RNA–Protein interactions for RNA: ENST00000492728.1

CHD1L-209, Transcript of chromodomain helicase DNA binding protein 1 like, humanhuman

TSL 2

Gene CHD1L, Length 662 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1L-209ENST00000492728 PLEKHO1Q53GL0 409 aaPredicted RBP25.17■■□□□ 1.62
CHD1L-209ENST00000492728 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP25.15■■□□□ 1.62
CHD1L-209ENST00000492728 MTHFSP49914 203 aa25.15■■□□□ 1.62
CHD1L-209ENST00000492728 AMOTQ4VCS5 1084 aa25.15■■□□□ 1.62
CHD1L-209ENST00000492728 CC2D1BQ5T0F9 858 aaKnown RBP25.15■■□□□ 1.62
CHD1L-209ENST00000492728 DCAF5Q96JK2 942 aa25.15■■□□□ 1.62
CHD1L-209ENST00000492728 ERVV-2B6SEH9 535 aa25.14■■□□□ 1.62
CHD1L-209ENST00000492728 ATP6V1AP38606 617 aa25.14■■□□□ 1.62
CHD1L-209ENST00000492728 FLAD1Q8NFF5 587 aa25.14■■□□□ 1.62
CHD1L-209ENST00000492728 ZNF831Q5JPB2 1677 aa25.13■■□□□ 1.61
CHD1L-209ENST00000492728 HSP90AB1P08238 724 aaKnown RBP25.12■■□□□ 1.61
CHD1L-209ENST00000492728 COL3A1P02461 1466 aaPredicted RBP25.11■■□□□ 1.61
CHD1L-209ENST00000492728 SSFA2P28290 1259 aa25.11■■□□□ 1.61
CHD1L-209ENST00000492728 COL5A3P25940 1745 aaPredicted RBP25.11■■□□□ 1.61
CHD1L-209ENST00000492728 GNPATO15228 680 aa25.1■■□□□ 1.61
CHD1L-209ENST00000492728 HMGB2P26583 209 aaKnown RBP25.09■■□□□ 1.61
CHD1L-209ENST00000492728 GPR162Q16538 588 aa25.09■■□□□ 1.61
CHD1L-209ENST00000492728 NPC1L1Q9UHC9 1359 aa25.08■■□□□ 1.61
CHD1L-209ENST00000492728 HMOX1P09601 288 aa25.08■■□□□ 1.61
CHD1L-209ENST00000492728 CABP4P57796 275 aa25.08■■□□□ 1.61
CHD1L-209ENST00000492728 C1orf141Q5JVX7 400 aa25.08■■□□□ 1.61
CHD1L-209ENST00000492728 SCN11AQ9UI33 1791 aa25.08■■□□□ 1.6
CHD1L-209ENST00000492728 YBX3P16989 372 aaKnown RBP eCLIP25.07■■□□□ 1.61e-6■□□□□ 11
CHD1L-209ENST00000492728 CNGB1Q14028 1251 aaPredicted RBP25.07■■□□□ 1.6
CHD1L-209ENST00000492728 PELP1Q8IZL8 1130 aaKnown RBP25.07■■□□□ 1.6
CHD1L-209ENST00000492728 RBM42Q9BTD8 480 aaKnown RBP25.07■■□□□ 1.6
CHD1L-209ENST00000492728 CHD4Q14839 1912 aa25.06■■□□□ 1.6
CHD1L-209ENST00000492728 ZNF784Q8NCA9 323 aaPredicted RBP25.06■■□□□ 1.6
CHD1L-209ENST00000492728 NFATC2IPQ8NCF5 419 aa25.05■■□□□ 1.6
CHD1L-209ENST00000492728 TJP1Q07157 1748 aa25.05■■□□□ 1.6
CHD1L-209ENST00000492728 MRC1P22897 1456 aa25.04■■□□□ 1.6
CHD1L-209ENST00000492728 CICQ96RK0 1608 aaPredicted RBP25.03■■□□□ 1.6
CHD1L-209ENST00000492728 ADAMTS7Q9UKP4 1686 aa25.03■■□□□ 1.6
CHD1L-209ENST00000492728 MYH14Q7Z406 1995 aaKnown RBP25.02■■□□□ 1.6
CHD1L-209ENST00000492728 DIAPH1O60610 1272 aaKnown RBP25.02■■□□□ 1.6
CHD1L-209ENST00000492728 AKAP4Q5JQC9 854 aa25.02■■□□□ 1.6
CHD1L-209ENST00000492728 LGR6Q9HBX8 967 aa25.02■■□□□ 1.6
CHD1L-209ENST00000492728 CD2APQ9Y5K6 639 aa25.02■■□□□ 1.6
CHD1L-209ENST00000492728 CNTNAP4Q9C0A0 1308 aa25.02■■□□□ 1.6
CHD1L-209ENST00000492728 PTCD1O75127 700 aaKnown RBP25.01■■□□□ 1.59
CHD1L-209ENST00000492728 C4AP0C0L4 1744 aa25■■□□□ 1.59
CHD1L-209ENST00000492728 MTHFSDQ2M296 383 aaKnown RBP25■■□□□ 1.59
CHD1L-209ENST00000492728 RC3H1Q5TC82 1133 aaKnown RBP24.99■■□□□ 1.59
CHD1L-209ENST00000492728 SLC52A2Q9HAB3 445 aa24.98■■□□□ 1.59
CHD1L-209ENST00000492728 RTCBQ9Y3I0 505 aaKnown RBP24.98■■□□□ 1.59
CHD1L-209ENST00000492728 VIRMAQ69YN4 1812 aaKnown RBP24.98■■□□□ 1.59
CHD1L-209ENST00000492728 RNMTO43148 476 aaKnown RBP24.97■■□□□ 1.59
CHD1L-209ENST00000492728 ARHGEF1Q92888 912 aaKnown RBP24.97■■□□□ 1.59
CHD1L-209ENST00000492728 KCPQ6ZWJ8 1503 aa24.96■■□□□ 1.59
CHD1L-209ENST00000492728 MMP10P09238 476 aa24.96■■□□□ 1.59
CHD1L-209ENST00000492728 RPS6KA4O75676 772 aa24.95■■□□□ 1.58
CHD1L-209ENST00000492728 CRKLP46109 303 aaKnown RBP24.95■■□□□ 1.58
CHD1L-209ENST00000492728 TRAPPC3LQ5T215 181 aa24.95■■□□□ 1.58
CHD1L-209ENST00000492728 WWC3Q9ULE0 1092 aa24.95■■□□□ 1.58
CHD1L-209ENST00000492728 KIAA1551Q9HCM1 1747 aa24.95■■□□□ 1.58
CHD1L-209ENST00000492728 GYS1P13807 737 aa24.93■■□□□ 1.58
CHD1L-209ENST00000492728 ADRA2BP18089 450 aa24.93■■□□□ 1.58
CHD1L-209ENST00000492728 SLC39A6Q13433 755 aa24.93■■□□□ 1.58
CHD1L-209ENST00000492728 KIF13BQ9NQT8 1826 aa24.91■■□□□ 1.58
CHD1L-209ENST00000492728 PXDNLA1KZ92 1463 aa24.91■■□□□ 1.58
CHD1L-209ENST00000492728 U2SURPO15042 1029 aaKnown RBP24.91■■□□□ 1.58
CHD1L-209ENST00000492728 DNAJC10Q8IXB1 793 aa24.91■■□□□ 1.58
CHD1L-209ENST00000492728 C10orf71Q711Q0 1435 aa24.9■■□□□ 1.58
CHD1L-209ENST00000492728 GRIN3BO60391 1043 aa24.9■■□□□ 1.58
CHD1L-209ENST00000492728 INTS5Q6P9B9 1019 aaKnown RBP24.9■■□□□ 1.58
CHD1L-209ENST00000492728 SRP68Q9UHB9 627 aaKnown RBP24.9■■□□□ 1.58
CHD1L-209ENST00000492728 UBR2Q8IWV8 1755 aa24.89■■□□□ 1.57
CHD1L-209ENST00000492728 RFC4P35249 363 aa24.88■■□□□ 1.57
CHD1L-209ENST00000492728 NLGN1Q8N2Q7 840 aa24.87■■□□□ 1.57
CHD1L-209ENST00000492728 USP42Q9H9J4 1324 aaKnown RBP24.86■■□□□ 1.57
CHD1L-209ENST00000492728 N4BP2Q86UW6 1770 aaPredicted RBP24.85■■□□□ 1.57
CHD1L-209ENST00000492728 FKBP8Q14318 412 aa24.85■■□□□ 1.57
CHD1L-209ENST00000492728 IL17REQ8NFR9 667 aa24.85■■□□□ 1.57
CHD1L-209ENST00000492728 SIPA1L3O60292 1781 aaPredicted RBP24.85■■□□□ 1.57
CHD1L-209ENST00000492728 CYP19A1P11511 503 aaPredicted RBP24.84■■□□□ 1.57
CHD1L-209ENST00000492728 PPP2R1AP30153 589 aa24.84■■□□□ 1.57
CHD1L-209ENST00000492728 PHACTR3Q96KR7 559 aa24.84■■□□□ 1.57
CHD1L-209ENST00000492728 RSPH6AQ9H0K4 717 aa24.84■■□□□ 1.57
CHD1L-209ENST00000492728 SOS1Q07889 1333 aaPredicted RBP24.84■■□□□ 1.57
CHD1L-209ENST00000492728 DDR1Q08345 913 aa24.83■■□□□ 1.57
CHD1L-209ENST00000492728 CCDC87Q9NVE4 849 aa24.83■■□□□ 1.57
CHD1L-209ENST00000492728 PRKAR2BP31323 418 aa24.82■■□□□ 1.56
CHD1L-209ENST00000492728 ZBTB1Q9Y2K1 713 aa24.82■■□□□ 1.56
CHD1L-209ENST00000492728 ADCY9O60503 1353 aa24.81■■□□□ 1.56
CHD1L-209ENST00000492728 GAS2L2Q8NHY3 880 aa24.81■■□□□ 1.56
CHD1L-209ENST00000492728 ATP10DQ9P241 1426 aa24.8■■□□□ 1.56
CHD1L-209ENST00000492728 GNAT3A8MTJ3 354 aa24.8■■□□□ 1.56
CHD1L-209ENST00000492728 CEMIPQ8WUJ3 1361 aa24.8■■□□□ 1.56
CHD1L-209ENST00000492728 A0A0G2JLW4 131 aa24.79■■□□□ 1.56
CHD1L-209ENST00000492728 CFAP53Q96M91 514 aa24.79■■□□□ 1.56
CHD1L-209ENST00000492728 PARP3Q9Y6F1 533 aa24.78■■□□□ 1.56
CHD1L-209ENST00000492728 COL15A1P39059 1388 aa24.78■■□□□ 1.56
CHD1L-209ENST00000492728 BRCA1P38398 1863 aaKnown RBP24.77■■□□□ 1.56
CHD1L-209ENST00000492728 DPEP1P16444 411 aa24.77■■□□□ 1.56
CHD1L-209ENST00000492728 TGFB2P61812 414 aa24.77■■□□□ 1.56
CHD1L-209ENST00000492728 USPL1Q5W0Q7 1092 aa24.77■■□□□ 1.56
CHD1L-209ENST00000492728 VSIG10Q8N0Z9 540 aa24.77■■□□□ 1.56
CHD1L-209ENST00000492728 ZNF496Q96IT1 587 aaPredicted RBP24.77■■□□□ 1.56
CHD1L-209ENST00000492728 POLRMTO00411 1230 aaKnown RBP24.75■■□□□ 1.55
CHD1L-209ENST00000492728 BCL2L12Q9HB09 334 aa24.75■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms