RNA–Protein interactions for RNA: ENST00000495010.5

VARS-228, Transcript of valyl-tRNA synthetase, humanhuman

TSL 5

Gene VARS, Length 1,007 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-228ENST00000495010 POLKQ9UBT6 870 aa19.68■□□□□ 0.74
VARS-228ENST00000495010 RTCBQ9Y3I0 505 aaKnown RBP19.68■□□□□ 0.74
VARS-228ENST00000495010 RBM42Q9BTD8 480 aaKnown RBP19.67■□□□□ 0.74
VARS-228ENST00000495010 TNNT2P45379 298 aaPredicted RBP19.66■□□□□ 0.74
VARS-228ENST00000495010 NLGN1Q8N2Q7 840 aa19.66■□□□□ 0.74
VARS-228ENST00000495010 ANKRD26Q9UPS8 1709 aa19.65■□□□□ 0.74
VARS-228ENST00000495010 HSP90AB1P08238 724 aaKnown RBP19.65■□□□□ 0.74
VARS-228ENST00000495010 TGFB2P61812 414 aa19.65■□□□□ 0.74
VARS-228ENST00000495010 BCS1LQ9Y276 419 aa19.65■□□□□ 0.74
VARS-228ENST00000495010 EIF4A2Q14240 407 aaKnown RBP19.64■□□□□ 0.73
VARS-228ENST00000495010 ERVV-2B6SEH9 535 aa19.63■□□□□ 0.73
VARS-228ENST00000495010 RFC4P35249 363 aa19.63■□□□□ 0.73
VARS-228ENST00000495010 CCDC87Q9NVE4 849 aa19.63■□□□□ 0.73
VARS-228ENST00000495010 A0A0G2JLW4 131 aa19.62■□□□□ 0.73
VARS-228ENST00000495010 KIF3CO14782 793 aa19.62■□□□□ 0.73
VARS-228ENST00000495010 ADRA2BP18089 450 aa19.62■□□□□ 0.73
VARS-228ENST00000495010 PLEKHO1Q53GL0 409 aaPredicted RBP19.62■□□□□ 0.73
VARS-228ENST00000495010 ARHGAP27Q6ZUM4 889 aa19.62■□□□□ 0.73
VARS-228ENST00000495010 DCAF5Q96JK2 942 aa19.62■□□□□ 0.73
VARS-228ENST00000495010 PXDNLA1KZ92 1463 aa19.61■□□□□ 0.73
VARS-228ENST00000495010 PLEKHG2Q9H7P9 1386 aa19.61■□□□□ 0.73
VARS-228ENST00000495010 RC3H1Q5TC82 1133 aaKnown RBP19.61■□□□□ 0.73
VARS-228ENST00000495010 ARHGEF1Q92888 912 aaKnown RBP19.61■□□□□ 0.73
VARS-228ENST00000495010 PARP3Q9Y6F1 533 aa19.61■□□□□ 0.73
VARS-228ENST00000495010 CICQ96RK0 1608 aaPredicted RBP19.61■□□□□ 0.73
VARS-228ENST00000495010 CABP4P57796 275 aa19.6■□□□□ 0.73
VARS-228ENST00000495010 KDRP35968 1356 aa19.59■□□□□ 0.73
VARS-228ENST00000495010 FCHSD2O94868 740 aa19.59■□□□□ 0.73
VARS-228ENST00000495010 CNTNAP4Q9C0A0 1308 aa19.58■□□□□ 0.73
VARS-228ENST00000495010 N4BP2Q86UW6 1770 aaPredicted RBP19.58■□□□□ 0.73
VARS-228ENST00000495010 RPS6KA4O75676 772 aa19.58■□□□□ 0.72
VARS-228ENST00000495010 DPEP1P16444 411 aa19.58■□□□□ 0.72
VARS-228ENST00000495010 APLP1P51693 650 aa19.58■□□□□ 0.72
VARS-228ENST00000495010 AMOTQ4VCS5 1084 aa19.58■□□□□ 0.72
VARS-228ENST00000495010 ZNF530Q6P9A1 599 aaPredicted RBP19.58■□□□□ 0.72
VARS-228ENST00000495010 TIMELESSQ9UNS1 1208 aa19.58■□□□□ 0.72
VARS-228ENST00000495010 KIF13BQ9NQT8 1826 aa19.58■□□□□ 0.72
VARS-228ENST00000495010 TOMM70O94826 608 aa19.57■□□□□ 0.72
VARS-228ENST00000495010 GYS1P13807 737 aa19.57■□□□□ 0.72
VARS-228ENST00000495010 TRIM26Q12899 539 aaPredicted RBP19.57■□□□□ 0.72
VARS-228ENST00000495010 C1orf141Q5JVX7 400 aa19.57■□□□□ 0.72
VARS-228ENST00000495010 SLC4A9Q96Q91 983 aa19.57■□□□□ 0.72
VARS-228ENST00000495010 C10orf71Q711Q0 1435 aa19.57■□□□□ 0.72
VARS-228ENST00000495010 MTHFSP49914 203 aa19.56■□□□□ 0.72
VARS-228ENST00000495010 ZNF831Q5JPB2 1677 aa19.55■□□□□ 0.72
VARS-228ENST00000495010 CEP350Q5VT06 3117 aa19.54■□□□□ 0.72
VARS-228ENST00000495010 C4AP0C0L4 1744 aa19.54■□□□□ 0.72
VARS-228ENST00000495010 PTCD1O75127 700 aaKnown RBP19.54■□□□□ 0.72
VARS-228ENST00000495010 C16orf71Q8IYS4 520 aaPredicted RBP19.54■□□□□ 0.72
VARS-228ENST00000495010 PIM2Q9P1W9 311 aa19.53■□□□□ 0.72
VARS-228ENST00000495010 KIAA1551Q9HCM1 1747 aa19.53■□□□□ 0.72
VARS-228ENST00000495010 COL5A3P25940 1745 aaPredicted RBP19.52■□□□□ 0.72
VARS-228ENST00000495010 KDM6AO15550 1401 aaPredicted RBP19.51■□□□□ 0.71
VARS-228ENST00000495010 CRKLP46109 303 aaKnown RBP19.51■□□□□ 0.71
VARS-228ENST00000495010 C9orf131Q5VYM1 1079 aa19.51■□□□□ 0.71
VARS-228ENST00000495010 MORC1Q86VD1 984 aa19.51■□□□□ 0.71
VARS-228ENST00000495010 NFATC2IPQ8NCF5 419 aa19.51■□□□□ 0.71
VARS-228ENST00000495010 PANK3Q9H999 370 aa19.51■□□□□ 0.71
VARS-228ENST00000495010 NMRK2Q9NPI5 230 aa19.51■□□□□ 0.71
VARS-228ENST00000495010 DALRD3Q5D0E6 543 aaKnown RBP19.5■□□□□ 0.71
VARS-228ENST00000495010 SRP68Q9UHB9 627 aaKnown RBP19.49■□□□□ 0.71
VARS-228ENST00000495010 KCNA3P22001 575 aa19.48■□□□□ 0.71
VARS-228ENST00000495010 EIF4G2P78344 907 aaKnown RBP eCLIP19.48■□□□□ 0.71
VARS-228ENST00000495010 SULT6B1Q6IMI4 303 aa19.48■□□□□ 0.71
VARS-228ENST00000495010 AEBP1Q8IUX7 1158 aa19.48■□□□□ 0.71
VARS-228ENST00000495010 KDM2BQ8NHM5 1336 aa19.48■□□□□ 0.71
VARS-228ENST00000495010 USP42Q9H9J4 1324 aaKnown RBP19.48■□□□□ 0.71
VARS-228ENST00000495010 ZPR1O75312 459 aa19.47■□□□□ 0.71
VARS-228ENST00000495010 FKBP8Q14318 412 aa19.47■□□□□ 0.71
VARS-228ENST00000495010 RBM46Q8TBY0 533 aaKnown RBP19.47■□□□□ 0.71
VARS-228ENST00000495010 RNF181Q9P0P0 153 aa19.46■□□□□ 0.71
VARS-228ENST00000495010 MYH14Q7Z406 1995 aaKnown RBP19.46■□□□□ 0.71
VARS-228ENST00000495010 BRCA1P38398 1863 aaKnown RBP19.45■□□□□ 0.7
VARS-228ENST00000495010 ARFGEF1Q9Y6D6 1849 aa19.44■□□□□ 0.7
VARS-228ENST00000495010 CHRNA5P30532 468 aa19.44■□□□□ 0.7
VARS-228ENST00000495010 DDR1Q08345 913 aa19.44■□□□□ 0.7
VARS-228ENST00000495010 DNAJC5GQ8N7S2 189 aa19.44■□□□□ 0.7
VARS-228ENST00000495010 HSPA5P11021 654 aaKnown RBP19.43■□□□□ 0.7
VARS-228ENST00000495010 FSTL1Q12841 308 aa19.43■□□□□ 0.7
VARS-228ENST00000495010 PCGF6Q9BYE7 350 aa19.43■□□□□ 0.7
VARS-228ENST00000495010 KNSTRNQ9Y448 316 aa19.43■□□□□ 0.7
VARS-228ENST00000495010 CLSPNQ9HAW4 1339 aa19.43■□□□□ 0.7
VARS-228ENST00000495010 AKAP4Q5JQC9 854 aa19.42■□□□□ 0.7
VARS-228ENST00000495010 USPL1Q5W0Q7 1092 aa19.42■□□□□ 0.7
VARS-228ENST00000495010 INTS5Q6P9B9 1019 aaKnown RBP19.42■□□□□ 0.7
VARS-228ENST00000495010 RRAGCQ9HB90 399 aa19.42■□□□□ 0.7
VARS-228ENST00000495010 KCPQ6ZWJ8 1503 aa19.41■□□□□ 0.7
VARS-228ENST00000495010 POLRMTO00411 1230 aaKnown RBP19.41■□□□□ 0.7
VARS-228ENST00000495010 DNAJC10Q8IXB1 793 aa19.41■□□□□ 0.7
VARS-228ENST00000495010 TJP1Q07157 1748 aa19.4■□□□□ 0.7
VARS-228ENST00000495010 TM4SF1P30408 202 aa19.4■□□□□ 0.7
VARS-228ENST00000495010 IL13P35225 146 aa19.4■□□□□ 0.7
VARS-228ENST00000495010 SLC52A2Q9HAB3 445 aa19.4■□□□□ 0.7
VARS-228ENST00000495010 WDR90Q96KV7 1748 aa19.39■□□□□ 0.69
VARS-228ENST00000495010 KLRG1Q96E93 195 aa19.38■□□□□ 0.69
VARS-228ENST00000495010 SCN11AQ9UI33 1791 aa19.38■□□□□ 0.69
VARS-228ENST00000495010 SOS1Q07889 1333 aaPredicted RBP19.37■□□□□ 0.69
VARS-228ENST00000495010 HTRA3P83110 453 aa19.37■□□□□ 0.69
VARS-228ENST00000495010 LGR6Q9HBX8 967 aa19.37■□□□□ 0.69
VARS-228ENST00000495010 NARFQ9UHQ1 456 aa19.37■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 8.2 ms