RNA–Protein interactions for RNA: ENST00000495955.5

GAPVD1-219, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 1 (best) BASIC

Gene GAPVD1, Length 5,309 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-219ENST00000495955 GPTP24298 496 aa11.73□□□□□ -0.53
GAPVD1-219ENST00000495955 A0A087WZG4 1122 aa11.72□□□□□ -0.53
GAPVD1-219ENST00000495955 SSH1Q8WYL5 1049 aa11.72□□□□□ -0.53
GAPVD1-219ENST00000495955 ADAMTSL3P82987 1691 aa11.72□□□□□ -0.53
GAPVD1-219ENST00000495955 GNAI2P04899 355 aa11.72□□□□□ -0.53
GAPVD1-219ENST00000495955 SEPT12Q8IYM1 358 aa11.72□□□□□ -0.53
GAPVD1-219ENST00000495955 NEUROD6Q96NK8 337 aa11.72□□□□□ -0.53
GAPVD1-219ENST00000495955 CCDC85AQ96PX6 553 aaPredicted RBP11.72□□□□□ -0.53
GAPVD1-219ENST00000495955 KIAA1210Q9ULL0 1709 aa11.72□□□□□ -0.53
GAPVD1-219ENST00000495955 DCCP43146 1447 aa11.72□□□□□ -0.53
GAPVD1-219ENST00000495955 FGD1P98174 961 aa11.72□□□□□ -0.53
GAPVD1-219ENST00000495955 SLC52A2Q9HAB3 445 aa11.72□□□□□ -0.53
GAPVD1-219ENST00000495955 CNNM1Q9NRU3 951 aa11.72□□□□□ -0.53
GAPVD1-219ENST00000495955 AXIN2Q9Y2T1 843 aa11.72□□□□□ -0.53
GAPVD1-219ENST00000495955 KRT27Q7Z3Y8 459 aa11.71□□□□□ -0.53
GAPVD1-219ENST00000495955 PHKG2P15735 406 aa11.71□□□□□ -0.53
GAPVD1-219ENST00000495955 HSP90AB3PQ58FF7 597 aa11.71□□□□□ -0.53
GAPVD1-219ENST00000495955 KIAA1211Q6ZU35 1233 aa11.71□□□□□ -0.53
GAPVD1-219ENST00000495955 HSP90AB4PQ58FF6 505 aa11.71□□□□□ -0.54
GAPVD1-219ENST00000495955 CHPF2Q9P2E5 772 aa11.71□□□□□ -0.54
GAPVD1-219ENST00000495955 MYO5BQ9ULV0 1848 aa11.71□□□□□ -0.54
GAPVD1-219ENST00000495955 F6X3S4 739 aa11.71□□□□□ -0.54
GAPVD1-219ENST00000495955 RTCBQ9Y3I0 505 aaKnown RBP11.71□□□□□ -0.54
GAPVD1-219ENST00000495955 ALDH1L2Q3SY69 923 aa11.7□□□□□ -0.54
GAPVD1-219ENST00000495955 TRMT112Q9UI30 125 aaKnown RBP11.7□□□□□ -0.54
GAPVD1-219ENST00000495955 MST1RQ04912 1400 aa11.7□□□□□ -0.54
GAPVD1-219ENST00000495955 CCDC27Q2M243 656 aa11.7□□□□□ -0.54
GAPVD1-219ENST00000495955 BAG6P46379 1132 aa11.7□□□□□ -0.54
GAPVD1-219ENST00000495955 FLIIQ13045 1269 aa11.7□□□□□ -0.54
GAPVD1-219ENST00000495955 ZNF790Q6PG37 636 aa11.7□□□□□ -0.54
GAPVD1-219ENST00000495955 CCDC57Q2TAC2 916 aa11.7□□□□□ -0.54
GAPVD1-219ENST00000495955 RARSP54136 660 aaKnown RBP11.69□□□□□ -0.54
GAPVD1-219ENST00000495955 NAP1L2Q9ULW6 460 aaPredicted RBP11.69□□□□□ -0.54
GAPVD1-219ENST00000495955 MAP3K2Q9Y2U5 619 aa11.69□□□□□ -0.54
GAPVD1-219ENST00000495955 THRAP3Q9Y2W1 955 aaKnown RBP11.69□□□□□ -0.54
GAPVD1-219ENST00000495955 KIF24Q5T7B8 1368 aa11.69□□□□□ -0.54
GAPVD1-219ENST00000495955 GNPATO15228 680 aa11.69□□□□□ -0.54
GAPVD1-219ENST00000495955 SURF6O75683 361 aaKnown RBP11.69□□□□□ -0.54
GAPVD1-219ENST00000495955 DNAAF4Q8WXU2 420 aa11.69□□□□□ -0.54
GAPVD1-219ENST00000495955 MPHOSPH8Q99549 860 aa11.69□□□□□ -0.54
GAPVD1-219ENST00000495955 SOS2Q07890 1332 aaPredicted RBP11.69□□□□□ -0.54
GAPVD1-219ENST00000495955 C8orf58Q8NAV2 365 aa11.69□□□□□ -0.54
GAPVD1-219ENST00000495955 CPSF1Q10570 1443 aaKnown RBP11.69□□□□□ -0.54
GAPVD1-219ENST00000495955 ATP5J2-PTCD1G3V325 749 aa11.68□□□□□ -0.54
GAPVD1-219ENST00000495955 TRIM37O94972 964 aa11.68□□□□□ -0.54
GAPVD1-219ENST00000495955 RILPL2Q969X0 211 aa11.68□□□□□ -0.54
GAPVD1-219ENST00000495955 SIL1Q9H173 461 aa11.68□□□□□ -0.54
GAPVD1-219ENST00000495955 STK32BQ9NY57 414 aa11.68□□□□□ -0.54
GAPVD1-219ENST00000495955 TAOK2Q9UL54 1235 aa11.68□□□□□ -0.54
GAPVD1-219ENST00000495955 IGSF1Q8N6C5 1336 aa11.68□□□□□ -0.54
GAPVD1-219ENST00000495955 ERVV-2B6SEH9 535 aa11.68□□□□□ -0.54
GAPVD1-219ENST00000495955 PDE3AQ14432 1141 aa11.68□□□□□ -0.54
GAPVD1-219ENST00000495955 KRT24Q2M2I5 525 aa11.68□□□□□ -0.54
GAPVD1-219ENST00000495955 ISY1Q9ULR0 285 aaKnown RBP11.68□□□□□ -0.54
GAPVD1-219ENST00000495955 FAM196AQ6ZSG2 479 aa11.68□□□□□ -0.54
GAPVD1-219ENST00000495955 XAGE3Q8WTP9 111 aa11.68□□□□□ -0.54
GAPVD1-219ENST00000495955 MED14O60244 1454 aa11.68□□□□□ -0.54
GAPVD1-219ENST00000495955 LRRC7Q96NW7 1537 aa11.68□□□□□ -0.54
GAPVD1-219ENST00000495955 BLMP54132 1417 aaPredicted RBP11.68□□□□□ -0.54
GAPVD1-219ENST00000495955 COPS6Q7L5N1 327 aa11.67□□□□□ -0.54
GAPVD1-219ENST00000495955 TBC1D2BQ9UPU7 963 aa11.67□□□□□ -0.54
GAPVD1-219ENST00000495955 ANKRD13DQ6ZTN6 518 aa11.67□□□□□ -0.54
GAPVD1-219ENST00000495955 CENPQQ7L2Z9 268 aaPredicted RBP11.67□□□□□ -0.54
GAPVD1-219ENST00000495955 MCCP23508 829 aa11.67□□□□□ -0.54
GAPVD1-219ENST00000495955 GJD4Q96KN9 370 aaPredicted RBP11.67□□□□□ -0.54
GAPVD1-219ENST00000495955 PI4KAP2A4QPH2 592 aa11.67□□□□□ -0.54
GAPVD1-219ENST00000495955 RBM6P78332 1123 aaKnown RBP11.67□□□□□ -0.54
GAPVD1-219ENST00000495955 DZIP3Q86Y13 1208 aaKnown RBP11.67□□□□□ -0.54
GAPVD1-219ENST00000495955 PI4KAP1Q8N8J0 262 aa11.67□□□□□ -0.54
GAPVD1-219ENST00000495955 USP31Q70CQ4 1352 aa11.67□□□□□ -0.54
GAPVD1-219ENST00000495955 TMEM57Q8N5G2 664 aa11.66□□□□□ -0.54
GAPVD1-219ENST00000495955 MVPQ14764 893 aaKnown RBP11.66□□□□□ -0.54
GAPVD1-219ENST00000495955 TRAPPC3LQ5T215 181 aa11.66□□□□□ -0.54
GAPVD1-219ENST00000495955 NBPF5PQ86XG9 351 aaPredicted RBP11.66□□□□□ -0.54
GAPVD1-219ENST00000495955 SETDB2Q96T68 719 aa11.66□□□□□ -0.54
GAPVD1-219ENST00000495955 NOL10Q9BSC4 688 aaKnown RBP11.66□□□□□ -0.54
GAPVD1-219ENST00000495955 PPP1R42Q7Z4L9 355 aa11.66□□□□□ -0.54
GAPVD1-219ENST00000495955 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.66□□□□□ -0.549e-7■■□□□ 13.5
GAPVD1-219ENST00000495955 IGHMBP2P38935 993 aaKnown RBP11.65□□□□□ -0.54
GAPVD1-219ENST00000495955 RPGRQ92834 1020 aaKnown RBP11.65□□□□□ -0.54
GAPVD1-219ENST00000495955 CDK12Q9NYV4 1490 aaPredicted RBP11.65□□□□□ -0.54
GAPVD1-219ENST00000495955 SRGAP3O43295 1099 aa11.65□□□□□ -0.54
GAPVD1-219ENST00000495955 PTPRCP08575 1304 aa11.65□□□□□ -0.54
GAPVD1-219ENST00000495955 TSPYL6Q8N831 410 aa11.65□□□□□ -0.55
GAPVD1-219ENST00000495955 CWC25Q9NXE8 425 aaPredicted RBP11.65□□□□□ -0.55
GAPVD1-219ENST00000495955 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.65□□□□□ -0.55
GAPVD1-219ENST00000495955 TRIM35Q9UPQ4 493 aa11.65□□□□□ -0.55
GAPVD1-219ENST00000495955 AAMPQ13685 434 aa11.64□□□□□ -0.55
GAPVD1-219ENST00000495955 ZNF219Q9P2Y4 722 aaPredicted RBP11.64□□□□□ -0.55
GAPVD1-219ENST00000495955 IL17REQ8NFR9 667 aa11.64□□□□□ -0.55
GAPVD1-219ENST00000495955 NIP7Q9Y221 180 aaKnown RBP eCLIP11.64□□□□□ -0.55
GAPVD1-219ENST00000495955 ST5P78524 1137 aa11.64□□□□□ -0.55
GAPVD1-219ENST00000495955 DNAJC10Q8IXB1 793 aa11.63□□□□□ -0.55
GAPVD1-219ENST00000495955 CLASRPQ8N2M8 674 aaKnown RBP11.63□□□□□ -0.55
GAPVD1-219ENST00000495955 FBXO41Q8TF61 875 aa11.63□□□□□ -0.55
GAPVD1-219ENST00000495955 JARID2Q92833 1246 aaPredicted RBP11.63□□□□□ -0.55
GAPVD1-219ENST00000495955 LNPKQ9C0E8 428 aa11.63□□□□□ -0.55
GAPVD1-219ENST00000495955 POLD1P28340 1107 aa11.63□□□□□ -0.55
GAPVD1-219ENST00000495955 ZNF496Q96IT1 587 aaPredicted RBP11.63□□□□□ -0.55
GAPVD1-219ENST00000495955 CRB1P82279 1406 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms