RNA–Protein interactions for RNA: ENST00000494339.5

KPNA1-210, Transcript of karyopherin subunit alpha 1, humanhuman

TSL 2

Gene KPNA1, Length 1,923 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KPNA1-210ENST00000494339 FRAT1Q92837 279 aaPredicted RBP26.52■■□□□ 1.84
KPNA1-210ENST00000494339 THRAP3Q9Y2W1 955 aaKnown RBP26.52■■□□□ 1.84
KPNA1-210ENST00000494339 KDM3BQ7LBC6 1761 aa26.51■■□□□ 1.84
KPNA1-210ENST00000494339 C20orf194Q5TEA3 1177 aa26.51■■□□□ 1.83
KPNA1-210ENST00000494339 USP21Q9UK80 565 aa26.51■■□□□ 1.83
KPNA1-210ENST00000494339 CANXP27824 592 aaKnown RBP26.5■■□□□ 1.83
KPNA1-210ENST00000494339 ZNF428Q96B54 188 aa26.5■■□□□ 1.83
KPNA1-210ENST00000494339 SLC52A2Q9HAB3 445 aa26.5■■□□□ 1.83
KPNA1-210ENST00000494339 TCERG1O14776 1098 aaKnown RBP26.49■■□□□ 1.83
KPNA1-210ENST00000494339 ALDH1L2Q3SY69 923 aa26.49■■□□□ 1.83
KPNA1-210ENST00000494339 NFATC2IPQ8NCF5 419 aa26.49■■□□□ 1.83
KPNA1-210ENST00000494339 KCNQ3O43525 872 aa26.48■■□□□ 1.83
KPNA1-210ENST00000494339 VPS72Q15906 364 aa26.48■■□□□ 1.83
KPNA1-210ENST00000494339 CDCA7Q9BWT1 371 aaPredicted RBP26.47■■□□□ 1.83
KPNA1-210ENST00000494339 EXOC5O00471 708 aa26.47■■□□□ 1.83
KPNA1-210ENST00000494339 NKX1-1Q15270 411 aaPredicted RBP26.47■■□□□ 1.83
KPNA1-210ENST00000494339 MRC1P22897 1456 aa26.46■■□□□ 1.83
KPNA1-210ENST00000494339 TNKS1BP1Q9C0C2 1729 aaKnown RBP26.46■■□□□ 1.83
KPNA1-210ENST00000494339 CABP4P57796 275 aa26.45■■□□□ 1.83
KPNA1-210ENST00000494339 BARGINQ6ZT62 677 aa26.45■■□□□ 1.82
KPNA1-210ENST00000494339 PPP4R2Q9NY27 417 aa26.45■■□□□ 1.82
KPNA1-210ENST00000494339 AFF2P51816 1311 aa26.44■■□□□ 1.82
KPNA1-210ENST00000494339 TNS2Q63HR2 1409 aa26.44■■□□□ 1.82
KPNA1-210ENST00000494339 EIF4A1P60842 406 aaKnown RBP26.44■■□□□ 1.82
KPNA1-210ENST00000494339 SLC39A6Q13433 755 aa26.42■■□□□ 1.82
KPNA1-210ENST00000494339 DDB1Q16531 1140 aa26.42■■□□□ 1.82
KPNA1-210ENST00000494339 FAM98CQ17RN3 349 aaKnown RBP26.42■■□□□ 1.82
KPNA1-210ENST00000494339 EXOC6Q8TAG9 804 aa26.42■■□□□ 1.82
KPNA1-210ENST00000494339 NOB1Q9ULX3 412 aaKnown RBP26.42■■□□□ 1.82
KPNA1-210ENST00000494339 MRPL50Q8N5N7 158 aaKnown RBP26.41■■□□□ 1.82
KPNA1-210ENST00000494339 CRBNQ96SW2 442 aa26.41■■□□□ 1.82
KPNA1-210ENST00000494339 ZKSCAN2Q63HK3 967 aa26.41■■□□□ 1.82
KPNA1-210ENST00000494339 TNNQ9UQP3 1299 aa26.41■■□□□ 1.82
KPNA1-210ENST00000494339 TOGARAM1Q9Y4F4 1720 aa26.41■■□□□ 1.82
KPNA1-210ENST00000494339 KIF16BQ96L93 1317 aa26.41■■□□□ 1.82
KPNA1-210ENST00000494339 ERVV-2B6SEH9 535 aa26.4■■□□□ 1.82
KPNA1-210ENST00000494339 ZNF790Q6PG37 636 aa26.4■■□□□ 1.82
KPNA1-210ENST00000494339 KAT6BQ8WYB5 2073 aa26.39■■□□□ 1.82
KPNA1-210ENST00000494339 BRPF1P55201 1214 aaPredicted RBP26.39■■□□□ 1.81
KPNA1-210ENST00000494339 PELP1Q8IZL8 1130 aaKnown RBP26.39■■□□□ 1.81
KPNA1-210ENST00000494339 PANK1Q8TE04 598 aa26.39■■□□□ 1.81
KPNA1-210ENST00000494339 NECTIN2Q92692 538 aa26.38■■□□□ 1.81
KPNA1-210ENST00000494339 CLUAP1Q96AJ1 413 aa26.38■■□□□ 1.81
KPNA1-210ENST00000494339 PDE3AQ14432 1141 aa26.37■■□□□ 1.81
KPNA1-210ENST00000494339 SOS1Q07889 1333 aaPredicted RBP26.37■■□□□ 1.81
KPNA1-210ENST00000494339 TRIM27P14373 513 aa26.36■■□□□ 1.81
KPNA1-210ENST00000494339 ATF7IPQ6VMQ6 1270 aa26.36■■□□□ 1.81
KPNA1-210ENST00000494339 IPO8O15397 1037 aaKnown RBP26.35■■□□□ 1.81
KPNA1-210ENST00000494339 RLBP1P12271 317 aa26.35■■□□□ 1.81
KPNA1-210ENST00000494339 TTC5Q8N0Z6 440 aa26.35■■□□□ 1.81
KPNA1-210ENST00000494339 A0A0G2JS52 829 aa26.35■■□□□ 1.81
KPNA1-210ENST00000494339 MYT1Q01538 1121 aa26.35■■□□□ 1.81
KPNA1-210ENST00000494339 CCDC30Q5VVM6 783 aa26.34■■□□□ 1.81
KPNA1-210ENST00000494339 HEG1Q9ULI3 1381 aa26.34■■□□□ 1.81
KPNA1-210ENST00000494339 SLC4A2P04920 1241 aa26.33■■□□□ 1.81
KPNA1-210ENST00000494339 EIF2S2P20042 333 aaKnown RBP26.33■■□□□ 1.81
KPNA1-210ENST00000494339 HDGFL1Q5TGJ6 251 aa26.33■■□□□ 1.81
KPNA1-210ENST00000494339 FTSJ3Q8IY81 847 aaKnown RBP26.33■■□□□ 1.81
KPNA1-210ENST00000494339 ITGB4P16144 1822 aa26.33■■□□□ 1.81
KPNA1-210ENST00000494339 GIGYF1O75420 1035 aaPredicted RBP26.33■■□□□ 1.81
KPNA1-210ENST00000494339 HOXB7P09629 217 aa26.33■■□□□ 1.81
KPNA1-210ENST00000494339 MARCH10Q8NA82 808 aaPredicted RBP26.33■■□□□ 1.81
KPNA1-210ENST00000494339 GJD4Q96KN9 370 aaPredicted RBP26.33■■□□□ 1.81
KPNA1-210ENST00000494339 TMOD3Q9NYL9 352 aa26.33■■□□□ 1.81
KPNA1-210ENST00000494339 COG6Q9Y2V7 657 aa26.33■■□□□ 1.81
KPNA1-210ENST00000494339 DZIP1LQ8IYY4 767 aaKnown RBP26.32■■□□□ 1.8
KPNA1-210ENST00000494339 ZNF496Q96IT1 587 aaPredicted RBP26.32■■□□□ 1.8
KPNA1-210ENST00000494339 STK31Q9BXU1 1019 aa26.32■■□□□ 1.8
KPNA1-210ENST00000494339 TRPC5Q9UL62 973 aaPredicted RBP26.32■■□□□ 1.8
KPNA1-210ENST00000494339 GLI3P10071 1580 aa26.32■■□□□ 1.8
KPNA1-210ENST00000494339 PRAMEF22A3QJZ6 481 aa26.31■■□□□ 1.8
KPNA1-210ENST00000494339 ATRNO75882 1429 aa26.31■■□□□ 1.8
KPNA1-210ENST00000494339 DOT1LQ8TEK3 1739 aa26.29■■□□□ 1.8
KPNA1-210ENST00000494339 MS4A1P11836 297 aa26.29■■□□□ 1.8
KPNA1-210ENST00000494339 PIGBQ92521 554 aa26.29■■□□□ 1.8
KPNA1-210ENST00000494339 ARHGAP45Q92619 1136 aa26.29■■□□□ 1.8
KPNA1-210ENST00000494339 SYTL4Q96C24 671 aaPredicted RBP26.29■■□□□ 1.8
KPNA1-210ENST00000494339 CACNA1FO60840 1977 aa26.29■■□□□ 1.8
KPNA1-210ENST00000494339 FMNL2Q96PY5 1086 aa26.28■■□□□ 1.8
KPNA1-210ENST00000494339 PAPPAQ13219 1627 aa26.28■■□□□ 1.8
KPNA1-210ENST00000494339 C5P01031 1676 aa26.28■■□□□ 1.8
KPNA1-210ENST00000494339 B4GALNT3Q6L9W6 998 aa26.27■■□□□ 1.8
KPNA1-210ENST00000494339 QTRT2Q9H974 415 aaKnown RBP26.27■■□□□ 1.8
KPNA1-210ENST00000494339 THSD7AQ9UPZ6 1657 aa26.27■■□□□ 1.8
KPNA1-210ENST00000494339 G2E3Q7L622 706 aa26.27■■□□□ 1.8
KPNA1-210ENST00000494339 UBR2Q8IWV8 1755 aa26.26■■□□□ 1.79
KPNA1-210ENST00000494339 PRIM1P49642 420 aaKnown RBP26.26■■□□□ 1.79
KPNA1-210ENST00000494339 CHPF2Q9P2E5 772 aa26.26■■□□□ 1.79
KPNA1-210ENST00000494339 CHMP4AQ9BY43 222 aa26.25■■□□□ 1.79
KPNA1-210ENST00000494339 SNRPA1P09661 255 aaKnown RBP26.24■■□□□ 1.79
KPNA1-210ENST00000494339 TMEM57Q8N5G2 664 aa26.24■■□□□ 1.79
KPNA1-210ENST00000494339 ACSBG1Q96GR2 724 aa26.24■■□□□ 1.79
KPNA1-210ENST00000494339 API5Q9BZZ5 524 aaKnown RBP26.24■■□□□ 1.79
KPNA1-210ENST00000494339 BCL9O00512 1426 aa26.24■■□□□ 1.79
KPNA1-210ENST00000494339 PTCD1O75127 700 aaKnown RBP26.24■■□□□ 1.79
KPNA1-210ENST00000494339 MVPQ14764 893 aaKnown RBP26.24■■□□□ 1.79
KPNA1-210ENST00000494339 RGS17Q9UGC6 210 aaPredicted RBP26.24■■□□□ 1.79
KPNA1-210ENST00000494339 ASAP1Q9ULH1 1129 aa26.24■■□□□ 1.79
KPNA1-210ENST00000494339 PTPRCP08575 1304 aa26.23■■□□□ 1.79
KPNA1-210ENST00000494339 KCPQ6ZWJ8 1503 aa26.23■■□□□ 1.79
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms