RNA–Protein interactions for RNA: ENST00000491825.1

CDC42SE1-205, Transcript of CDC42 small effector 1, humanhuman

TSL 2

Gene CDC42SE1, Length 837 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-205ENST00000491825 UBR3Q6ZT12 1888 aa20.29■□□□□ 0.84
CDC42SE1-205ENST00000491825 SMIM5Q71RC9 77 aa20.29■□□□□ 0.84
CDC42SE1-205ENST00000491825 ATG3Q9NT62 314 aa20.29■□□□□ 0.84
CDC42SE1-205ENST00000491825 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP20.28■□□□□ 0.84
CDC42SE1-205ENST00000491825 SSFA2P28290 1259 aa20.28■□□□□ 0.84
CDC42SE1-205ENST00000491825 PHF14O94880 888 aa20.27■□□□□ 0.84
CDC42SE1-205ENST00000491825 YBX3P16989 372 aaKnown RBP eCLIP20.27■□□□□ 0.84
CDC42SE1-205ENST00000491825 AEBP1Q8IUX7 1158 aa20.27■□□□□ 0.84
CDC42SE1-205ENST00000491825 ERVV-2B6SEH9 535 aa20.26■□□□□ 0.83
CDC42SE1-205ENST00000491825 DCAF5Q96JK2 942 aa20.26■□□□□ 0.83
CDC42SE1-205ENST00000491825 SLC4A9Q96Q91 983 aa20.26■□□□□ 0.83
CDC42SE1-205ENST00000491825 CD2APQ9Y5K6 639 aa20.26■□□□□ 0.83
CDC42SE1-205ENST00000491825 CHD4Q14839 1912 aa20.25■□□□□ 0.83
CDC42SE1-205ENST00000491825 ATP6V1AP38606 617 aa20.25■□□□□ 0.83
CDC42SE1-205ENST00000491825 PLEKHO1Q53GL0 409 aaPredicted RBP20.25■□□□□ 0.83
CDC42SE1-205ENST00000491825 PELP1Q8IZL8 1130 aaKnown RBP20.25■□□□□ 0.83
CDC42SE1-205ENST00000491825 HSP90AB1P08238 724 aaKnown RBP20.24■□□□□ 0.83
CDC42SE1-205ENST00000491825 AMOTQ4VCS5 1084 aa20.24■□□□□ 0.83
CDC42SE1-205ENST00000491825 ZNF530Q6P9A1 599 aaPredicted RBP20.24■□□□□ 0.83
CDC42SE1-205ENST00000491825 GNPATO15228 680 aa20.23■□□□□ 0.83
CDC42SE1-205ENST00000491825 IL13P35225 146 aa20.23■□□□□ 0.83
CDC42SE1-205ENST00000491825 ZNF831Q5JPB2 1677 aa20.22■□□□□ 0.83
CDC42SE1-205ENST00000491825 RALBP1Q15311 655 aa20.22■□□□□ 0.83
CDC42SE1-205ENST00000491825 COL3A1P02461 1466 aaPredicted RBP20.21■□□□□ 0.83
CDC42SE1-205ENST00000491825 GRIN3BO60391 1043 aa20.2■□□□□ 0.82
CDC42SE1-205ENST00000491825 MTHFSP49914 203 aa20.2■□□□□ 0.82
CDC42SE1-205ENST00000491825 SULT6B1Q6IMI4 303 aa20.2■□□□□ 0.82
CDC42SE1-205ENST00000491825 PPP2R1AP30153 589 aa20.19■□□□□ 0.82
CDC42SE1-205ENST00000491825 CNGB1Q14028 1251 aaPredicted RBP20.19■□□□□ 0.82
CDC42SE1-205ENST00000491825 CABP4P57796 275 aa20.18■□□□□ 0.82
CDC42SE1-205ENST00000491825 CNTNAP4Q9C0A0 1308 aa20.18■□□□□ 0.82
CDC42SE1-205ENST00000491825 COL5A3P25940 1745 aaPredicted RBP20.17■□□□□ 0.82
CDC42SE1-205ENST00000491825 RC3H1Q5TC82 1133 aaKnown RBP20.17■□□□□ 0.82
CDC42SE1-205ENST00000491825 RBM42Q9BTD8 480 aaKnown RBP20.17■□□□□ 0.82
CDC42SE1-205ENST00000491825 PRKRIP1Q9H875 184 aaPredicted RBP20.17■□□□□ 0.82
CDC42SE1-205ENST00000491825 C1orf141Q5JVX7 400 aa20.16■□□□□ 0.82
CDC42SE1-205ENST00000491825 RTCBQ9Y3I0 505 aaKnown RBP20.15■□□□□ 0.82
CDC42SE1-205ENST00000491825 MYBBP1AQ9BQG0 1328 aaKnown RBP20.15■□□□□ 0.82
CDC42SE1-205ENST00000491825 CICQ96RK0 1608 aaPredicted RBP20.14■□□□□ 0.81
CDC42SE1-205ENST00000491825 ADRA2BP18089 450 aa20.14■□□□□ 0.81
CDC42SE1-205ENST00000491825 NFATC2IPQ8NCF5 419 aa20.14■□□□□ 0.81
CDC42SE1-205ENST00000491825 MRC1P22897 1456 aa20.13■□□□□ 0.81
CDC42SE1-205ENST00000491825 MMP10P09238 476 aa20.13■□□□□ 0.81
CDC42SE1-205ENST00000491825 TRAPPC3LQ5T215 181 aa20.13■□□□□ 0.81
CDC42SE1-205ENST00000491825 RPS6KA4O75676 772 aa20.12■□□□□ 0.81
CDC42SE1-205ENST00000491825 C1QTNF8P60827 252 aa20.12■□□□□ 0.81
CDC42SE1-205ENST00000491825 ARHGEF1Q92888 912 aaKnown RBP20.12■□□□□ 0.81
CDC42SE1-205ENST00000491825 ADCY9O60503 1353 aa20.11■□□□□ 0.81
CDC42SE1-205ENST00000491825 PTCD1O75127 700 aaKnown RBP20.11■□□□□ 0.81
CDC42SE1-205ENST00000491825 AKAP4Q5JQC9 854 aa20.11■□□□□ 0.81
CDC42SE1-205ENST00000491825 CFAP53Q96M91 514 aa20.11■□□□□ 0.81
CDC42SE1-205ENST00000491825 PXDNLA1KZ92 1463 aa20.11■□□□□ 0.81
CDC42SE1-205ENST00000491825 C10orf71Q711Q0 1435 aa20.1■□□□□ 0.81
CDC42SE1-205ENST00000491825 GYS1P13807 737 aa20.1■□□□□ 0.81
CDC42SE1-205ENST00000491825 NLGN1Q8N2Q7 840 aa20.1■□□□□ 0.81
CDC42SE1-205ENST00000491825 TJP1Q07157 1748 aa20.1■□□□□ 0.81
CDC42SE1-205ENST00000491825 SCN11AQ9UI33 1791 aa20.09■□□□□ 0.81
CDC42SE1-205ENST00000491825 DIAPH1O60610 1272 aaKnown RBP20.09■□□□□ 0.81
CDC42SE1-205ENST00000491825 HMOX1P09601 288 aa20.09■□□□□ 0.81
CDC42SE1-205ENST00000491825 CRKLP46109 303 aaKnown RBP20.09■□□□□ 0.81
CDC42SE1-205ENST00000491825 SLC52A2Q9HAB3 445 aa20.09■□□□□ 0.81
CDC42SE1-205ENST00000491825 KIAA1551Q9HCM1 1747 aa20.09■□□□□ 0.81
CDC42SE1-205ENST00000491825 ATP10DQ9P241 1426 aa20.09■□□□□ 0.81
CDC42SE1-205ENST00000491825 MYH14Q7Z406 1995 aaKnown RBP20.08■□□□□ 0.81
CDC42SE1-205ENST00000491825 C4AP0C0L4 1744 aa20.08■□□□□ 0.81
CDC42SE1-205ENST00000491825 ADAMTS7Q9UKP4 1686 aa20.08■□□□□ 0.81
CDC42SE1-205ENST00000491825 LGR6Q9HBX8 967 aa20.08■□□□□ 0.81
CDC42SE1-205ENST00000491825 WWC3Q9ULE0 1092 aa20.08■□□□□ 0.81
CDC42SE1-205ENST00000491825 KIF13BQ9NQT8 1826 aa20.07■□□□□ 0.8
CDC42SE1-205ENST00000491825 GIGYF1O75420 1035 aaPredicted RBP20.07■□□□□ 0.8
CDC42SE1-205ENST00000491825 RNMTO43148 476 aaKnown RBP20.06■□□□□ 0.8
CDC42SE1-205ENST00000491825 ANP32CO43423 234 aa20.06■□□□□ 0.8
CDC42SE1-205ENST00000491825 RFC4P35249 363 aa20.06■□□□□ 0.8
CDC42SE1-205ENST00000491825 MTHFSDQ2M296 383 aaKnown RBP20.06■□□□□ 0.8
CDC42SE1-205ENST00000491825 KCPQ6ZWJ8 1503 aa20.05■□□□□ 0.8
CDC42SE1-205ENST00000491825 USP42Q9H9J4 1324 aaKnown RBP20.04■□□□□ 0.8
CDC42SE1-205ENST00000491825 TGFB2P61812 414 aa20.04■□□□□ 0.8
CDC42SE1-205ENST00000491825 INTS5Q6P9B9 1019 aaKnown RBP20.04■□□□□ 0.8
CDC42SE1-205ENST00000491825 DNAJC10Q8IXB1 793 aa20.03■□□□□ 0.8
CDC42SE1-205ENST00000491825 SRP68Q9UHB9 627 aaKnown RBP20.03■□□□□ 0.8
CDC42SE1-205ENST00000491825 SENP3-EIF4A1A0A087X0R7 540 aa20.02■□□□□ 0.8
CDC42SE1-205ENST00000491825 NUDCQ9Y266 331 aa20.02■□□□□ 0.8
CDC42SE1-205ENST00000491825 SLC39A6Q13433 755 aa20.01■□□□□ 0.79
CDC42SE1-205ENST00000491825 FKBP8Q14318 412 aa20.01■□□□□ 0.79
CDC42SE1-205ENST00000491825 CCDC87Q9NVE4 849 aa20.01■□□□□ 0.79
CDC42SE1-205ENST00000491825 SOS1Q07889 1333 aaPredicted RBP20.01■□□□□ 0.79
CDC42SE1-205ENST00000491825 A0A0G2JLW4 131 aa20■□□□□ 0.79
CDC42SE1-205ENST00000491825 CYP19A1P11511 503 aaPredicted RBP20■□□□□ 0.79
CDC42SE1-205ENST00000491825 DDR1Q08345 913 aa20■□□□□ 0.79
CDC42SE1-205ENST00000491825 PARP3Q9Y6F1 533 aa20■□□□□ 0.79
CDC42SE1-205ENST00000491825 DPEP1P16444 411 aa19.99■□□□□ 0.79
CDC42SE1-205ENST00000491825 U2SURPO15042 1029 aaKnown RBP19.98■□□□□ 0.79
CDC42SE1-205ENST00000491825 KCNA3P22001 575 aa19.98■□□□□ 0.79
CDC42SE1-205ENST00000491825 N4BP2Q86UW6 1770 aaPredicted RBP19.98■□□□□ 0.79
CDC42SE1-205ENST00000491825 GPBP1L1Q9HC44 474 aaPredicted RBP19.97■□□□□ 0.79
CDC42SE1-205ENST00000491825 UBR2Q8IWV8 1755 aa19.96■□□□□ 0.79
CDC42SE1-205ENST00000491825 TM4SF1P30408 202 aa19.96■□□□□ 0.79
CDC42SE1-205ENST00000491825 VSIG10Q8N0Z9 540 aa19.96■□□□□ 0.79
CDC42SE1-205ENST00000491825 BCS1LQ9Y276 419 aa19.96■□□□□ 0.79
CDC42SE1-205ENST00000491825 ZBTB1Q9Y2K1 713 aa19.96■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms