RNA–Protein interactions for RNA: ENST00000493356.5

PFDN4-205, Transcript of prefoldin subunit 4, humanhuman

TSL 3

Gene PFDN4, Length 659 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN4-205ENST00000493356 PLEKHG2Q9H7P9 1386 aa29.67■■■□□ 2.34
PFDN4-205ENST00000493356 KIF13BQ9NQT8 1826 aa29.67■■■□□ 2.34
PFDN4-205ENST00000493356 CICQ96RK0 1608 aaPredicted RBP29.67■■■□□ 2.34
PFDN4-205ENST00000493356 MMP10P09238 476 aa29.66■■■□□ 2.34
PFDN4-205ENST00000493356 ZNF831Q5JPB2 1677 aa29.66■■■□□ 2.34
PFDN4-205ENST00000493356 KIAA1551Q9HCM1 1747 aa29.65■■■□□ 2.34
PFDN4-205ENST00000493356 TNNT2P45379 298 aaPredicted RBP29.64■■■□□ 2.34
PFDN4-205ENST00000493356 PXDNLA1KZ92 1463 aa29.63■■■□□ 2.33
PFDN4-205ENST00000493356 HSPA6P17066 643 aa29.63■■■□□ 2.33
PFDN4-205ENST00000493356 TRIM26Q12899 539 aaPredicted RBP29.62■■■□□ 2.33
PFDN4-205ENST00000493356 IFFO2Q5TF58 517 aa29.62■■■□□ 2.33
PFDN4-205ENST00000493356 SLC4A9Q96Q91 983 aa29.62■■■□□ 2.33
PFDN4-205ENST00000493356 RTCBQ9Y3I0 505 aaKnown RBP29.62■■■□□ 2.33
PFDN4-205ENST00000493356 COL5A3P25940 1745 aaPredicted RBP29.62■■■□□ 2.33
PFDN4-205ENST00000493356 N4BP2Q86UW6 1770 aaPredicted RBP29.62■■■□□ 2.33
PFDN4-205ENST00000493356 TRAPPC3LQ5T215 181 aa29.61■■■□□ 2.33
PFDN4-205ENST00000493356 TIMELESSQ9UNS1 1208 aa29.61■■■□□ 2.33
PFDN4-205ENST00000493356 ERVV-2B6SEH9 535 aa29.6■■■□□ 2.33
PFDN4-205ENST00000493356 POLR3GLQ9BT43 218 aa29.6■■■□□ 2.33
PFDN4-205ENST00000493356 C10orf71Q711Q0 1435 aa29.58■■■□□ 2.33
PFDN4-205ENST00000493356 NLGN1Q8N2Q7 840 aa29.58■■■□□ 2.33
PFDN4-205ENST00000493356 DCAF5Q96JK2 942 aa29.58■■■□□ 2.33
PFDN4-205ENST00000493356 RBM42Q9BTD8 480 aaKnown RBP29.58■■■□□ 2.33
PFDN4-205ENST00000493356 KIF3CO14782 793 aa29.57■■■□□ 2.32
PFDN4-205ENST00000493356 HSP90AB1P08238 724 aaKnown RBP29.57■■■□□ 2.32
PFDN4-205ENST00000493356 TGFB2P61812 414 aa29.57■■■□□ 2.32
PFDN4-205ENST00000493356 RC3H1Q5TC82 1133 aaKnown RBP29.57■■■□□ 2.32
PFDN4-205ENST00000493356 ADRA2BP18089 450 aa29.56■■■□□ 2.32
PFDN4-205ENST00000493356 ARHGEF1Q92888 912 aaKnown RBP29.56■■■□□ 2.32
PFDN4-205ENST00000493356 C4AP0C0L4 1744 aa29.56■■■□□ 2.32
PFDN4-205ENST00000493356 KDM6AO15550 1401 aaPredicted RBP29.55■■■□□ 2.32
PFDN4-205ENST00000493356 CNTNAP4Q9C0A0 1308 aa29.55■■■□□ 2.32
PFDN4-205ENST00000493356 MYH14Q7Z406 1995 aaKnown RBP29.54■■■□□ 2.32
PFDN4-205ENST00000493356 PLEKHO1Q53GL0 409 aaPredicted RBP29.54■■■□□ 2.32
PFDN4-205ENST00000493356 BCS1LQ9Y276 419 aa29.54■■■□□ 2.32
PFDN4-205ENST00000493356 A0A0G2JLW4 131 aa29.53■■■□□ 2.32
PFDN4-205ENST00000493356 GYS1P13807 737 aa29.53■■■□□ 2.32
PFDN4-205ENST00000493356 RPS6KA4O75676 772 aa29.52■■■□□ 2.32
PFDN4-205ENST00000493356 ZNF530Q6P9A1 599 aaPredicted RBP29.52■■■□□ 2.32
PFDN4-205ENST00000493356 BRCA1P38398 1863 aaKnown RBP29.52■■■□□ 2.32
PFDN4-205ENST00000493356 CABP4P57796 275 aa29.51■■■□□ 2.31
PFDN4-205ENST00000493356 CCDC87Q9NVE4 849 aa29.51■■■□□ 2.31
PFDN4-205ENST00000493356 RFC4P35249 363 aa29.5■■■□□ 2.31
PFDN4-205ENST00000493356 AMOTQ4VCS5 1084 aa29.5■■■□□ 2.31
PFDN4-205ENST00000493356 DPEP1P16444 411 aa29.49■■■□□ 2.31
PFDN4-205ENST00000493356 PANK3Q9H999 370 aa29.48■■■□□ 2.31
PFDN4-205ENST00000493356 PARP3Q9Y6F1 533 aa29.48■■■□□ 2.31
PFDN4-205ENST00000493356 MTHFSP49914 203 aa29.46■■■□□ 2.31
PFDN4-205ENST00000493356 ARHGAP27Q6ZUM4 889 aa29.46■■■□□ 2.31
PFDN4-205ENST00000493356 AEBP1Q8IUX7 1158 aa29.46■■■□□ 2.31
PFDN4-205ENST00000493356 PTCD1O75127 700 aaKnown RBP29.45■■■□□ 2.31
PFDN4-205ENST00000493356 ARFGEF1Q9Y6D6 1849 aa29.44■■■□□ 2.3
PFDN4-205ENST00000493356 FCHSD2O94868 740 aa29.44■■■□□ 2.3
PFDN4-205ENST00000493356 TJP1Q07157 1748 aa29.44■■■□□ 2.3
PFDN4-205ENST00000493356 CLSPNQ9HAW4 1339 aa29.44■■■□□ 2.3
PFDN4-205ENST00000493356 C1orf141Q5JVX7 400 aa29.43■■■□□ 2.3
PFDN4-205ENST00000493356 KCNA3P22001 575 aa29.42■■■□□ 2.3
PFDN4-205ENST00000493356 CRKLP46109 303 aaKnown RBP29.42■■■□□ 2.3
PFDN4-205ENST00000493356 NFATC2IPQ8NCF5 419 aa29.42■■■□□ 2.3
PFDN4-205ENST00000493356 TOMM70O94826 608 aa29.41■■■□□ 2.3
PFDN4-205ENST00000493356 EIF4G2P78344 907 aaKnown RBP eCLIP29.41■■■□□ 2.3
PFDN4-205ENST00000493356 SCN11AQ9UI33 1791 aa29.4■■■□□ 2.3
PFDN4-205ENST00000493356 HSPA5P11021 654 aaKnown RBP29.4■■■□□ 2.3
PFDN4-205ENST00000493356 MORC1Q86VD1 984 aa29.4■■■□□ 2.3
PFDN4-205ENST00000493356 SRP68Q9UHB9 627 aaKnown RBP29.4■■■□□ 2.3
PFDN4-205ENST00000493356 APLP1P51693 650 aa29.39■■■□□ 2.3
PFDN4-205ENST00000493356 SULT6B1Q6IMI4 303 aa29.39■■■□□ 2.3
PFDN4-205ENST00000493356 NMRK2Q9NPI5 230 aa29.39■■■□□ 2.3
PFDN4-205ENST00000493356 USP42Q9H9J4 1324 aaKnown RBP29.39■■■□□ 2.3
PFDN4-205ENST00000493356 FKBP8Q14318 412 aa29.38■■■□□ 2.29
PFDN4-205ENST00000493356 DDR1Q08345 913 aa29.37■■■□□ 2.29
PFDN4-205ENST00000493356 ADAMTS7Q9UKP4 1686 aa29.37■■■□□ 2.29
PFDN4-205ENST00000493356 PIM2Q9P1W9 311 aa29.36■■■□□ 2.29
PFDN4-205ENST00000493356 C9orf131Q5VYM1 1079 aa29.35■■■□□ 2.29
PFDN4-205ENST00000493356 IL13P35225 146 aa29.33■■■□□ 2.29
PFDN4-205ENST00000493356 INTS5Q6P9B9 1019 aaKnown RBP29.33■■■□□ 2.29
PFDN4-205ENST00000493356 PCGF6Q9BYE7 350 aa29.33■■■□□ 2.29
PFDN4-205ENST00000493356 DALRD3Q5D0E6 543 aaKnown RBP29.32■■■□□ 2.28
PFDN4-205ENST00000493356 DNAJC5GQ8N7S2 189 aa29.31■■■□□ 2.28
PFDN4-205ENST00000493356 POLRMTO00411 1230 aaKnown RBP29.29■■■□□ 2.28
PFDN4-205ENST00000493356 CHRNA5P30532 468 aa29.29■■■□□ 2.28
PFDN4-205ENST00000493356 AKAP4Q5JQC9 854 aa29.29■■■□□ 2.28
PFDN4-205ENST00000493356 DNAJC10Q8IXB1 793 aa29.29■■■□□ 2.28
PFDN4-205ENST00000493356 TM4SF1P30408 202 aa29.28■■■□□ 2.28
PFDN4-205ENST00000493356 RBM46Q8TBY0 533 aaKnown RBP29.28■■■□□ 2.28
PFDN4-205ENST00000493356 KNSTRNQ9Y448 316 aa29.28■■■□□ 2.28
PFDN4-205ENST00000493356 WDR90Q96KV7 1748 aa29.28■■■□□ 2.28
PFDN4-205ENST00000493356 VIRMAQ69YN4 1812 aaKnown RBP29.27■■■□□ 2.28
PFDN4-205ENST00000493356 SLC52A2Q9HAB3 445 aa29.27■■■□□ 2.28
PFDN4-205ENST00000493356 MRC1P22897 1456 aa29.27■■■□□ 2.28
PFDN4-205ENST00000493356 SBF1O95248 1867 aa29.27■■■□□ 2.28
PFDN4-205ENST00000493356 SOS1Q07889 1333 aaPredicted RBP29.26■■■□□ 2.27
PFDN4-205ENST00000493356 KCPQ6ZWJ8 1503 aa29.26■■■□□ 2.27
PFDN4-205ENST00000493356 USPL1Q5W0Q7 1092 aa29.26■■■□□ 2.27
PFDN4-205ENST00000493356 LGR6Q9HBX8 967 aa29.26■■■□□ 2.27
PFDN4-205ENST00000493356 RNF181Q9P0P0 153 aa29.26■■■□□ 2.27
PFDN4-205ENST00000493356 ZPR1O75312 459 aa29.25■■■□□ 2.27
PFDN4-205ENST00000493356 C16orf71Q8IYS4 520 aaPredicted RBP29.24■■■□□ 2.27
PFDN4-205ENST00000493356 AFDNP55196 1824 aaKnown RBP29.24■■■□□ 2.27
PFDN4-205ENST00000493356 KDM2BQ8NHM5 1336 aa29.23■■■□□ 2.27
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms