RNA–Protein interactions for RNA: ENST00000496050.1

SSR3-208, Transcript of signal sequence receptor subunit 3, humanhuman

TSL 4 BASIC

Gene SSR3, Length 579 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3-208ENST00000496050 SCG3Q8WXD2 468 aaKnown RBP9.36□□□□□ -0.91
SSR3-208ENST00000496050 XAGE2Q96GT9 111 aa9.36□□□□□ -0.91
SSR3-208ENST00000496050 ABL1P00519 1130 aa9.35□□□□□ -0.91
SSR3-208ENST00000496050 SCNN1AP37088 669 aa9.35□□□□□ -0.91
SSR3-208ENST00000496050 RANGAP1P46060 587 aaPredicted RBP9.35□□□□□ -0.91
SSR3-208ENST00000496050 CYP4X1Q8N118 509 aa9.35□□□□□ -0.91
SSR3-208ENST00000496050 VTI1AQ96AJ9 217 aa9.35□□□□□ -0.91
SSR3-208ENST00000496050 EGFL7Q9UHF1 273 aa9.35□□□□□ -0.91
SSR3-208ENST00000496050 A6NJY4 79 aa9.34□□□□□ -0.91
SSR3-208ENST00000496050 FOXO3O43524 673 aa9.34□□□□□ -0.91
SSR3-208ENST00000496050 STAU1O95793 577 aaKnown RBP9.34□□□□□ -0.91
SSR3-208ENST00000496050 SMTNP53814 917 aa9.34□□□□□ -0.91
SSR3-208ENST00000496050 COL26A1Q96A83 441 aa9.34□□□□□ -0.91
SSR3-208ENST00000496050 ADH1AP07327 375 aa9.33□□□□□ -0.92
SSR3-208ENST00000496050 FKBP5Q13451 457 aaPredicted RBP9.33□□□□□ -0.92
SSR3-208ENST00000496050 BIN2Q9UBW5 565 aaPredicted RBP9.33□□□□□ -0.92
SSR3-208ENST00000496050 EPHA4P54764 986 aa9.32□□□□□ -0.92
SSR3-208ENST00000496050 GTF3C2Q8WUA4 911 aaPredicted RBP9.32□□□□□ -0.92
SSR3-208ENST00000496050 CHMP7Q8WUX9 453 aaPredicted RBP9.32□□□□□ -0.92
SSR3-208ENST00000496050 CNKSR1Q969H4 720 aa9.32□□□□□ -0.92
SSR3-208ENST00000496050 ESYT1Q9BSJ8 1104 aa9.32□□□□□ -0.92
SSR3-208ENST00000496050 MKNK1Q9BUB5 465 aa9.32□□□□□ -0.92
SSR3-208ENST00000496050 ARHGEF10LQ9HCE6 1279 aa9.32□□□□□ -0.92
SSR3-208ENST00000496050 SCHIP1Q9P0W5 487 aaPredicted RBP9.32□□□□□ -0.92
SSR3-208ENST00000496050 A0A1W2PRU2 124 aa9.31□□□□□ -0.92
SSR3-208ENST00000496050 CDK2AP1O14519 115 aa9.31□□□□□ -0.92
SSR3-208ENST00000496050 PPP1R12BO60237 982 aaPredicted RBP9.31□□□□□ -0.92
SSR3-208ENST00000496050 GDF9O60383 454 aa9.31□□□□□ -0.92
SSR3-208ENST00000496050 ICMTO60725 284 aa9.31□□□□□ -0.92
SSR3-208ENST00000496050 ZIC2O95409 532 aaPredicted RBP9.31□□□□□ -0.92
SSR3-208ENST00000496050 PTGIRP43119 386 aa9.31□□□□□ -0.92
SSR3-208ENST00000496050 WDR4P57081 412 aaKnown RBP9.31□□□□□ -0.92
SSR3-208ENST00000496050 FKBP4Q02790 459 aaKnown RBP eCLIP9.31□□□□□ -0.92
SSR3-208ENST00000496050 SF3B2Q13435 895 aaKnown RBP9.31□□□□□ -0.92
SSR3-208ENST00000496050 MTFR1Q15390 333 aa9.31□□□□□ -0.92
SSR3-208ENST00000496050 Q6ZVU0 165 aa9.31□□□□□ -0.92
SSR3-208ENST00000496050 TSPAN10Q9H1Z9 355 aaPredicted RBP9.31□□□□□ -0.92
SSR3-208ENST00000496050 RAB6BQ9NRW1 208 aa9.31□□□□□ -0.92
SSR3-208ENST00000496050 SEPT3Q9UH03 358 aa9.31□□□□□ -0.92
SSR3-208ENST00000496050 CHMP3Q9Y3E7 222 aa9.31□□□□□ -0.92
SSR3-208ENST00000496050 J3QL48 77 aa9.3□□□□□ -0.92
SSR3-208ENST00000496050 CBLBQ13191 982 aa9.3□□□□□ -0.92
SSR3-208ENST00000496050 STAG2Q8N3U4 1231 aa9.3□□□□□ -0.92
SSR3-208ENST00000496050 ITPKCQ96DU7 683 aa9.3□□□□□ -0.92
SSR3-208ENST00000496050 NLRP3Q96P20 1036 aa9.3□□□□□ -0.92
SSR3-208ENST00000496050 KLF16Q9BXK1 252 aaPredicted RBP9.3□□□□□ -0.92
SSR3-208ENST00000496050 C21orf2O43822 256 aa9.29□□□□□ -0.92
SSR3-208ENST00000496050 IL2RAP01589 272 aa9.29□□□□□ -0.92
SSR3-208ENST00000496050 ERCC3P19447 782 aa9.29□□□□□ -0.92
SSR3-208ENST00000496050 FOXK2Q01167 660 aa9.29□□□□□ -0.92
SSR3-208ENST00000496050 CLN3Q13286 438 aa9.29□□□□□ -0.92
SSR3-208ENST00000496050 NAA30Q147X3 362 aaPredicted RBP9.29□□□□□ -0.92
SSR3-208ENST00000496050 SLC9A9Q8IVB4 645 aa9.29□□□□□ -0.92
SSR3-208ENST00000496050 GLYCTKQ8IVS8 523 aa9.29□□□□□ -0.92
SSR3-208ENST00000496050 PURBQ96QR8 312 aaKnown RBP9.29□□□□□ -0.92
SSR3-208ENST00000496050 MARSP56192 900 aaKnown RBP9.28□□□□□ -0.92
SSR3-208ENST00000496050 CENPCQ03188 943 aa9.28□□□□□ -0.92
SSR3-208ENST00000496050 TLR1Q15399 786 aa9.28□□□□□ -0.92
SSR3-208ENST00000496050 FOXD4L5Q5VV16 416 aaPredicted RBP9.28□□□□□ -0.92
SSR3-208ENST00000496050 CAPN12Q6ZSI9 719 aa9.28□□□□□ -0.92
SSR3-208ENST00000496050 FOXD4L4Q8WXT5 416 aaPredicted RBP9.28□□□□□ -0.92
SSR3-208ENST00000496050 ANO2Q9NQ90 1003 aa9.28□□□□□ -0.92
SSR3-208ENST00000496050 TOR4AQ9NXH8 423 aa9.28□□□□□ -0.92
SSR3-208ENST00000496050 AMOTL2Q9Y2J4 779 aa9.28□□□□□ -0.92
SSR3-208ENST00000496050 MEN1O00255 615 aa9.27□□□□□ -0.93
SSR3-208ENST00000496050 PSMA6P60900 246 aaKnown RBP9.27□□□□□ -0.93
SSR3-208ENST00000496050 ZNF211Q13398 564 aaPredicted RBP9.27□□□□□ -0.93
SSR3-208ENST00000496050 NBPF15Q8N660 670 aa9.27□□□□□ -0.93
SSR3-208ENST00000496050 KDF1Q8NAX2 398 aaPredicted RBP9.27□□□□□ -0.93
SSR3-208ENST00000496050 C2orf49Q9BVC5 232 aaPredicted RBP9.27□□□□□ -0.93
SSR3-208ENST00000496050 ZFAND3Q9H8U3 227 aa9.27□□□□□ -0.93
SSR3-208ENST00000496050 HRH3Q9Y5N1 445 aa9.27□□□□□ -0.93
SSR3-208ENST00000496050 DNMT3AQ9Y6K1 912 aaPredicted RBP9.27□□□□□ -0.93
SSR3-208ENST00000496050 H3BRB1 525 aa9.26□□□□□ -0.93
SSR3-208ENST00000496050 TNFRSF10AO00220 468 aa9.26□□□□□ -0.93
SSR3-208ENST00000496050 SMPD1P17405 629 aa9.26□□□□□ -0.93
SSR3-208ENST00000496050 GTF2E1P29083 439 aaPredicted RBP9.26□□□□□ -0.93
SSR3-208ENST00000496050 RELBQ01201 579 aa9.26□□□□□ -0.93
SSR3-208ENST00000496050 TBCELQ5QJ74 424 aa9.26□□□□□ -0.93
SSR3-208ENST00000496050 AGBL1Q96MI9 1066 aa9.26□□□□□ -0.93
SSR3-208ENST00000496050 TUT1Q9H6E5 874 aaKnown RBP9.26□□□□□ -0.93
SSR3-208ENST00000496050 FAM13AO94988 1023 aa9.25□□□□□ -0.93
SSR3-208ENST00000496050 TIMP2P16035 220 aa9.25□□□□□ -0.93
SSR3-208ENST00000496050 PRR20EP86478 221 aa9.25□□□□□ -0.93
SSR3-208ENST00000496050 PRR20CP86479 221 aa9.25□□□□□ -0.93
SSR3-208ENST00000496050 PRR20DP86480 221 aa9.25□□□□□ -0.93
SSR3-208ENST00000496050 PRR20BP86481 221 aa9.25□□□□□ -0.93
SSR3-208ENST00000496050 PRR20AP86496 221 aa9.25□□□□□ -0.93
SSR3-208ENST00000496050 HELQQ8TDG4 1101 aa9.25□□□□□ -0.93
SSR3-208ENST00000496050 C16orf46Q6P387 395 aa9.24□□□□□ -0.93
SSR3-208ENST00000496050 ZSCAN10Q96SZ4 725 aaPredicted RBP9.24□□□□□ -0.93
SSR3-208ENST00000496050 ZNF395Q9H8N7 513 aaPredicted RBP9.24□□□□□ -0.93
SSR3-208ENST00000496050 SERTM1A2A2V5 107 aa9.23□□□□□ -0.93
SSR3-208ENST00000496050 TEAD4Q15561 434 aa9.23□□□□□ -0.93
SSR3-208ENST00000496050 PPARGC1BQ86YN6 1023 aaKnown RBP9.23□□□□□ -0.93
SSR3-208ENST00000496050 TSEN34Q9BSV6 310 aaKnown RBP9.23□□□□□ -0.93
SSR3-208ENST00000496050 CABP1Q9NZU7 370 aa9.23□□□□□ -0.93
SSR3-208ENST00000496050 IQSEC3Q9UPP2 1182 aaPredicted RBP9.23□□□□□ -0.93
SSR3-208ENST00000496050 NOS2P35228 1153 aa9.22□□□□□ -0.93
SSR3-208ENST00000496050 TMEM214Q6NUQ4 689 aaKnown RBP9.22□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms