RNA–Protein interactions for RNA: ENST00000495520.5

LINC01558-202, Transcript of long intergenic non-protein coding RNA 1558, humanhuman

TSL 2 BASIC

Gene LINC01558, Length 1,652 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01558-202ENST00000495520 PCDHB15Q9Y5E8 787 aa25.57■■□□□ 1.68
LINC01558-202ENST00000495520 MEGF6O75095 1541 aa25.56■■□□□ 1.68
LINC01558-202ENST00000495520 TATP17735 454 aaPredicted RBP25.56■■□□□ 1.68
LINC01558-202ENST00000495520 ABCC4O15439 1325 aa25.55■■□□□ 1.68
LINC01558-202ENST00000495520 OVOS2A0A0G2JMS6 1433 aa25.55■■□□□ 1.68
LINC01558-202ENST00000495520 ZNF530Q6P9A1 599 aaPredicted RBP25.54■■□□□ 1.68
LINC01558-202ENST00000495520 API5Q9BZZ5 524 aaKnown RBP25.53■■□□□ 1.68
LINC01558-202ENST00000495520 UNC5CLQ8IV45 518 aa25.52■■□□□ 1.68
LINC01558-202ENST00000495520 ITPRIPQ8IWB1 547 aa25.52■■□□□ 1.68
LINC01558-202ENST00000495520 ZBTB40Q9NUA8 1239 aa25.52■■□□□ 1.68
LINC01558-202ENST00000495520 LGR6Q9HBX8 967 aa25.52■■□□□ 1.68
LINC01558-202ENST00000495520 IL2RBP14784 551 aa25.51■■□□□ 1.67
LINC01558-202ENST00000495520 FNBP4Q8N3X1 1017 aaPredicted RBP25.51■■□□□ 1.67
LINC01558-202ENST00000495520 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP25.51■■□□□ 1.67
LINC01558-202ENST00000495520 CCDC9Q9Y3X0 531 aaKnown RBP25.51■■□□□ 1.67
LINC01558-202ENST00000495520 BCL9LQ86UU0 1499 aa25.5■■□□□ 1.67
LINC01558-202ENST00000495520 USP21Q9UK80 565 aa25.49■■□□□ 1.67
LINC01558-202ENST00000495520 PARP4Q9UKK3 1724 aaKnown RBP25.49■■□□□ 1.67
LINC01558-202ENST00000495520 ADAMTS7Q9UKP4 1686 aa25.48■■□□□ 1.67
LINC01558-202ENST00000495520 RNMTO43148 476 aaKnown RBP25.48■■□□□ 1.67
LINC01558-202ENST00000495520 C1orf141Q5JVX7 400 aa25.48■■□□□ 1.67
LINC01558-202ENST00000495520 CHMP4BQ9H444 224 aaKnown RBP25.48■■□□□ 1.67
LINC01558-202ENST00000495520 SPG7Q9UQ90 795 aa25.48■■□□□ 1.67
LINC01558-202ENST00000495520 PTPRCP08575 1304 aa25.48■■□□□ 1.67
LINC01558-202ENST00000495520 SPATA31A1Q5TZJ5 1347 aa25.48■■□□□ 1.67
LINC01558-202ENST00000495520 ZBTB7BO15156 539 aaPredicted RBP25.47■■□□□ 1.67
LINC01558-202ENST00000495520 RWDD1Q9H446 243 aaPredicted RBP25.47■■□□□ 1.67
LINC01558-202ENST00000495520 RGS12O14924 1447 aa25.47■■□□□ 1.67
LINC01558-202ENST00000495520 AFF2P51816 1311 aa25.46■■□□□ 1.67
LINC01558-202ENST00000495520 HDAC1Q13547 482 aaPredicted RBP25.45■■□□□ 1.67
LINC01558-202ENST00000495520 SPATA31A5Q5VU36 1347 aa25.45■■□□□ 1.67
LINC01558-202ENST00000495520 SPATA31A7Q8IWB4 1347 aa25.45■■□□□ 1.67
LINC01558-202ENST00000495520 PKD1L3Q7Z443 1732 aa25.44■■□□□ 1.66
LINC01558-202ENST00000495520 INTS3Q68E01 1043 aaKnown RBP25.44■■□□□ 1.66
LINC01558-202ENST00000495520 MPRIPQ6WCQ1 1025 aa25.44■■□□□ 1.66
LINC01558-202ENST00000495520 KDM3BQ7LBC6 1761 aa25.44■■□□□ 1.66
LINC01558-202ENST00000495520 VPS72Q15906 364 aa25.43■■□□□ 1.66
LINC01558-202ENST00000495520 TNKS1BP1Q9C0C2 1729 aaKnown RBP25.42■■□□□ 1.66
LINC01558-202ENST00000495520 SLC4A2P04920 1241 aa25.42■■□□□ 1.66
LINC01558-202ENST00000495520 EIF4A1P60842 406 aaKnown RBP25.42■■□□□ 1.66
LINC01558-202ENST00000495520 SKAP1Q86WV1 359 aa25.42■■□□□ 1.66
LINC01558-202ENST00000495520 ZCRB1Q8TBF4 217 aaKnown RBP25.42■■□□□ 1.66
LINC01558-202ENST00000495520 HOXB7P09629 217 aa25.42■■□□□ 1.66
LINC01558-202ENST00000495520 THRAP3Q9Y2W1 955 aaKnown RBP25.42■■□□□ 1.66
LINC01558-202ENST00000495520 DISP2A7MBM2 1401 aa25.41■■□□□ 1.66
LINC01558-202ENST00000495520 WNK3Q9BYP7 1800 aa25.41■■□□□ 1.66
LINC01558-202ENST00000495520 TEFQ10587 303 aa25.41■■□□□ 1.66
LINC01558-202ENST00000495520 CCDC30Q5VVM6 783 aa25.41■■□□□ 1.66
LINC01558-202ENST00000495520 PHKG2P15735 406 aa25.39■■□□□ 1.66
LINC01558-202ENST00000495520 IFNL2Q8IZJ0 200 aa25.39■■□□□ 1.66
LINC01558-202ENST00000495520 PCDH11XQ9BZA7 1347 aa25.39■■□□□ 1.65
LINC01558-202ENST00000495520 PCDH11YQ9BZA8 1340 aa25.39■■□□□ 1.65
LINC01558-202ENST00000495520 CYP27B1O15528 508 aa25.39■■□□□ 1.65
LINC01558-202ENST00000495520 BTBD11A6QL63 1104 aa25.38■■□□□ 1.65
LINC01558-202ENST00000495520 SIPA1L3O60292 1781 aaPredicted RBP25.38■■□□□ 1.65
LINC01558-202ENST00000495520 HEG1Q9ULI3 1381 aa25.37■■□□□ 1.65
LINC01558-202ENST00000495520 DDX54Q8TDD1 881 aaKnown RBP25.37■■□□□ 1.65
LINC01558-202ENST00000495520 STK31Q9BXU1 1019 aa25.37■■□□□ 1.65
LINC01558-202ENST00000495520 CHMP4AQ9BY43 222 aa25.37■■□□□ 1.65
LINC01558-202ENST00000495520 VIRMAQ69YN4 1812 aaKnown RBP25.37■■□□□ 1.65
LINC01558-202ENST00000495520 CACNA1FO60840 1977 aa25.37■■□□□ 1.65
LINC01558-202ENST00000495520 G2E3Q7L622 706 aa25.36■■□□□ 1.65
LINC01558-202ENST00000495520 CDCA7Q9BWT1 371 aaPredicted RBP25.36■■□□□ 1.65
LINC01558-202ENST00000495520 SHANK3Q9BYB0 1731 aa25.36■■□□□ 1.65
LINC01558-202ENST00000495520 BARGINQ6ZT62 677 aa25.36■■□□□ 1.65
LINC01558-202ENST00000495520 KDM6AO15550 1401 aaPredicted RBP25.35■■□□□ 1.65
LINC01558-202ENST00000495520 PDE4AP27815 886 aa25.35■■□□□ 1.65
LINC01558-202ENST00000495520 FAM98CQ17RN3 349 aaKnown RBP25.35■■□□□ 1.65
LINC01558-202ENST00000495520 BACH2Q9BYV9 841 aa25.35■■□□□ 1.65
LINC01558-202ENST00000495520 KCNQ3O43525 872 aa25.34■■□□□ 1.65
LINC01558-202ENST00000495520 SMC5Q8IY18 1101 aa25.34■■□□□ 1.65
LINC01558-202ENST00000495520 EXOC5O00471 708 aa25.33■■□□□ 1.65
LINC01558-202ENST00000495520 TRPC5Q9UL62 973 aaPredicted RBP25.33■■□□□ 1.65
LINC01558-202ENST00000495520 SCN11AQ9UI33 1791 aa25.33■■□□□ 1.64
LINC01558-202ENST00000495520 ATRNO75882 1429 aa25.32■■□□□ 1.64
LINC01558-202ENST00000495520 HSP90AB1P08238 724 aaKnown RBP25.32■■□□□ 1.64
LINC01558-202ENST00000495520 GJD4Q96KN9 370 aaPredicted RBP25.32■■□□□ 1.64
LINC01558-202ENST00000495520 PDZRN3Q9UPQ7 1066 aa25.32■■□□□ 1.64
LINC01558-202ENST00000495520 DDB1Q16531 1140 aa25.31■■□□□ 1.64
LINC01558-202ENST00000495520 HDGFL1Q5TGJ6 251 aa25.31■■□□□ 1.64
LINC01558-202ENST00000495520 DCAF5Q96JK2 942 aa25.31■■□□□ 1.64
LINC01558-202ENST00000495520 TNS2Q63HR2 1409 aa25.31■■□□□ 1.64
LINC01558-202ENST00000495520 MRC1P22897 1456 aa25.31■■□□□ 1.64
LINC01558-202ENST00000495520 A0A0G2JS52 829 aa25.3■■□□□ 1.64
LINC01558-202ENST00000495520 MYT1Q01538 1121 aa25.3■■□□□ 1.64
LINC01558-202ENST00000495520 FLIIQ13045 1269 aa25.3■■□□□ 1.64
LINC01558-202ENST00000495520 SLC52A2Q9HAB3 445 aa25.3■■□□□ 1.64
LINC01558-202ENST00000495520 GLI3P10071 1580 aa25.3■■□□□ 1.64
LINC01558-202ENST00000495520 QTRT2Q9H974 415 aaKnown RBP25.29■■□□□ 1.64
LINC01558-202ENST00000495520 CCT4P50991 539 aaKnown RBP25.29■■□□□ 1.64
LINC01558-202ENST00000495520 GIGYF1O75420 1035 aaPredicted RBP25.28■■□□□ 1.64
LINC01558-202ENST00000495520 RGS3P49796 1198 aa25.27■■□□□ 1.64
LINC01558-202ENST00000495520 SIRT2Q8IXJ6 389 aa25.26■■□□□ 1.63
LINC01558-202ENST00000495520 NKX1-1Q15270 411 aaPredicted RBP25.26■■□□□ 1.63
LINC01558-202ENST00000495520 ZNF772Q68DY9 489 aaPredicted RBP25.25■■□□□ 1.63
LINC01558-202ENST00000495520 NECTIN2Q92692 538 aa25.24■■□□□ 1.63
LINC01558-202ENST00000495520 PXDNLA1KZ92 1463 aa25.24■■□□□ 1.63
LINC01558-202ENST00000495520 F6X3S4 739 aa25.23■■□□□ 1.63
LINC01558-202ENST00000495520 FAM161AQ3B820 660 aa25.23■■□□□ 1.63
LINC01558-202ENST00000495520 ZNF790Q6PG37 636 aa25.23■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms