RNA–Protein interactions for RNA: ENST00000494195.1

HMGB3P14-201, Transcript of high mobility group box 3 pseudogene 14, humanhuman

BASIC

Gene HMGB3P14, Length 599 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P14-201ENST00000494195 USP17L18D6R9N7 530 aa14.06□□□□□ -0.16
HMGB3P14-201ENST00000494195 USP17L22D6RA61 530 aa14.06□□□□□ -0.16
HMGB3P14-201ENST00000494195 USP17L17D6RBQ6 530 aa14.06□□□□□ -0.16
HMGB3P14-201ENST00000494195 USP17L19D6RCP7 530 aa14.06□□□□□ -0.16
HMGB3P14-201ENST00000494195 USP17L20D6RJB6 530 aa14.06□□□□□ -0.16
HMGB3P14-201ENST00000494195 SNRPBP14678 240 aaKnown RBP14.06□□□□□ -0.16
HMGB3P14-201ENST00000494195 USP17L24Q0WX57 530 aa14.06□□□□□ -0.16
HMGB3P14-201ENST00000494195 PTK7Q13308 1070 aa14.06□□□□□ -0.16
HMGB3P14-201ENST00000494195 RNF217Q8TC41 542 aa14.06□□□□□ -0.16
HMGB3P14-201ENST00000494195 ARID3AQ99856 593 aa14.06□□□□□ -0.16
HMGB3P14-201ENST00000494195 MAN1A2O60476 641 aa14.05□□□□□ -0.16
HMGB3P14-201ENST00000494195 DNMT3LQ9UJW3 386 aa14.05□□□□□ -0.16
HMGB3P14-201ENST00000494195 RBM19Q9Y4C8 960 aaKnown RBP14.05□□□□□ -0.16
HMGB3P14-201ENST00000494195 CENPCQ03188 943 aa14.04□□□□□ -0.16
HMGB3P14-201ENST00000494195 ZNF787Q6DD87 383 aa14.04□□□□□ -0.16
HMGB3P14-201ENST00000494195 SERBP1Q8NC51 408 aaKnown RBP eCLIP14.04□□□□□ -0.16
HMGB3P14-201ENST00000494195 ZNF358Q9NW07 568 aa14.04□□□□□ -0.16
HMGB3P14-201ENST00000494195 FIGNL2A6NMB9 653 aa14.03□□□□□ -0.16
HMGB3P14-201ENST00000494195 BACH1O14867 736 aa14.03□□□□□ -0.16
HMGB3P14-201ENST00000494195 DKK1O94907 266 aa14.03□□□□□ -0.16
HMGB3P14-201ENST00000494195 SLC27A3Q5K4L6 730 aa14.03□□□□□ -0.16
HMGB3P14-201ENST00000494195 SLC4A9Q96Q91 983 aa14.03□□□□□ -0.16
HMGB3P14-201ENST00000494195 SERTAD1Q9UHV2 236 aa14.03□□□□□ -0.16
HMGB3P14-201ENST00000494195 TLR1Q15399 786 aa14.02□□□□□ -0.17
HMGB3P14-201ENST00000494195 ZNF800Q2TB10 664 aaPredicted RBP eCLIP14.02□□□□□ -0.17
HMGB3P14-201ENST00000494195 ANKMY2Q8IV38 441 aa14.02□□□□□ -0.17
HMGB3P14-201ENST00000494195 GRIP2Q9C0E4 1043 aa14.02□□□□□ -0.17
HMGB3P14-201ENST00000494195 SOBPA7XYQ1 873 aa14.01□□□□□ -0.17
HMGB3P14-201ENST00000494195 PPP1R15AO75807 674 aaPredicted RBP14.01□□□□□ -0.17
HMGB3P14-201ENST00000494195 FHDC1Q9C0D6 1143 aaPredicted RBP14.01□□□□□ -0.17
HMGB3P14-201ENST00000494195 M0R2N6 131 aa14□□□□□ -0.17
HMGB3P14-201ENST00000494195 ATG7O95352 703 aa14□□□□□ -0.17
HMGB3P14-201ENST00000494195 SMTNP53814 917 aa14□□□□□ -0.17
HMGB3P14-201ENST00000494195 LYSMD3Q7Z3D4 306 aa14□□□□□ -0.17
HMGB3P14-201ENST00000494195 ZSCAN10Q96SZ4 725 aaPredicted RBP14□□□□□ -0.17
HMGB3P14-201ENST00000494195 SEC13P55735 322 aa13.99□□□□□ -0.17
HMGB3P14-201ENST00000494195 DPYDQ12882 1025 aa13.99□□□□□ -0.17
HMGB3P14-201ENST00000494195 SFI1A8K8P3 1242 aa13.98□□□□□ -0.17
HMGB3P14-201ENST00000494195 ELOAQ14241 798 aaKnown RBP13.98□□□□□ -0.17
HMGB3P14-201ENST00000494195 ARXQ96QS3 562 aa13.98□□□□□ -0.17
HMGB3P14-201ENST00000494195 NOVA2Q9UNW9 492 aaKnown RBP13.98□□□□□ -0.17
HMGB3P14-201ENST00000494195 A6NJY4 79 aa13.97□□□□□ -0.17
HMGB3P14-201ENST00000494195 MTFR1Q15390 333 aa13.97□□□□□ -0.17
HMGB3P14-201ENST00000494195 PRICKLE2Q7Z3G6 844 aa13.97□□□□□ -0.17
HMGB3P14-201ENST00000494195 SPATA31C2B4DYI2 1134 aa13.96□□□□□ -0.17
HMGB3P14-201ENST00000494195 GTF2E1P29083 439 aaPredicted RBP13.96□□□□□ -0.17
HMGB3P14-201ENST00000494195 TMEM214Q6NUQ4 689 aaKnown RBP13.95□□□□□ -0.18
HMGB3P14-201ENST00000494195 PPARGC1BQ86YN6 1023 aaKnown RBP13.95□□□□□ -0.18
HMGB3P14-201ENST00000494195 FAM200AQ8TCP9 573 aa13.95□□□□□ -0.18
HMGB3P14-201ENST00000494195 EPHA4P54764 986 aa13.94□□□□□ -0.18
HMGB3P14-201ENST00000494195 ZMIZ1Q9ULJ6 1067 aa13.94□□□□□ -0.18
HMGB3P14-201ENST00000494195 CDK2AP1O14519 115 aa13.93□□□□□ -0.18
HMGB3P14-201ENST00000494195 GNASQ5JWF2 1037 aa13.93□□□□□ -0.18
HMGB3P14-201ENST00000494195 TNS4Q8IZW8 715 aa13.93□□□□□ -0.18
HMGB3P14-201ENST00000494195 TSEN2Q8NCE0 465 aaKnown RBP13.93□□□□□ -0.18
HMGB3P14-201ENST00000494195 RHBDD1Q8TEB9 315 aa13.93□□□□□ -0.18
HMGB3P14-201ENST00000494195 POU4F2Q12837 409 aa13.92□□□□□ -0.18
HMGB3P14-201ENST00000494195 TAS1R3Q7RTX0 852 aa13.92□□□□□ -0.18
HMGB3P14-201ENST00000494195 NBPF15Q8N660 670 aa13.92□□□□□ -0.18
HMGB3P14-201ENST00000494195 SCHIP1Q9P0W5 487 aaPredicted RBP13.92□□□□□ -0.18
HMGB3P14-201ENST00000494195 RHOQP17081 205 aa13.91□□□□□ -0.18
HMGB3P14-201ENST00000494195 WDR44Q5JSH3 913 aa13.91□□□□□ -0.18
HMGB3P14-201ENST00000494195 NBPF10Q6P3W6 841 aaKnown RBP13.91□□□□□ -0.18
HMGB3P14-201ENST00000494195 IQSEC3Q9UPP2 1182 aaPredicted RBP13.91□□□□□ -0.18
HMGB3P14-201ENST00000494195 ACIN1Q9UKV3 1341 aaKnown RBP13.9□□□□□ -0.18
HMGB3P14-201ENST00000494195 FOXK2Q01167 660 aa13.9□□□□□ -0.18
HMGB3P14-201ENST00000494195 PTSQ03393 145 aa13.9□□□□□ -0.18
HMGB3P14-201ENST00000494195 STK32AQ8WU08 396 aa13.89□□□□□ -0.19
HMGB3P14-201ENST00000494195 USP3Q9Y6I4 520 aa13.89□□□□□ -0.19
HMGB3P14-201ENST00000494195 C4orf17Q53FE4 359 aa13.88□□□□□ -0.19
HMGB3P14-201ENST00000494195 SLC9A9Q8IVB4 645 aa13.88□□□□□ -0.19
HMGB3P14-201ENST00000494195 HINFPQ9BQA5 517 aa13.88□□□□□ -0.19
HMGB3P14-201ENST00000494195 NIFKQ9BYG3 293 aaKnown RBP13.87□□□□□ -0.19
HMGB3P14-201ENST00000494195 SLC35F4A4IF30 521 aa13.86□□□□□ -0.19
HMGB3P14-201ENST00000494195 TMEM164Q5U3C3 297 aa13.86□□□□□ -0.19
HMGB3P14-201ENST00000494195 ZNF295-AS1Q8N0V1 137 aa13.86□□□□□ -0.19
HMGB3P14-201ENST00000494195 TSPAN10Q9H1Z9 355 aaPredicted RBP13.86□□□□□ -0.19
HMGB3P14-201ENST00000494195 SENP3-EIF4A1A0A087X0R7 540 aa13.85□□□□□ -0.19
HMGB3P14-201ENST00000494195 PHKA2P46019 1235 aa13.85□□□□□ -0.19
HMGB3P14-201ENST00000494195 SWI5Q1ZZU3 235 aa13.85□□□□□ -0.19
HMGB3P14-201ENST00000494195 TIMMDC1Q9NPL8 285 aa13.85□□□□□ -0.19
HMGB3P14-201ENST00000494195 CABP1Q9NZU7 370 aa13.84□□□□□ -0.19
HMGB3P14-201ENST00000494195 PLA2G4AP47712 749 aa13.83□□□□□ -0.2
HMGB3P14-201ENST00000494195 TBCELQ5QJ74 424 aa13.83□□□□□ -0.2
HMGB3P14-201ENST00000494195 CCDC155Q8N6L0 562 aa13.83□□□□□ -0.2
HMGB3P14-201ENST00000494195 NXF1Q9UBU9 619 aaKnown RBP13.83□□□□□ -0.2
HMGB3P14-201ENST00000494195 DYRK1BQ9Y463 629 aa13.83□□□□□ -0.2
HMGB3P14-201ENST00000494195 CSB-PGBD3P0DP91 1061 aa13.82□□□□□ -0.2
HMGB3P14-201ENST00000494195 FAM69CQ0P6D2 419 aa13.82□□□□□ -0.2
HMGB3P14-201ENST00000494195 TEAD4Q15561 434 aa13.82□□□□□ -0.2
HMGB3P14-201ENST00000494195 GAS2L2Q8NHY3 880 aa13.82□□□□□ -0.2
HMGB3P14-201ENST00000494195 PSMA6P60900 246 aaKnown RBP13.81□□□□□ -0.2
HMGB3P14-201ENST00000494195 SCG3Q8WXD2 468 aaKnown RBP13.81□□□□□ -0.2
HMGB3P14-201ENST00000494195 ATAD2Q6PL18 1390 aa13.81□□□□□ -0.2
HMGB3P14-201ENST00000494195 A0A1B0GTH6 734 aa13.8□□□□□ -0.2
HMGB3P14-201ENST00000494195 C21orf2O43822 256 aa13.8□□□□□ -0.2
HMGB3P14-201ENST00000494195 LGR5O75473 907 aa13.8□□□□□ -0.2
HMGB3P14-201ENST00000494195 PPP1R12BO60237 982 aaPredicted RBP13.79□□□□□ -0.2
HMGB3P14-201ENST00000494195 PPFIA3O75145 1194 aa13.79□□□□□ -0.2
HMGB3P14-201ENST00000494195 IGFBP4P22692 258 aa13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms