RNA–Protein interactions for RNA: ENST00000494284.6

PHF3-205, Transcript of PHD finger protein 3, humanhuman

TSL 2

Gene PHF3, Length 2,854 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF3-205ENST00000494284 MCM4P33991 863 aa15.4■□□□□ 0.06
PHF3-205ENST00000494284 IP6K1Q92551 441 aa15.4■□□□□ 0.06
PHF3-205ENST00000494284 TAF7Q15545 349 aaPredicted RBP15.39■□□□□ 0.05
PHF3-205ENST00000494284 HDGFL1Q5TGJ6 251 aa15.39■□□□□ 0.05
PHF3-205ENST00000494284 PANK2Q9BZ23 570 aa15.39■□□□□ 0.05
PHF3-205ENST00000494284 LRRFIP2Q9Y608 721 aaKnown RBP15.39■□□□□ 0.05
PHF3-205ENST00000494284 ZNF530Q6P9A1 599 aaPredicted RBP15.39■□□□□ 0.05
PHF3-205ENST00000494284 CHPF2Q9P2E5 772 aa15.39■□□□□ 0.05
PHF3-205ENST00000494284 PIP4K2AP48426 406 aaPredicted RBP15.38■□□□□ 0.05
PHF3-205ENST00000494284 PXDNQ92626 1479 aa15.38■□□□□ 0.05
PHF3-205ENST00000494284 PTPRCP08575 1304 aa15.38■□□□□ 0.05
PHF3-205ENST00000494284 PROSER3Q2NL68 480 aa15.38■□□□□ 0.05
PHF3-205ENST00000494284 CHMP5Q9NZZ3 219 aa15.38■□□□□ 0.05
PHF3-205ENST00000494284 SDSP20132 328 aa15.38■□□□□ 0.05
PHF3-205ENST00000494284 CHRNA2Q15822 529 aa15.38■□□□□ 0.05
PHF3-205ENST00000494284 IL1RAPL2Q9NP60 686 aa15.38■□□□□ 0.05
PHF3-205ENST00000494284 ADGRL3Q9HAR2 1447 aa15.37■□□□□ 0.05
PHF3-205ENST00000494284 TTC22Q5TAA0 569 aa15.37■□□□□ 0.05
PHF3-205ENST00000494284 ANKRD24Q8TF21 1146 aa15.37■□□□□ 0.05
PHF3-205ENST00000494284 TRAK2O60296 914 aa15.36■□□□□ 0.05
PHF3-205ENST00000494284 MAP4K4O95819 1239 aaPredicted RBP15.36■□□□□ 0.05
PHF3-205ENST00000494284 KRT28Q7Z3Y7 464 aa15.36■□□□□ 0.05
PHF3-205ENST00000494284 NBPF7P0C2Y1 421 aaPredicted RBP15.36■□□□□ 0.05
PHF3-205ENST00000494284 SLC39A6Q13433 755 aa15.36■□□□□ 0.05
PHF3-205ENST00000494284 CCDC30Q5VVM6 783 aa15.36■□□□□ 0.05
PHF3-205ENST00000494284 NFAT5O94916 1531 aa15.35■□□□□ 0.05
PHF3-205ENST00000494284 USP44Q9H0E7 712 aa15.35■□□□□ 0.05
PHF3-205ENST00000494284 RPAP2Q8IXW5 612 aaPredicted RBP15.34■□□□□ 0.05
PHF3-205ENST00000494284 TNPO1Q92973 898 aaKnown RBP15.34■□□□□ 0.05
PHF3-205ENST00000494284 BTBD11A6QL63 1104 aa15.34■□□□□ 0.05
PHF3-205ENST00000494284 RBM25P49756 843 aaKnown RBP15.34■□□□□ 0.05
PHF3-205ENST00000494284 ARHGEF25Q86VW2 580 aa15.34■□□□□ 0.05
PHF3-205ENST00000494284 EIF4A1P60842 406 aaKnown RBP15.34■□□□□ 0.05
PHF3-205ENST00000494284 PI4KAP2A4QPH2 592 aa15.33■□□□□ 0.04
PHF3-205ENST00000494284 GNAI2P04899 355 aa15.33■□□□□ 0.04
PHF3-205ENST00000494284 FOXD4L5Q5VV16 416 aaPredicted RBP15.33■□□□□ 0.04
PHF3-205ENST00000494284 UNC5CLQ8IV45 518 aa15.33■□□□□ 0.04
PHF3-205ENST00000494284 PI4KAP1Q8N8J0 262 aa15.33■□□□□ 0.04
PHF3-205ENST00000494284 FOXD4L4Q8WXT5 416 aaPredicted RBP15.33■□□□□ 0.04
PHF3-205ENST00000494284 CHMP4BQ9H444 224 aaKnown RBP15.33■□□□□ 0.04
PHF3-205ENST00000494284 CDC45O75419 566 aa15.33■□□□□ 0.04
PHF3-205ENST00000494284 TEFQ10587 303 aa15.33■□□□□ 0.04
PHF3-205ENST00000494284 NOL8Q76FK4 1167 aaKnown RBP15.33■□□□□ 0.04
PHF3-205ENST00000494284 NUTM1Q86Y26 1132 aa15.33■□□□□ 0.04
PHF3-205ENST00000494284 CHAMP1Q96JM3 812 aa15.33■□□□□ 0.04
PHF3-205ENST00000494284 AIMP1Q12904 312 aaKnown RBP15.32■□□□□ 0.04
PHF3-205ENST00000494284 RGPD5Q99666 1765 aa15.32■□□□□ 0.04
PHF3-205ENST00000494284 USP54Q70EL1 1684 aa15.32■□□□□ 0.04
PHF3-205ENST00000494284 JARID2Q92833 1246 aaPredicted RBP15.32■□□□□ 0.04
PHF3-205ENST00000494284 AK9Q5TCS8 1911 aa15.32■□□□□ 0.04
PHF3-205ENST00000494284 CCT4P50991 539 aaKnown RBP15.31■□□□□ 0.04
PHF3-205ENST00000494284 NLRP2Q9NX02 1062 aa15.31■□□□□ 0.04
PHF3-205ENST00000494284 DTNBO60941 627 aa15.31■□□□□ 0.04
PHF3-205ENST00000494284 XRCC6P12956 609 aaKnown RBP eCLIP15.31■□□□□ 0.047e-13■■■■■ 31.2
PHF3-205ENST00000494284 SSFA2P28290 1259 aa15.31■□□□□ 0.04
PHF3-205ENST00000494284 IL25Q9H293 177 aa15.31■□□□□ 0.04
PHF3-205ENST00000494284 FAM208AQ9UK61 1670 aaKnown RBP15.31■□□□□ 0.04
PHF3-205ENST00000494284 CWF19L2Q2TBE0 894 aaKnown RBP15.3■□□□□ 0.04
PHF3-205ENST00000494284 GOLGA6L3A6NEY3 463 aa15.3■□□□□ 0.04
PHF3-205ENST00000494284 EIF5BO60841 1220 aaKnown RBP15.3■□□□□ 0.04
PHF3-205ENST00000494284 PDE1AP54750 535 aa15.3■□□□□ 0.04
PHF3-205ENST00000494284 LRRC37A3O60309 1634 aa15.3■□□□□ 0.04
PHF3-205ENST00000494284 PKP1Q13835 747 aa15.3■□□□□ 0.04
PHF3-205ENST00000494284 RILPL2Q969X0 211 aa15.3■□□□□ 0.04
PHF3-205ENST00000494284 HAP1P54257 671 aaPredicted RBP15.29■□□□□ 0.04
PHF3-205ENST00000494284 CEMIPQ8WUJ3 1361 aa15.29■□□□□ 0.04
PHF3-205ENST00000494284 PPP1R42Q7Z4L9 355 aa15.29■□□□□ 0.04
PHF3-205ENST00000494284 KCNH5Q8NCM2 988 aa15.29■□□□□ 0.04
PHF3-205ENST00000494284 K7ELQ4 463 aaPredicted RBP15.28■□□□□ 0.04
PHF3-205ENST00000494284 RNMTO43148 476 aaKnown RBP15.28■□□□□ 0.04
PHF3-205ENST00000494284 HTATSF1O43719 755 aaKnown RBP15.28■□□□□ 0.04
PHF3-205ENST00000494284 UBTFL1P0CB47 393 aaPredicted RBP15.28■□□□□ 0.04
PHF3-205ENST00000494284 KIF24Q5T7B8 1368 aa15.28■□□□□ 0.04
PHF3-205ENST00000494284 TRIM6-TRIM34B2RNG4 842 aa15.28■□□□□ 0.04
PHF3-205ENST00000494284 TPRNQ4KMQ1 711 aa15.28■□□□□ 0.04
PHF3-205ENST00000494284 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP15.28■□□□□ 0.04
PHF3-205ENST00000494284 C1orf141Q5JVX7 400 aa15.27■□□□□ 0.04
PHF3-205ENST00000494284 SOS1Q07889 1333 aaPredicted RBP15.27■□□□□ 0.04
PHF3-205ENST00000494284 TMEM94Q12767 1356 aa15.27■□□□□ 0.04
PHF3-205ENST00000494284 MYL6BP14649 208 aa15.27■□□□□ 0.03
PHF3-205ENST00000494284 USP26Q9BXU7 913 aa15.27■□□□□ 0.03
PHF3-205ENST00000494284 PA2G4Q9UQ80 394 aaKnown RBP15.27■□□□□ 0.03
PHF3-205ENST00000494284 SURF6O75683 361 aaKnown RBP15.26■□□□□ 0.03
PHF3-205ENST00000494284 SRGAP3O43295 1099 aa15.26■□□□□ 0.03
PHF3-205ENST00000494284 NCLP19338 710 aaKnown RBP15.26■□□□□ 0.03
PHF3-205ENST00000494284 FOXD4L6Q3SYB3 417 aaPredicted RBP15.26■□□□□ 0.03
PHF3-205ENST00000494284 PLEKHO1Q53GL0 409 aaPredicted RBP15.26■□□□□ 0.03
PHF3-205ENST00000494284 AKAP4Q5JQC9 854 aa15.26■□□□□ 0.03
PHF3-205ENST00000494284 FOXD4L3Q6VB84 417 aaPredicted RBP15.26■□□□□ 0.03
PHF3-205ENST00000494284 LRRCC1Q9C099 1032 aa15.26■□□□□ 0.03
PHF3-205ENST00000494284 C1orf167Q5SNV9 1468 aa15.26■□□□□ 0.03
PHF3-205ENST00000494284 HMMRO75330 724 aa15.26■□□□□ 0.03
PHF3-205ENST00000494284 CSB-PGBD3P0DP91 1061 aa15.26■□□□□ 0.03
PHF3-205ENST00000494284 ATP8B2P98198 1209 aa15.26■□□□□ 0.03
PHF3-205ENST00000494284 NFATC2IPQ8NCF5 419 aa15.26■□□□□ 0.03
PHF3-205ENST00000494284 ZGPATQ8N5A5 531 aaKnown RBP15.25■□□□□ 0.03
PHF3-205ENST00000494284 SRCIN1Q9C0H9 1055 aa15.25■□□□□ 0.03
PHF3-205ENST00000494284 C19orf44Q9H6X5 657 aa15.25■□□□□ 0.03
PHF3-205ENST00000494284 MAP3K2Q9Y2U5 619 aa15.25■□□□□ 0.03
PHF3-205ENST00000494284 ADCY9O60503 1353 aa15.25■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms