RNA–Protein interactions for RNA: ENST00000493161.1

SAMM50-204, Transcript of SAMM50 sorting and assembly machinery component, humanhuman

TSL 3

Gene SAMM50, Length 829 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMM50-204ENST00000493161 SLC4A9Q96Q91 983 aa18.98■□□□□ 0.63
SAMM50-204ENST00000493161 MMP10P09238 476 aa18.97■□□□□ 0.63
SAMM50-204ENST00000493161 KDRP35968 1356 aa18.95■□□□□ 0.62
SAMM50-204ENST00000493161 POLR3GLQ9BT43 218 aa18.95■□□□□ 0.62
SAMM50-204ENST00000493161 KIAA1551Q9HCM1 1747 aa18.94■□□□□ 0.62
SAMM50-204ENST00000493161 IFFO2Q5TF58 517 aa18.94■□□□□ 0.62
SAMM50-204ENST00000493161 PXDNLA1KZ92 1463 aa18.94■□□□□ 0.62
SAMM50-204ENST00000493161 HSPA6P17066 643 aa18.93■□□□□ 0.62
SAMM50-204ENST00000493161 RBM42Q9BTD8 480 aaKnown RBP18.93■□□□□ 0.62
SAMM50-204ENST00000493161 CICQ96RK0 1608 aaPredicted RBP18.92■□□□□ 0.62
SAMM50-204ENST00000493161 N4BP2Q86UW6 1770 aaPredicted RBP18.92■□□□□ 0.62
SAMM50-204ENST00000493161 A0A0G2JLW4 131 aa18.92■□□□□ 0.62
SAMM50-204ENST00000493161 KIF3CO14782 793 aa18.92■□□□□ 0.62
SAMM50-204ENST00000493161 TRIM26Q12899 539 aaPredicted RBP18.92■□□□□ 0.62
SAMM50-204ENST00000493161 TRAPPC3LQ5T215 181 aa18.92■□□□□ 0.62
SAMM50-204ENST00000493161 ARHGEF1Q92888 912 aaKnown RBP18.92■□□□□ 0.62
SAMM50-204ENST00000493161 RTCBQ9Y3I0 505 aaKnown RBP18.92■□□□□ 0.62
SAMM50-204ENST00000493161 KIF13BQ9NQT8 1826 aa18.91■□□□□ 0.62
SAMM50-204ENST00000493161 ERVV-2B6SEH9 535 aa18.9■□□□□ 0.62
SAMM50-204ENST00000493161 BCS1LQ9Y276 419 aa18.9■□□□□ 0.62
SAMM50-204ENST00000493161 KDM6AO15550 1401 aaPredicted RBP18.9■□□□□ 0.62
SAMM50-204ENST00000493161 COL5A3P25940 1745 aaPredicted RBP18.89■□□□□ 0.61
SAMM50-204ENST00000493161 GYS1P13807 737 aa18.89■□□□□ 0.61
SAMM50-204ENST00000493161 DCAF5Q96JK2 942 aa18.89■□□□□ 0.61
SAMM50-204ENST00000493161 C10orf71Q711Q0 1435 aa18.89■□□□□ 0.61
SAMM50-204ENST00000493161 DPEP1P16444 411 aa18.88■□□□□ 0.61
SAMM50-204ENST00000493161 TGFB2P61812 414 aa18.88■□□□□ 0.61
SAMM50-204ENST00000493161 RC3H1Q5TC82 1133 aaKnown RBP18.88■□□□□ 0.61
SAMM50-204ENST00000493161 ZNF530Q6P9A1 599 aaPredicted RBP18.88■□□□□ 0.61
SAMM50-204ENST00000493161 AEBP1Q8IUX7 1158 aa18.88■□□□□ 0.61
SAMM50-204ENST00000493161 NLGN1Q8N2Q7 840 aa18.88■□□□□ 0.61
SAMM50-204ENST00000493161 ZNF831Q5JPB2 1677 aa18.88■□□□□ 0.61
SAMM50-204ENST00000493161 RPS6KA4O75676 772 aa18.87■□□□□ 0.61
SAMM50-204ENST00000493161 PLEKHO1Q53GL0 409 aaPredicted RBP18.87■□□□□ 0.61
SAMM50-204ENST00000493161 C4AP0C0L4 1744 aa18.86■□□□□ 0.61
SAMM50-204ENST00000493161 CNTNAP4Q9C0A0 1308 aa18.86■□□□□ 0.61
SAMM50-204ENST00000493161 CABP4P57796 275 aa18.86■□□□□ 0.61
SAMM50-204ENST00000493161 PANK3Q9H999 370 aa18.86■□□□□ 0.61
SAMM50-204ENST00000493161 PLEKHG2Q9H7P9 1386 aa18.85■□□□□ 0.61
SAMM50-204ENST00000493161 MYH14Q7Z406 1995 aaKnown RBP18.85■□□□□ 0.61
SAMM50-204ENST00000493161 PTCD1O75127 700 aaKnown RBP18.85■□□□□ 0.61
SAMM50-204ENST00000493161 HSP90AB1P08238 724 aaKnown RBP18.85■□□□□ 0.61
SAMM50-204ENST00000493161 KCNA3P22001 575 aa18.85■□□□□ 0.61
SAMM50-204ENST00000493161 RFC4P35249 363 aa18.85■□□□□ 0.61
SAMM50-204ENST00000493161 ARHGAP27Q6ZUM4 889 aa18.85■□□□□ 0.61
SAMM50-204ENST00000493161 TIMELESSQ9UNS1 1208 aa18.85■□□□□ 0.61
SAMM50-204ENST00000493161 ADRA2BP18089 450 aa18.84■□□□□ 0.61
SAMM50-204ENST00000493161 SRP68Q9UHB9 627 aaKnown RBP18.84■□□□□ 0.61
SAMM50-204ENST00000493161 MTHFSP49914 203 aa18.83■□□□□ 0.6
SAMM50-204ENST00000493161 NFATC2IPQ8NCF5 419 aa18.83■□□□□ 0.6
SAMM50-204ENST00000493161 CCDC87Q9NVE4 849 aa18.83■□□□□ 0.6
SAMM50-204ENST00000493161 PARP3Q9Y6F1 533 aa18.83■□□□□ 0.6
SAMM50-204ENST00000493161 FCHSD2O94868 740 aa18.82■□□□□ 0.6
SAMM50-204ENST00000493161 HSPA5P11021 654 aaKnown RBP18.82■□□□□ 0.6
SAMM50-204ENST00000493161 CRKLP46109 303 aaKnown RBP18.82■□□□□ 0.6
SAMM50-204ENST00000493161 AMOTQ4VCS5 1084 aa18.82■□□□□ 0.6
SAMM50-204ENST00000493161 NMRK2Q9NPI5 230 aa18.82■□□□□ 0.6
SAMM50-204ENST00000493161 BRCA1P38398 1863 aaKnown RBP18.82■□□□□ 0.6
SAMM50-204ENST00000493161 FKBP8Q14318 412 aa18.81■□□□□ 0.6
SAMM50-204ENST00000493161 DDR1Q08345 913 aa18.8■□□□□ 0.6
SAMM50-204ENST00000493161 TJP1Q07157 1748 aa18.8■□□□□ 0.6
SAMM50-204ENST00000493161 C1orf141Q5JVX7 400 aa18.79■□□□□ 0.6
SAMM50-204ENST00000493161 SULT6B1Q6IMI4 303 aa18.79■□□□□ 0.6
SAMM50-204ENST00000493161 MORC1Q86VD1 984 aa18.79■□□□□ 0.6
SAMM50-204ENST00000493161 PCGF6Q9BYE7 350 aa18.79■□□□□ 0.6
SAMM50-204ENST00000493161 TOMM70O94826 608 aa18.78■□□□□ 0.6
SAMM50-204ENST00000493161 EIF4G2P78344 907 aaKnown RBP eCLIP18.78■□□□□ 0.6
SAMM50-204ENST00000493161 C9orf131Q5VYM1 1079 aa18.78■□□□□ 0.6
SAMM50-204ENST00000493161 INTS5Q6P9B9 1019 aaKnown RBP18.78■□□□□ 0.6
SAMM50-204ENST00000493161 USP42Q9H9J4 1324 aaKnown RBP18.77■□□□□ 0.6
SAMM50-204ENST00000493161 CHRNA5P30532 468 aa18.77■□□□□ 0.6
SAMM50-204ENST00000493161 IL13P35225 146 aa18.77■□□□□ 0.6
SAMM50-204ENST00000493161 DNAJC5GQ8N7S2 189 aa18.77■□□□□ 0.6
SAMM50-204ENST00000493161 ADAMTS7Q9UKP4 1686 aa18.76■□□□□ 0.59
SAMM50-204ENST00000493161 APLP1P51693 650 aa18.76■□□□□ 0.59
SAMM50-204ENST00000493161 PIM2Q9P1W9 311 aa18.76■□□□□ 0.59
SAMM50-204ENST00000493161 DNAJC10Q8IXB1 793 aa18.75■□□□□ 0.59
SAMM50-204ENST00000493161 LGR6Q9HBX8 967 aa18.75■□□□□ 0.59
SAMM50-204ENST00000493161 ARFGEF1Q9Y6D6 1849 aa18.74■□□□□ 0.59
SAMM50-204ENST00000493161 SCN11AQ9UI33 1791 aa18.74■□□□□ 0.59
SAMM50-204ENST00000493161 TM4SF1P30408 202 aa18.74■□□□□ 0.59
SAMM50-204ENST00000493161 POLRMTO00411 1230 aaKnown RBP18.73■□□□□ 0.59
SAMM50-204ENST00000493161 DALRD3Q5D0E6 543 aaKnown RBP18.73■□□□□ 0.59
SAMM50-204ENST00000493161 CLSPNQ9HAW4 1339 aa18.73■□□□□ 0.59
SAMM50-204ENST00000493161 HTRA3P83110 453 aa18.72■□□□□ 0.59
SAMM50-204ENST00000493161 SLC39A6Q13433 755 aa18.72■□□□□ 0.59
SAMM50-204ENST00000493161 USPL1Q5W0Q7 1092 aa18.72■□□□□ 0.59
SAMM50-204ENST00000493161 KCPQ6ZWJ8 1503 aa18.72■□□□□ 0.59
SAMM50-204ENST00000493161 AKAP4Q5JQC9 854 aa18.71■□□□□ 0.59
SAMM50-204ENST00000493161 SLC52A2Q9HAB3 445 aa18.71■□□□□ 0.59
SAMM50-204ENST00000493161 RNF181Q9P0P0 153 aa18.71■□□□□ 0.59
SAMM50-204ENST00000493161 KNSTRNQ9Y448 316 aa18.7■□□□□ 0.58
SAMM50-204ENST00000493161 SOS1Q07889 1333 aaPredicted RBP18.7■□□□□ 0.58
SAMM50-204ENST00000493161 RNMTO43148 476 aaKnown RBP18.69■□□□□ 0.58
SAMM50-204ENST00000493161 HMOX1P09601 288 aa18.69■□□□□ 0.58
SAMM50-204ENST00000493161 CYP19A1P11511 503 aaPredicted RBP18.69■□□□□ 0.58
SAMM50-204ENST00000493161 RBM46Q8TBY0 533 aaKnown RBP18.69■□□□□ 0.58
SAMM50-204ENST00000493161 RRAGCQ9HB90 399 aa18.69■□□□□ 0.58
SAMM50-204ENST00000493161 ZPR1O75312 459 aa18.68■□□□□ 0.58
SAMM50-204ENST00000493161 NFIXQ14938 502 aa18.68■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms