RNA–Protein interactions for RNA: ENST00000493940.2

HSPG2-212, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 5

Gene HSPG2, Length 584 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-212ENST00000493940 SIK1P57059 783 aa17.11■□□□□ 0.33
HSPG2-212ENST00000493940 SMARCC1Q92922 1105 aaPredicted RBP17.11■□□□□ 0.33
HSPG2-212ENST00000493940 LGR6Q9HBX8 967 aa17.11■□□□□ 0.33
HSPG2-212ENST00000493940 ERVV-2B6SEH9 535 aa17.1■□□□□ 0.33
HSPG2-212ENST00000493940 AMOTQ4VCS5 1084 aa17.1■□□□□ 0.33
HSPG2-212ENST00000493940 ZNF784Q8NCA9 323 aaPredicted RBP17.1■□□□□ 0.33
HSPG2-212ENST00000493940 DCAF5Q96JK2 942 aa17.1■□□□□ 0.33
HSPG2-212ENST00000493940 ZNF831Q5JPB2 1677 aa17.1■□□□□ 0.33
HSPG2-212ENST00000493940 ADAMTS7Q9UKP4 1686 aa17.1■□□□□ 0.33
HSPG2-212ENST00000493940 MTHFSDQ2M296 383 aaKnown RBP17.09■□□□□ 0.33
HSPG2-212ENST00000493940 TJP1Q07157 1748 aa17.08■□□□□ 0.32
HSPG2-212ENST00000493940 NFATC2IPQ8NCF5 419 aa17.08■□□□□ 0.32
HSPG2-212ENST00000493940 SLC16A10Q8TF71 515 aa17.08■□□□□ 0.32
HSPG2-212ENST00000493940 ARXQ96QS3 562 aa17.08■□□□□ 0.32
HSPG2-212ENST00000493940 MSL1Q68DK7 614 aa17.07■□□□□ 0.32
HSPG2-212ENST00000493940 MSH5O43196 834 aa17.06■□□□□ 0.32
HSPG2-212ENST00000493940 PPP2R1AP30153 589 aa17.06■□□□□ 0.32
HSPG2-212ENST00000493940 ATP6V1AP38606 617 aa17.06■□□□□ 0.32
HSPG2-212ENST00000493940 CABP4P57796 275 aa17.06■□□□□ 0.32
HSPG2-212ENST00000493940 SIPA1L3O60292 1781 aaPredicted RBP17.06■□□□□ 0.32
HSPG2-212ENST00000493940 MAP3K5Q99683 1374 aa17.05■□□□□ 0.32
HSPG2-212ENST00000493940 HSP90AB1P08238 724 aaKnown RBP17.05■□□□□ 0.32
HSPG2-212ENST00000493940 AKAP4Q5JQC9 854 aa17.05■□□□□ 0.32
HSPG2-212ENST00000493940 C1orf141Q5JVX7 400 aa17.05■□□□□ 0.32
HSPG2-212ENST00000493940 RBM42Q9BTD8 480 aaKnown RBP17.05■□□□□ 0.32
HSPG2-212ENST00000493940 U2SURPO15042 1029 aaKnown RBP17.04■□□□□ 0.32
HSPG2-212ENST00000493940 PHF14O94880 888 aa17.04■□□□□ 0.32
HSPG2-212ENST00000493940 RNMTO43148 476 aaKnown RBP17.03■□□□□ 0.32
HSPG2-212ENST00000493940 PHACTR3Q96KR7 559 aa17.03■□□□□ 0.32
HSPG2-212ENST00000493940 C4AP0C0L4 1744 aa17.03■□□□□ 0.32
HSPG2-212ENST00000493940 CHD4Q14839 1912 aa17.03■□□□□ 0.32
HSPG2-212ENST00000493940 DLG5Q8TDM6 1919 aa17.02■□□□□ 0.32
HSPG2-212ENST00000493940 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.02■□□□□ 0.32
HSPG2-212ENST00000493940 PTCD1O75127 700 aaKnown RBP17.02■□□□□ 0.32
HSPG2-212ENST00000493940 AK7Q96M32 723 aa17.02■□□□□ 0.32
HSPG2-212ENST00000493940 UBR2Q8IWV8 1755 aa17.02■□□□□ 0.31
HSPG2-212ENST00000493940 MRC1P22897 1456 aa17.01■□□□□ 0.31
HSPG2-212ENST00000493940 CICQ96RK0 1608 aaPredicted RBP17.01■□□□□ 0.31
HSPG2-212ENST00000493940 SLC39A6Q13433 755 aa17.01■□□□□ 0.31
HSPG2-212ENST00000493940 NLGN2Q8NFZ4 835 aa17.01■□□□□ 0.31
HSPG2-212ENST00000493940 GNPATO15228 680 aa17■□□□□ 0.31
HSPG2-212ENST00000493940 IL17REQ8NFR9 667 aa17■□□□□ 0.31
HSPG2-212ENST00000493940 RSPH6AQ9H0K4 717 aa17■□□□□ 0.31
HSPG2-212ENST00000493940 SLC52A2Q9HAB3 445 aa17■□□□□ 0.31
HSPG2-212ENST00000493940 KCPQ6ZWJ8 1503 aa16.99■□□□□ 0.31
HSPG2-212ENST00000493940 POLD1P28340 1107 aa16.98■□□□□ 0.31
HSPG2-212ENST00000493940 KLHL34Q8N239 644 aa16.98■□□□□ 0.31
HSPG2-212ENST00000493940 SSFA2P28290 1259 aa16.97■□□□□ 0.31
HSPG2-212ENST00000493940 PRKAR2BP31323 418 aa16.97■□□□□ 0.31
HSPG2-212ENST00000493940 C1QTNF8P60827 252 aa16.97■□□□□ 0.31
HSPG2-212ENST00000493940 FLAD1Q8NFF5 587 aa16.97■□□□□ 0.31
HSPG2-212ENST00000493940 RC3H1Q5TC82 1133 aaKnown RBP16.96■□□□□ 0.31
HSPG2-212ENST00000493940 ARHGEF1Q92888 912 aaKnown RBP16.96■□□□□ 0.31
HSPG2-212ENST00000493940 DDX10Q13206 875 aaKnown RBP16.95■□□□□ 0.3
HSPG2-212ENST00000493940 GPR162Q16538 588 aa16.95■□□□□ 0.3
HSPG2-212ENST00000493940 INTS5Q6P9B9 1019 aaKnown RBP16.95■□□□□ 0.3
HSPG2-212ENST00000493940 DNAJC10Q8IXB1 793 aa16.95■□□□□ 0.3
HSPG2-212ENST00000493940 KIAA1551Q9HCM1 1747 aa16.95■□□□□ 0.3
HSPG2-212ENST00000493940 CNTNAP4Q9C0A0 1308 aa16.95■□□□□ 0.3
HSPG2-212ENST00000493940 N4BP2Q86UW6 1770 aaPredicted RBP16.94■□□□□ 0.3
HSPG2-212ENST00000493940 KIF13BQ9NQT8 1826 aa16.94■□□□□ 0.3
HSPG2-212ENST00000493940 RPS6KA4O75676 772 aa16.94■□□□□ 0.3
HSPG2-212ENST00000493940 CRKLP46109 303 aaKnown RBP16.94■□□□□ 0.3
HSPG2-212ENST00000493940 U2AF1L5P0DN76 240 aaPredicted RBP16.93■□□□□ 0.3
HSPG2-212ENST00000493940 U2AF1Q01081 240 aaKnown RBP eCLIP16.93■□□□□ 0.3
HSPG2-212ENST00000493940 CFAP53Q96M91 514 aa16.93■□□□□ 0.3
HSPG2-212ENST00000493940 GNAT3A8MTJ3 354 aa16.92■□□□□ 0.3
HSPG2-212ENST00000493940 KCNQ3O43525 872 aa16.92■□□□□ 0.3
HSPG2-212ENST00000493940 TRAPPC3LQ5T215 181 aa16.92■□□□□ 0.3
HSPG2-212ENST00000493940 RTCBQ9Y3I0 505 aaKnown RBP16.92■□□□□ 0.3
HSPG2-212ENST00000493940 SENP3-EIF4A1A0A087X0R7 540 aa16.91■□□□□ 0.3
HSPG2-212ENST00000493940 CYP19A1P11511 503 aaPredicted RBP16.91■□□□□ 0.3
HSPG2-212ENST00000493940 GYS1P13807 737 aa16.91■□□□□ 0.3
HSPG2-212ENST00000493940 YBX3P16989 372 aaKnown RBP eCLIP16.91■□□□□ 0.3
HSPG2-212ENST00000493940 SRP68Q9UHB9 627 aaKnown RBP16.91■□□□□ 0.3
HSPG2-212ENST00000493940 CEMIPQ8WUJ3 1361 aa16.9■□□□□ 0.3
HSPG2-212ENST00000493940 HMGB2P26583 209 aaKnown RBP16.9■□□□□ 0.3
HSPG2-212ENST00000493940 DCTN1Q14203 1278 aa16.9■□□□□ 0.3
HSPG2-212ENST00000493940 GAS2L2Q8NHY3 880 aa16.9■□□□□ 0.3
HSPG2-212ENST00000493940 AFDNP55196 1824 aaKnown RBP16.9■□□□□ 0.3
HSPG2-212ENST00000493940 FCHSD2O94868 740 aa16.89■□□□□ 0.29
HSPG2-212ENST00000493940 NUDCQ9Y266 331 aa16.89■□□□□ 0.29
HSPG2-212ENST00000493940 MMP10P09238 476 aa16.88■□□□□ 0.29
HSPG2-212ENST00000493940 MCM10Q7L590 875 aa16.88■□□□□ 0.29
HSPG2-212ENST00000493940 ZNF496Q96IT1 587 aaPredicted RBP16.88■□□□□ 0.29
HSPG2-212ENST00000493940 PLEKHF1Q96S99 279 aa16.88■□□□□ 0.29
HSPG2-212ENST00000493940 BRCA1P38398 1863 aaKnown RBP16.88■□□□□ 0.29
HSPG2-212ENST00000493940 WWC3Q9ULE0 1092 aa16.87■□□□□ 0.29
HSPG2-212ENST00000493940 ZBTB1Q9Y2K1 713 aa16.87■□□□□ 0.29
HSPG2-212ENST00000493940 CD2APQ9Y5K6 639 aa16.87■□□□□ 0.29
HSPG2-212ENST00000493940 GRIN3BO60391 1043 aa16.86■□□□□ 0.29
HSPG2-212ENST00000493940 GIGYF1O75420 1035 aaPredicted RBP16.86■□□□□ 0.29
HSPG2-212ENST00000493940 ADRA2BP18089 450 aa16.86■□□□□ 0.29
HSPG2-212ENST00000493940 RFC4P35249 363 aa16.86■□□□□ 0.29
HSPG2-212ENST00000493940 FKBP8Q14318 412 aa16.86■□□□□ 0.29
HSPG2-212ENST00000493940 ZNF790Q6PG37 636 aa16.86■□□□□ 0.29
HSPG2-212ENST00000493940 PELP1Q8IZL8 1130 aaKnown RBP16.86■□□□□ 0.29
HSPG2-212ENST00000493940 CCDC87Q9NVE4 849 aa16.86■□□□□ 0.29
HSPG2-212ENST00000493940 PRAMEF22A3QJZ6 481 aa16.85■□□□□ 0.29
HSPG2-212ENST00000493940 TEFQ10587 303 aa16.85■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms