RNA–Protein interactions for RNA: ENST00000492932.5

PDCD4-210, Transcript of programmed cell death 4, humanhuman

TSL 3

Gene PDCD4, Length 813 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD4-210ENST00000492932 GNPATO15228 680 aa15.79■□□□□ 0.12
PDCD4-210ENST00000492932 RBM42Q9BTD8 480 aaKnown RBP15.79■□□□□ 0.12
PDCD4-210ENST00000492932 ATG3Q9NT62 314 aa15.79■□□□□ 0.12
PDCD4-210ENST00000492932 CHD4Q14839 1912 aa15.78■□□□□ 0.12
PDCD4-210ENST00000492932 MTHFSP49914 203 aa15.78■□□□□ 0.12
PDCD4-210ENST00000492932 LINC00116Q8NCU8 138 aa15.78■□□□□ 0.12
PDCD4-210ENST00000492932 KIF7Q2M1P5 1343 aa15.77■□□□□ 0.12
PDCD4-210ENST00000492932 SULT6B1Q6IMI4 303 aa15.77■□□□□ 0.12
PDCD4-210ENST00000492932 RTCBQ9Y3I0 505 aaKnown RBP15.77■□□□□ 0.12
PDCD4-210ENST00000492932 ITPK1Q13572 414 aa15.75■□□□□ 0.11
PDCD4-210ENST00000492932 TRAPPC3LQ5T215 181 aa15.75■□□□□ 0.11
PDCD4-210ENST00000492932 AEBP1Q8IUX7 1158 aa15.75■□□□□ 0.11
PDCD4-210ENST00000492932 UBR3Q6ZT12 1888 aa15.74■□□□□ 0.11
PDCD4-210ENST00000492932 IL13P35225 146 aa15.73■□□□□ 0.11
PDCD4-210ENST00000492932 AMER1Q5JTC6 1135 aaPredicted RBP15.73■□□□□ 0.11
PDCD4-210ENST00000492932 YBX3P16989 372 aaKnown RBP eCLIP15.72■□□□□ 0.11
PDCD4-210ENST00000492932 ADRA2BP18089 450 aa15.72■□□□□ 0.11
PDCD4-210ENST00000492932 RFC4P35249 363 aa15.72■□□□□ 0.11
PDCD4-210ENST00000492932 CC2D1BQ5T0F9 858 aaKnown RBP15.72■□□□□ 0.11
PDCD4-210ENST00000492932 RC3H1Q5TC82 1133 aaKnown RBP15.72■□□□□ 0.11
PDCD4-210ENST00000492932 SMIM5Q71RC9 77 aa15.72■□□□□ 0.11
PDCD4-210ENST00000492932 AMIGO3Q86WK7 504 aa15.72■□□□□ 0.11
PDCD4-210ENST00000492932 KDRP35968 1356 aa15.72■□□□□ 0.11
PDCD4-210ENST00000492932 KDM6AO15550 1401 aaPredicted RBP15.71■□□□□ 0.11
PDCD4-210ENST00000492932 PTCD1O75127 700 aaKnown RBP15.71■□□□□ 0.11
PDCD4-210ENST00000492932 AKAP4Q5JQC9 854 aa15.71■□□□□ 0.11
PDCD4-210ENST00000492932 NLGN1Q8N2Q7 840 aa15.71■□□□□ 0.11
PDCD4-210ENST00000492932 NFATC2IPQ8NCF5 419 aa15.71■□□□□ 0.11
PDCD4-210ENST00000492932 CNTNAP4Q9C0A0 1308 aa15.7■□□□□ 0.1
PDCD4-210ENST00000492932 ZNF831Q5JPB2 1677 aa15.7■□□□□ 0.1
PDCD4-210ENST00000492932 DIAPH1O60610 1272 aaKnown RBP15.7■□□□□ 0.1
PDCD4-210ENST00000492932 GIGYF1O75420 1035 aaPredicted RBP15.7■□□□□ 0.1
PDCD4-210ENST00000492932 MMP10P09238 476 aa15.69■□□□□ 0.1
PDCD4-210ENST00000492932 RPS6KA4O75676 772 aa15.68■□□□□ 0.1
PDCD4-210ENST00000492932 HMOX1P09601 288 aa15.68■□□□□ 0.1
PDCD4-210ENST00000492932 CNGB1Q14028 1251 aaPredicted RBP15.68■□□□□ 0.1
PDCD4-210ENST00000492932 ARHGEF1Q92888 912 aaKnown RBP15.68■□□□□ 0.1
PDCD4-210ENST00000492932 SLC4A9Q96Q91 983 aa15.67■□□□□ 0.1
PDCD4-210ENST00000492932 CCDC87Q9NVE4 849 aa15.67■□□□□ 0.1
PDCD4-210ENST00000492932 PARP3Q9Y6F1 533 aa15.67■□□□□ 0.1
PDCD4-210ENST00000492932 PER1O15534 1290 aaPredicted RBP15.66■□□□□ 0.1
PDCD4-210ENST00000492932 C1QTNF8P60827 252 aa15.66■□□□□ 0.1
PDCD4-210ENST00000492932 SLC52A2Q9HAB3 445 aa15.66■□□□□ 0.1
PDCD4-210ENST00000492932 WWC3Q9ULE0 1092 aa15.66■□□□□ 0.1
PDCD4-210ENST00000492932 U2SURPO15042 1029 aaKnown RBP15.65■□□□□ 0.1
PDCD4-210ENST00000492932 CRKLP46109 303 aaKnown RBP15.65■□□□□ 0.1
PDCD4-210ENST00000492932 TGFB2P61812 414 aa15.65■□□□□ 0.1
PDCD4-210ENST00000492932 COL5A3P25940 1745 aaPredicted RBP15.65■□□□□ 0.1
PDCD4-210ENST00000492932 SENP3-EIF4A1A0A087X0R7 540 aa15.64■□□□□ 0.09
PDCD4-210ENST00000492932 RNMTO43148 476 aaKnown RBP15.64■□□□□ 0.09
PDCD4-210ENST00000492932 NPC1L1Q9UHC9 1359 aa15.63■□□□□ 0.09
PDCD4-210ENST00000492932 SCN11AQ9UI33 1791 aa15.63■□□□□ 0.09
PDCD4-210ENST00000492932 GYS1P13807 737 aa15.63■□□□□ 0.09
PDCD4-210ENST00000492932 CFAP53Q96M91 514 aa15.63■□□□□ 0.09
PDCD4-210ENST00000492932 CICQ96RK0 1608 aaPredicted RBP15.63■□□□□ 0.09
PDCD4-210ENST00000492932 UTRNP46939 3433 aa15.62■□□□□ 0.09
PDCD4-210ENST00000492932 ZPR1O75312 459 aa15.62■□□□□ 0.09
PDCD4-210ENST00000492932 MTHFSDQ2M296 383 aaKnown RBP15.62■□□□□ 0.09
PDCD4-210ENST00000492932 TTC5Q8N0Z6 440 aa15.62■□□□□ 0.09
PDCD4-210ENST00000492932 LGR6Q9HBX8 967 aa15.62■□□□□ 0.09
PDCD4-210ENST00000492932 GPBP1L1Q9HC44 474 aaPredicted RBP15.62■□□□□ 0.09
PDCD4-210ENST00000492932 ATP10DQ9P241 1426 aa15.61■□□□□ 0.09
PDCD4-210ENST00000492932 GAS2L2Q8NHY3 880 aa15.61■□□□□ 0.09
PDCD4-210ENST00000492932 BCS1LQ9Y276 419 aa15.61■□□□□ 0.09
PDCD4-210ENST00000492932 TEFQ10587 303 aa15.6■□□□□ 0.09
PDCD4-210ENST00000492932 USP42Q9H9J4 1324 aaKnown RBP15.6■□□□□ 0.09
PDCD4-210ENST00000492932 C4AP0C0L4 1744 aa15.6■□□□□ 0.09
PDCD4-210ENST00000492932 A0A0G2JLW4 131 aa15.59■□□□□ 0.09
PDCD4-210ENST00000492932 SLC39A6Q13433 755 aa15.59■□□□□ 0.09
PDCD4-210ENST00000492932 DNAJC10Q8IXB1 793 aa15.59■□□□□ 0.09
PDCD4-210ENST00000492932 NUDCQ9Y266 331 aa15.59■□□□□ 0.09
PDCD4-210ENST00000492932 C10orf71Q711Q0 1435 aa15.59■□□□□ 0.09
PDCD4-210ENST00000492932 PXDNLA1KZ92 1463 aa15.59■□□□□ 0.09
PDCD4-210ENST00000492932 MRC1P22897 1456 aa15.59■□□□□ 0.09
PDCD4-210ENST00000492932 TJP1Q07157 1748 aa15.58■□□□□ 0.08
PDCD4-210ENST00000492932 GNAT3A8MTJ3 354 aa15.58■□□□□ 0.08
PDCD4-210ENST00000492932 VSIG10Q8N0Z9 540 aa15.58■□□□□ 0.08
PDCD4-210ENST00000492932 ZNF526Q8TF50 670 aaPredicted RBP15.58■□□□□ 0.08
PDCD4-210ENST00000492932 SRP68Q9UHB9 627 aaKnown RBP15.58■□□□□ 0.08
PDCD4-210ENST00000492932 FCHSD2O94868 740 aa15.57■□□□□ 0.08
PDCD4-210ENST00000492932 INTS5Q6P9B9 1019 aaKnown RBP15.57■□□□□ 0.08
PDCD4-210ENST00000492932 KIF13BQ9NQT8 1826 aa15.57■□□□□ 0.08
PDCD4-210ENST00000492932 STARD3NLO95772 234 aa15.56■□□□□ 0.08
PDCD4-210ENST00000492932 CYP19A1P11511 503 aaPredicted RBP15.56■□□□□ 0.08
PDCD4-210ENST00000492932 DPEP1P16444 411 aa15.56■□□□□ 0.08
PDCD4-210ENST00000492932 FKBP8Q14318 412 aa15.56■□□□□ 0.08
PDCD4-210ENST00000492932 ARHGAP27Q6ZUM4 889 aa15.56■□□□□ 0.08
PDCD4-210ENST00000492932 NPM2Q86SE8 214 aaKnown RBP15.56■□□□□ 0.08
PDCD4-210ENST00000492932 PIM2Q9P1W9 311 aa15.56■□□□□ 0.08
PDCD4-210ENST00000492932 MYH14Q7Z406 1995 aaKnown RBP15.55■□□□□ 0.08
PDCD4-210ENST00000492932 SOS1Q07889 1333 aaPredicted RBP15.55■□□□□ 0.08
PDCD4-210ENST00000492932 USPL1Q5W0Q7 1092 aa15.55■□□□□ 0.08
PDCD4-210ENST00000492932 TEX13AQ9BXU3 409 aaPredicted RBP15.55■□□□□ 0.08
PDCD4-210ENST00000492932 N4BP2Q86UW6 1770 aaPredicted RBP15.54■□□□□ 0.08
PDCD4-210ENST00000492932 COL3A1P02461 1466 aaPredicted RBP15.54■□□□□ 0.08
PDCD4-210ENST00000492932 ADCY9O60503 1353 aa15.54■□□□□ 0.08
PDCD4-210ENST00000492932 COL15A1P39059 1388 aa15.54■□□□□ 0.08
PDCD4-210ENST00000492932 KCPQ6ZWJ8 1503 aa15.53■□□□□ 0.08
PDCD4-210ENST00000492932 VIRMAQ69YN4 1812 aaKnown RBP15.53■□□□□ 0.08
PDCD4-210ENST00000492932 A0A087WZG4 1122 aa15.53■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms