205ENST00000496323 BACH2Q9BYV9 841 aa17.29■□□□□ 0.36
SPTBN1-205ENST00000496323 PDZRN3Q9UPQ7 1066 aa17.29■□□□□ 0.36
SPTBN1-205ENST00000496323 F6X3S4 739 aa17.29■□□□□ 0.36
SPTBN1-205ENST00000496323 FLIIQ13045 1269 aa17.29■□□□□ 0.36
SPTBN1-205ENST00000496323 LARP1Q6PKG0 1096 aaKnown RBP17.29■□□□□ 0.36
SPTBN1-205ENST00000496323 HEG1Q9ULI3 1381 aa17.29■□□□□ 0.36
SPTBN1-205ENST00000496323 KDM3BQ7LBC6 1761 aa17.28■□□□□ 0.36
SPTBN1-205ENST00000496323 CARD10Q9BWT7 1032 aa17.28■□□□□ 0.36
SPTBN1-205ENST00000496323 AHDC1Q5TGY3 1603 aaPredicted RBP17.28■□□□□ 0.36
SPTBN1-205ENST00000496323 SIRT2Q8IXJ6 389 aa17.28■□□□□ 0.36
SPTBN1-205ENST00000496323 SMC5Q8IY18 1101 aa17.28■□□□□ 0.36
SPTBN1-205ENST00000496323 SLC52A2Q9HAB3 445 aa17.28■□□□□ 0.36
SPTBN1-205ENST00000496323 STRN4Q9NRL3 753 aa17.28■□□□□ 0.36
SPTBN1-205ENST00000496323 EIF2S2P20042 333 aaKnown RBP17.27■□□□□ 0.35
SPTBN1-205ENST00000496323 DCAF5Q96JK2 942 aa17.27■□□□□ 0.35
SPTBN1-205ENST00000496323 GIGYF1O75420 1035 aaPredicted RBP17.26■□□□□ 0.35
SPTBN1-205ENST00000496323 NFATC2IPQ8NCF5 419 aa17.26■□□□□ 0.35
SPTBN1-205ENST00000496323 EVA1CP58658 441 aa17.25■□□□□ 0.35
SPTBN1-205ENST00000496323 FKBP5Q13451 457 aaPredicted RBP17.25■□□□□ 0.35
SPTBN1-205ENST00000496323 PHAXQ9H814 394 aaKnown RBP17.25■□□□□ 0.35
SPTBN1-205ENST00000496323 PRAMEF22A3QJZ6 481 aa17.24■□□□□ 0.35
SPTBN1-205ENST00000496323 SLC39A6Q13433 755 aa17.24■□□□□ 0.35
SPTBN1-205ENST00000496323 SLC4A10Q6U841 1118 aa17.24■□□□□ 0.35
SPTBN1-205ENST00000496323 PKD1L3Q7Z443 1732 aa17.24■□□□□ 0.35
SPTBN1-205ENST00000496323 MEIS3Q99687 375 aa17.24■□□□□ 0.35
SPTBN1-205ENST00000496323 CHPF2Q9P2E5 772 aa17.24■□□□□ 0.35
SPTBN1-205ENST00000496323 IL2RBP14784 551 aa17.24■□□□□ 0.35
SPTBN1-205ENST00000496323 CCT4P50991 539 aaKnown RBP17.24■□□□□ 0.35
SPTBN1-205ENST00000496323 ZNF790Q6PG37 636 aa17.24■□□□□ 0.35
SPTBN1-205ENST00000496323 ZCRB1Q8TBF4 217 aaKnown RBP17.24■□□□□ 0.35
SPTBN1-205ENST00000496323 BTG4Q9NY30 223 aa17.24■□□□□ 0.35
SPTBN1-205ENST00000496323 HSP90AB1P08238 724 aaKnown RBP17.23■□□□□ 0.35
SPTBN1-205ENST00000496323 C8orf34Q49A92 452 aa17.23■□□□□ 0.35
SPTBN1-205ENST00000496323 SIPA1L3O60292 1781 aaPredicted RBP17.23■□□□□ 0.35
SPTBN1-205ENST00000496323 MRC1P22897 1456 aa17.22■□□□□ 0.35
SPTBN1-205ENST00000496323 PCDH11XQ9BZA7 1347 aa17.22■□□□□ 0.35
SPTBN1-205ENST00000496323 PCDH11YQ9BZA8 1340 aa17.22■□□□□ 0.35
SPTBN1-205ENST00000496323 ATP10DQ9P241 1426 aa17.21■□□□□ 0.35
SPTBN1-205ENST00000496323 ANXA1P04083 346 aa17.21■□□□□ 0.35
SPTBN1-205ENST00000496323 FAM161AQ3B820 660 aa17.21■□□□□ 0.35
SPTBN1-205ENST00000496323 CHMP4AQ9BY43 222 aa17.21■□□□□ 0.35
SPTBN1-205ENST00000496323 NUCB1Q02818 461 aa17.2■□□□□ 0.34
SPTBN1-205ENST00000496323 COL22A1Q8NFW1 1626 aaPredicted RBP17.2■□□□□ 0.34
SPTBN1-205ENST00000496323 USP35Q9P2H5 1018 aa17.2■□□□□ 0.34
SPTBN1-205ENST00000496323 SCN11AQ9UI33 1791 aa17.19■□□□□ 0.34
SPTBN1-205ENST00000496323 NKX1-1Q15270 411 aaPredicted RBP17.19■□□□□ 0.34
SPTBN1-205ENST00000496323 PROSER3Q2NL68 480 aa17.19■□□□□ 0.34
SPTBN1-205ENST00000496323 DBF4Q9UBU7 674 aaPredicted RBP17.19■□□□□ 0.34
SPTBN1-205ENST00000496323 CABP4P57796 275 aa17.19■□□□□ 0.34
SPTBN1-205ENST00000496323 CEP85Q6P2H3 762 aa17.19■□□□□ 0.34
SPTBN1-205ENST00000496323 ANKRD44Q8N8A2 993 aa17.19■□□□□ 0.34
SPTBN1-205ENST00000496323 GCC1Q96CN9 775 aa17.19■□□□□ 0.34
SPTBN1-205ENST00000496323 ZNF496Q96IT1 587 aaPredicted RBP17.19■□□□□ 0.34
SPTBN1-205ENST00000496323 VIRMAQ69YN4 1812 aaKnown RBP17.18■□□□□ 0.34
SPTBN1-205ENST00000496323 PARP4Q9UKK3 1724 aaKnown RBP17.17■□□□□ 0.34
SPTBN1-205ENST00000496323 TOM1O60784 492 aa17.17■□□□□ 0.34
SPTBN1-205ENST00000496323 PIP4K2BP78356 416 aa17.17■□□□□ 0.34
SPTBN1-205ENST00000496323 RPAP2Q8IXW5 612 aaPredicted RBP17.17■□□□□ 0.34
SPTBN1-205ENST00000496323 PXDNLA1KZ92 1463 aa17.17■□□□□ 0.34
SPTBN1-205ENST00000496323 DDX54Q8TDD1 881 aaKnown RBP17.17■□□□□ 0.34
SPTBN1-205ENST00000496323 COL16A1Q07092 1604 aaPredicted RBP17.17■□□□□ 0.34
SPTBN1-205ENST00000496323 PDIA6Q15084 440 aa17.16■□□□□ 0.34
SPTBN1-205ENST00000496323 CHD1LQ86WJ1 897 aa17.16■□□□□ 0.34
SPTBN1-205ENST00000496323 PI4KAP2A4QPH2 592 aa17.16■□□□□ 0.34
SPTBN1-205ENST00000496323 PI4KAP1Q8N8J0 262 aa17.16■□□□□ 0.34
SPTBN1-205ENST00000496323 ADCY9O60503 1353 aa17.15■□□□□ 0.34
SPTBN1-205ENST00000496323 COL14A1Q05707 1796 aaKnown RBP17.15■□□□□ 0.34
SPTBN1-205ENST00000496323 ERVV-2B6SEH9 535 aa17.15■□□□□ 0.34
SPTBN1-205ENST00000496323 LNPKQ9C0E8 428 aa17.15■□□□□ 0.34
SPTBN1-205ENST00000496323 DCTPP1Q9H773 170 aa17.15■□□□□ 0.34
SPTBN1-205ENST00000496323 TTC5Q8N0Z6 440 aa17.15■□□□□ 0.34
SPTBN1-205ENST00000496323 USP44Q9H0E7 712 aa17.15■□□□□ 0.34
SPTBN1-205ENST00000496323 ANKRD45Q5TZF3 282 aa17.14■□□□□ 0.33
SPTBN1-205ENST00000496323 DNAAF4Q8WXU2 420 aa17.14■□□□□ 0.33
SPTBN1-205ENST00000496323 DDX21Q9NR30 783 aaKnown RBP eCLIP17.14■□□□□ 0.33
SPTBN1-205ENST00000496323 DISP2A7MBM2 1401 aa17.13■□□□□ 0.33
SPTBN1-205ENST00000496323 ADAMTS2O95450 1211 aa17.13■□□□□ 0.33
SPTBN1-205ENST00000496323 BEND3Q5T5X7 828 aa17.13■□□□□ 0.33
SPTBN1-205ENST00000496323 FMNL2Q96PY5 1086 aa17.13■□□□□ 0.33
SPTBN1-205ENST00000496323 GNAI2P04899 355 aa17.13■□□□□ 0.33
SPTBN1-205ENST00000496323 SNRPA1P09661 255 aaKnown RBP17.13■□□□□ 0.33
SPTBN1-205ENST00000496323 HYPKQ9NX55 129 aa17.13■□□□□ 0.33
SPTBN1-205ENST00000496323 USP16Q9Y5T5 823 aa17.13■□□□□ 0.33
SPTBN1-205ENST00000496323 PHLPP1O60346 1717 aa17.12■□□□□ 0.33
SPTBN1-205ENST00000496323 GNAI3P08754 354 aa17.12■□□□□ 0.33
SPTBN1-205ENST00000496323 SRCIN1Q9C0H9 1055 aa17.12■□□□□ 0.33
SPTBN1-205ENST00000496323 SHANK3Q9BYB0 1731 aa17.11■□□□□ 0.33
SPTBN1-205ENST00000496323 UBAP1LF5GYI3 381 aa17.11■□□□□ 0.33
SPTBN1-205ENST00000496323 MSH5O43196 834 aa17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 70 ms