RNA–Protein interactions for RNA: ENST00000493919.5

BRCA1-222, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 2

Gene BRCA1, Length 1,948 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-222ENST00000493919 TNS2Q63HR2 1409 aa14.82□□□□□ -0.04
BRCA1-222ENST00000493919 COL3A1P02461 1466 aaPredicted RBP14.81□□□□□ -0.04
BRCA1-222ENST00000493919 RAPGEF4Q8WZA2 1011 aa14.81□□□□□ -0.04
BRCA1-222ENST00000493919 CFAP53Q96M91 514 aa14.81□□□□□ -0.04
BRCA1-222ENST00000493919 IRX3P78415 501 aaPredicted RBP14.8□□□□□ -0.04
BRCA1-222ENST00000493919 RALBP1Q15311 655 aa14.8□□□□□ -0.04
BRCA1-222ENST00000493919 ZNF830Q96NB3 372 aaPredicted RBP14.8□□□□□ -0.04
BRCA1-222ENST00000493919 DIAPH1O60610 1272 aaKnown RBP14.8□□□□□ -0.04
BRCA1-222ENST00000493919 IGSF1Q8N6C5 1336 aa14.79□□□□□ -0.04
BRCA1-222ENST00000493919 CC2D2BQ6DHV5 1058 aa14.79□□□□□ -0.04
BRCA1-222ENST00000493919 RGPD1P0DJD0 1748 aa14.79□□□□□ -0.04
BRCA1-222ENST00000493919 EXOC5O00471 708 aa14.78□□□□□ -0.04
BRCA1-222ENST00000493919 IL13P35225 146 aa14.78□□□□□ -0.04
BRCA1-222ENST00000493919 TMEM51Q9NW97 253 aa14.78□□□□□ -0.04
BRCA1-222ENST00000493919 OVOS2A0A0G2JMS6 1433 aa14.78□□□□□ -0.04
BRCA1-222ENST00000493919 NCAPD2Q15021 1401 aa14.78□□□□□ -0.04
BRCA1-222ENST00000493919 U2SURPO15042 1029 aaKnown RBP14.78□□□□□ -0.04
BRCA1-222ENST00000493919 TATP17735 454 aaPredicted RBP14.78□□□□□ -0.04
BRCA1-222ENST00000493919 SMAP1Q8IYB5 467 aaPredicted RBP14.78□□□□□ -0.04
BRCA1-222ENST00000493919 PRKRIP1Q9H875 184 aaPredicted RBP14.78□□□□□ -0.04
BRCA1-222ENST00000493919 MYBBP1AQ9BQG0 1328 aaKnown RBP14.77□□□□□ -0.04
BRCA1-222ENST00000493919 AEBP1Q8IUX7 1158 aa14.77□□□□□ -0.04
BRCA1-222ENST00000493919 SHANK3Q9BYB0 1731 aa14.76□□□□□ -0.05
BRCA1-222ENST00000493919 HMOX1P09601 288 aa14.76□□□□□ -0.05
BRCA1-222ENST00000493919 SULT6B1Q6IMI4 303 aa14.76□□□□□ -0.05
BRCA1-222ENST00000493919 DDX54Q8TDD1 881 aaKnown RBP14.75□□□□□ -0.05
BRCA1-222ENST00000493919 PKD1L3Q7Z443 1732 aa14.75□□□□□ -0.05
BRCA1-222ENST00000493919 SOCS7O14512 581 aa14.74□□□□□ -0.05
BRCA1-222ENST00000493919 UTP14CQ5TAP6 766 aaKnown RBP14.74□□□□□ -0.05
BRCA1-222ENST00000493919 FAM43BQ6ZT52 329 aaPredicted RBP14.74□□□□□ -0.05
BRCA1-222ENST00000493919 ZCRB1Q8TBF4 217 aaKnown RBP14.74□□□□□ -0.05
BRCA1-222ENST00000493919 PATL2C9JE40 543 aaKnown RBP14.74□□□□□ -0.05
BRCA1-222ENST00000493919 ANP32CO43423 234 aa14.74□□□□□ -0.05
BRCA1-222ENST00000493919 MARCH10Q8NA82 808 aaPredicted RBP14.74□□□□□ -0.05
BRCA1-222ENST00000493919 FKBP8Q14318 412 aa14.73□□□□□ -0.05
BRCA1-222ENST00000493919 NUDCQ9Y266 331 aa14.73□□□□□ -0.05
BRCA1-222ENST00000493919 KDRP35968 1356 aa14.73□□□□□ -0.05
BRCA1-222ENST00000493919 DNAJC2Q99543 621 aaKnown RBP14.72□□□□□ -0.05
BRCA1-222ENST00000493919 PCDH11XQ9BZA7 1347 aa14.72□□□□□ -0.05
BRCA1-222ENST00000493919 PCDH11YQ9BZA8 1340 aa14.72□□□□□ -0.05
BRCA1-222ENST00000493919 FAM196AQ6ZSG2 479 aa14.72□□□□□ -0.05
BRCA1-222ENST00000493919 CERS3Q8IU89 383 aa14.72□□□□□ -0.05
BRCA1-222ENST00000493919 HDAC5Q9UQL6 1122 aa14.72□□□□□ -0.05
BRCA1-222ENST00000493919 U2AF1L5P0DN76 240 aaPredicted RBP14.71□□□□□ -0.05
BRCA1-222ENST00000493919 ANP32AP39687 249 aaKnown RBP14.71□□□□□ -0.05
BRCA1-222ENST00000493919 U2AF1Q01081 240 aaKnown RBP eCLIP14.71□□□□□ -0.05
BRCA1-222ENST00000493919 UPF1Q92900 1129 aaKnown RBP eCLIP14.71□□□□□ -0.05
BRCA1-222ENST00000493919 PLCD3Q8N3E9 789 aa14.7□□□□□ -0.06
BRCA1-222ENST00000493919 TRIM44Q96DX7 344 aaPredicted RBP14.7□□□□□ -0.06
BRCA1-222ENST00000493919 SPG7Q9UQ90 795 aa14.7□□□□□ -0.06
BRCA1-222ENST00000493919 DOT1LQ8TEK3 1739 aa14.7□□□□□ -0.06
BRCA1-222ENST00000493919 TRIM37O94972 964 aa14.7□□□□□ -0.06
BRCA1-222ENST00000493919 SBF2Q86WG5 1849 aa14.69□□□□□ -0.06
BRCA1-222ENST00000493919 TNS1Q9HBL0 1735 aaKnown RBP14.69□□□□□ -0.06
BRCA1-222ENST00000493919 ACSBG1Q96GR2 724 aa14.69□□□□□ -0.06
BRCA1-222ENST00000493919 SF3B2Q13435 895 aaKnown RBP14.68□□□□□ -0.06
BRCA1-222ENST00000493919 KAT6BQ8WYB5 2073 aa14.68□□□□□ -0.06
BRCA1-222ENST00000493919 CYP27B1O15528 508 aa14.68□□□□□ -0.06
BRCA1-222ENST00000493919 PRDM16Q9HAZ2 1276 aa14.68□□□□□ -0.06
BRCA1-222ENST00000493919 NHSQ6T4R5 1651 aa14.68□□□□□ -0.06
BRCA1-222ENST00000493919 PLEKHO1Q53GL0 409 aaPredicted RBP14.67□□□□□ -0.06
BRCA1-222ENST00000493919 TAF3Q5VWG9 929 aa14.67□□□□□ -0.06
BRCA1-222ENST00000493919 ZNF530Q6P9A1 599 aaPredicted RBP14.67□□□□□ -0.06
BRCA1-222ENST00000493919 PLEKHG2Q9H7P9 1386 aa14.67□□□□□ -0.06
BRCA1-222ENST00000493919 MAFGO15525 162 aa14.66□□□□□ -0.06
BRCA1-222ENST00000493919 PRKAR2BP31323 418 aa14.66□□□□□ -0.06
BRCA1-222ENST00000493919 CEP120Q8N960 986 aa14.66□□□□□ -0.06
BRCA1-222ENST00000493919 SYTL4Q96C24 671 aaPredicted RBP14.66□□□□□ -0.06
BRCA1-222ENST00000493919 MAP7D2Q96T17 732 aa14.66□□□□□ -0.06
BRCA1-222ENST00000493919 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.66□□□□□ -0.064e-6■■■■■ 27.4
BRCA1-222ENST00000493919 AMOTQ4VCS5 1084 aa14.66□□□□□ -0.06
BRCA1-222ENST00000493919 BCL9O00512 1426 aa14.66□□□□□ -0.06
BRCA1-222ENST00000493919 TOGARAM1Q9Y4F4 1720 aa14.65□□□□□ -0.06
BRCA1-222ENST00000493919 ANAPC15P60006 121 aa14.65□□□□□ -0.06
BRCA1-222ENST00000493919 GSE1Q14687 1217 aa14.65□□□□□ -0.06
BRCA1-222ENST00000493919 WDR43Q15061 677 aaKnown RBP eCLIP14.65□□□□□ -0.06
BRCA1-222ENST00000493919 C1orf141Q5JVX7 400 aa14.65□□□□□ -0.06
BRCA1-222ENST00000493919 IFNL2Q8IZJ0 200 aa14.65□□□□□ -0.06
BRCA1-222ENST00000493919 PHKG2P15735 406 aa14.64□□□□□ -0.07
BRCA1-222ENST00000493919 KCNQ2O43526 872 aa14.64□□□□□ -0.07
BRCA1-222ENST00000493919 APPP05067 770 aa14.64□□□□□ -0.07
BRCA1-222ENST00000493919 TPM2P07951 284 aa14.64□□□□□ -0.07
BRCA1-222ENST00000493919 PTF1AQ7RTS3 328 aa14.64□□□□□ -0.07
BRCA1-222ENST00000493919 DEFB132Q7Z7B7 95 aa14.63□□□□□ -0.07
BRCA1-222ENST00000493919 CCDC125Q86Z20 511 aa14.63□□□□□ -0.07
BRCA1-222ENST00000493919 GPATCH11Q8N954 259 aa14.63□□□□□ -0.07
BRCA1-222ENST00000493919 APBA3O96018 575 aa14.62□□□□□ -0.07
BRCA1-222ENST00000493919 BAG6P46379 1132 aa14.62□□□□□ -0.07
BRCA1-222ENST00000493919 PSEN1P49768 467 aa14.62□□□□□ -0.07
BRCA1-222ENST00000493919 MTHFSDQ2M296 383 aaKnown RBP14.62□□□□□ -0.07
BRCA1-222ENST00000493919 CCDC184Q52MB2 194 aa14.62□□□□□ -0.07
BRCA1-222ENST00000493919 MRS2Q9HD23 443 aa14.62□□□□□ -0.07
BRCA1-222ENST00000493919 BTAF1O14981 1849 aa14.62□□□□□ -0.07
BRCA1-222ENST00000493919 FCHSD2O94868 740 aa14.62□□□□□ -0.07
BRCA1-222ENST00000493919 PRIM1P49642 420 aaKnown RBP14.62□□□□□ -0.07
BRCA1-222ENST00000493919 MAPK8IP3Q9UPT6 1336 aa14.61□□□□□ -0.07
BRCA1-222ENST00000493919 EN1Q05925 392 aaPredicted RBP14.6□□□□□ -0.07
BRCA1-222ENST00000493919 PHACTR3Q96KR7 559 aa14.6□□□□□ -0.07
BRCA1-222ENST00000493919 IPO9Q96P70 1041 aaKnown RBP14.6□□□□□ -0.07
BRCA1-222ENST00000493919 KDM6AO15550 1401 aaPredicted RBP14.6□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 98.2 ms