RNA–Protein interactions for RNA: ENST00000491668.1

SEC61A1-206, Transcript of Sec61 translocon alpha 1 subunit, humanhuman

TSL 4

Gene SEC61A1, Length 558 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1-206ENST00000491668 UBR3Q6ZT12 1888 aa17.22■□□□□ 0.35
SEC61A1-206ENST00000491668 HSP90AB1P08238 724 aaKnown RBP17.2■□□□□ 0.34
SEC61A1-206ENST00000491668 HMOX1P09601 288 aa17.2■□□□□ 0.34
SEC61A1-206ENST00000491668 DIAPH1O60610 1272 aaKnown RBP17.19■□□□□ 0.34
SEC61A1-206ENST00000491668 MSH5O43196 834 aa17.18■□□□□ 0.34
SEC61A1-206ENST00000491668 ATP6V1AP38606 617 aa17.18■□□□□ 0.34
SEC61A1-206ENST00000491668 MSL1Q68DK7 614 aa17.18■□□□□ 0.34
SEC61A1-206ENST00000491668 SCN11AQ9UI33 1791 aa17.17■□□□□ 0.34
SEC61A1-206ENST00000491668 ZNF831Q5JPB2 1677 aa17.17■□□□□ 0.34
SEC61A1-206ENST00000491668 POLD1P28340 1107 aa17.17■□□□□ 0.34
SEC61A1-206ENST00000491668 C1orf141Q5JVX7 400 aa17.17■□□□□ 0.34
SEC61A1-206ENST00000491668 AK7Q96M32 723 aa17.17■□□□□ 0.34
SEC61A1-206ENST00000491668 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.16■□□□□ 0.34
SEC61A1-206ENST00000491668 CABP4P57796 275 aa17.16■□□□□ 0.34
SEC61A1-206ENST00000491668 NFATC2IPQ8NCF5 419 aa17.16■□□□□ 0.34
SEC61A1-206ENST00000491668 LGR6Q9HBX8 967 aa17.16■□□□□ 0.34
SEC61A1-206ENST00000491668 PHF14O94880 888 aa17.15■□□□□ 0.34
SEC61A1-206ENST00000491668 MTHFSDQ2M296 383 aaKnown RBP17.15■□□□□ 0.34
SEC61A1-206ENST00000491668 FLAD1Q8NFF5 587 aa17.15■□□□□ 0.34
SEC61A1-206ENST00000491668 NLGN2Q8NFZ4 835 aa17.15■□□□□ 0.34
SEC61A1-206ENST00000491668 COL5A3P25940 1745 aaPredicted RBP17.15■□□□□ 0.34
SEC61A1-206ENST00000491668 ADAMTS7Q9UKP4 1686 aa17.14■□□□□ 0.33
SEC61A1-206ENST00000491668 GNPATO15228 680 aa17.14■□□□□ 0.33
SEC61A1-206ENST00000491668 HMGB2P26583 209 aaKnown RBP17.14■□□□□ 0.33
SEC61A1-206ENST00000491668 AKAP4Q5JQC9 854 aa17.14■□□□□ 0.33
SEC61A1-206ENST00000491668 RBM42Q9BTD8 480 aaKnown RBP17.14■□□□□ 0.33
SEC61A1-206ENST00000491668 SSFA2P28290 1259 aa17.13■□□□□ 0.33
SEC61A1-206ENST00000491668 MRC1P22897 1456 aa17.12■□□□□ 0.33
SEC61A1-206ENST00000491668 MYH14Q7Z406 1995 aaKnown RBP17.12■□□□□ 0.33
SEC61A1-206ENST00000491668 KLHL34Q8N239 644 aa17.12■□□□□ 0.33
SEC61A1-206ENST00000491668 VIRMAQ69YN4 1812 aaKnown RBP17.12■□□□□ 0.33
SEC61A1-206ENST00000491668 TJP1Q07157 1748 aa17.11■□□□□ 0.33
SEC61A1-206ENST00000491668 PTCD1O75127 700 aaKnown RBP17.11■□□□□ 0.33
SEC61A1-206ENST00000491668 YY1P25490 414 aa17.11■□□□□ 0.33
SEC61A1-206ENST00000491668 PPP2R1AP30153 589 aa17.11■□□□□ 0.33
SEC61A1-206ENST00000491668 DCAF8L1A6NGE4 600 aa17.1■□□□□ 0.33
SEC61A1-206ENST00000491668 U2SURPO15042 1029 aaKnown RBP17.1■□□□□ 0.33
SEC61A1-206ENST00000491668 RNMTO43148 476 aaKnown RBP17.1■□□□□ 0.33
SEC61A1-206ENST00000491668 SLC52A2Q9HAB3 445 aa17.1■□□□□ 0.33
SEC61A1-206ENST00000491668 CNTNAP4Q9C0A0 1308 aa17.1■□□□□ 0.33
SEC61A1-206ENST00000491668 CICQ96RK0 1608 aaPredicted RBP17.1■□□□□ 0.33
SEC61A1-206ENST00000491668 ZNF316A6NFI3 1004 aaPredicted RBP17.09■□□□□ 0.33
SEC61A1-206ENST00000491668 RC3H1Q5TC82 1133 aaKnown RBP17.09■□□□□ 0.33
SEC61A1-206ENST00000491668 PHACTR3Q96KR7 559 aa17.08■□□□□ 0.32
SEC61A1-206ENST00000491668 KCPQ6ZWJ8 1503 aa17.07■□□□□ 0.32
SEC61A1-206ENST00000491668 SLC39A6Q13433 755 aa17.07■□□□□ 0.32
SEC61A1-206ENST00000491668 ARHGEF1Q92888 912 aaKnown RBP17.07■□□□□ 0.32
SEC61A1-206ENST00000491668 RSPH6AQ9H0K4 717 aa17.07■□□□□ 0.32
SEC61A1-206ENST00000491668 RPS6KA4O75676 772 aa17.06■□□□□ 0.32
SEC61A1-206ENST00000491668 YBX3P16989 372 aaKnown RBP eCLIP17.06■□□□□ 0.325e-10■□□□□ 10.3
SEC61A1-206ENST00000491668 IL17REQ8NFR9 667 aa17.06■□□□□ 0.32
SEC61A1-206ENST00000491668 RTCBQ9Y3I0 505 aaKnown RBP17.06■□□□□ 0.32
SEC61A1-206ENST00000491668 C4AP0C0L4 1744 aa17.05■□□□□ 0.32
SEC61A1-206ENST00000491668 CRKLP46109 303 aaKnown RBP17.05■□□□□ 0.32
SEC61A1-206ENST00000491668 TRAPPC3LQ5T215 181 aa17.05■□□□□ 0.32
SEC61A1-206ENST00000491668 INTS5Q6P9B9 1019 aaKnown RBP17.05■□□□□ 0.32
SEC61A1-206ENST00000491668 CD2APQ9Y5K6 639 aa17.05■□□□□ 0.32
SEC61A1-206ENST00000491668 PRKAR2BP31323 418 aa17.04■□□□□ 0.32
SEC61A1-206ENST00000491668 GPR162Q16538 588 aa17.04■□□□□ 0.32
SEC61A1-206ENST00000491668 DNAJC10Q8IXB1 793 aa17.04■□□□□ 0.32
SEC61A1-206ENST00000491668 CFAP53Q96M91 514 aa17.04■□□□□ 0.32
SEC61A1-206ENST00000491668 UBR2Q8IWV8 1755 aa17.03■□□□□ 0.32
SEC61A1-206ENST00000491668 ADRA2BP18089 450 aa17.03■□□□□ 0.32
SEC61A1-206ENST00000491668 SIPA1L3O60292 1781 aaPredicted RBP17.02■□□□□ 0.32
SEC61A1-206ENST00000491668 CHD4Q14839 1912 aa17.02■□□□□ 0.32
SEC61A1-206ENST00000491668 MMP10P09238 476 aa17.02■□□□□ 0.32
SEC61A1-206ENST00000491668 GYS1P13807 737 aa17.02■□□□□ 0.32
SEC61A1-206ENST00000491668 GAS2L2Q8NHY3 880 aa17.02■□□□□ 0.32
SEC61A1-206ENST00000491668 GNAT3A8MTJ3 354 aa17.01■□□□□ 0.31
SEC61A1-206ENST00000491668 CYP19A1P11511 503 aaPredicted RBP17.01■□□□□ 0.31
SEC61A1-206ENST00000491668 PELP1Q8IZL8 1130 aaKnown RBP17.01■□□□□ 0.31
SEC61A1-206ENST00000491668 CEMIPQ8WUJ3 1361 aa17.01■□□□□ 0.31
SEC61A1-206ENST00000491668 U2AF1L5P0DN76 240 aaPredicted RBP17■□□□□ 0.31
SEC61A1-206ENST00000491668 U2AF1Q01081 240 aaKnown RBP eCLIP17■□□□□ 0.31
SEC61A1-206ENST00000491668 SRP68Q9UHB9 627 aaKnown RBP17■□□□□ 0.31
SEC61A1-206ENST00000491668 KIAA1551Q9HCM1 1747 aa16.99■□□□□ 0.31
SEC61A1-206ENST00000491668 RFC4P35249 363 aa16.99■□□□□ 0.31
SEC61A1-206ENST00000491668 NLGN1Q8N2Q7 840 aa16.99■□□□□ 0.31
SEC61A1-206ENST00000491668 CCDC87Q9NVE4 849 aa16.99■□□□□ 0.31
SEC61A1-206ENST00000491668 SOS1Q07889 1333 aaPredicted RBP16.98■□□□□ 0.31
SEC61A1-206ENST00000491668 KIF13BQ9NQT8 1826 aa16.98■□□□□ 0.31
SEC61A1-206ENST00000491668 FCHSD2O94868 740 aa16.98■□□□□ 0.31
SEC61A1-206ENST00000491668 ZNF784Q8NCA9 323 aaPredicted RBP16.98■□□□□ 0.31
SEC61A1-206ENST00000491668 NUDCQ9Y266 331 aa16.98■□□□□ 0.31
SEC61A1-206ENST00000491668 USP42Q9H9J4 1324 aaKnown RBP16.97■□□□□ 0.31
SEC61A1-206ENST00000491668 DDX10Q13206 875 aaKnown RBP16.97■□□□□ 0.31
SEC61A1-206ENST00000491668 FKBP8Q14318 412 aa16.97■□□□□ 0.31
SEC61A1-206ENST00000491668 VSIG10Q8N0Z9 540 aa16.97■□□□□ 0.31
SEC61A1-206ENST00000491668 ZNF496Q96IT1 587 aaPredicted RBP16.97■□□□□ 0.31
SEC61A1-206ENST00000491668 C10orf71Q711Q0 1435 aa16.96■□□□□ 0.31
SEC61A1-206ENST00000491668 KCNQ3O43525 872 aa16.96■□□□□ 0.31
SEC61A1-206ENST00000491668 TEFQ10587 303 aa16.96■□□□□ 0.31
SEC61A1-206ENST00000491668 ZNF790Q6PG37 636 aa16.96■□□□□ 0.31
SEC61A1-206ENST00000491668 ZBTB1Q9Y2K1 713 aa16.96■□□□□ 0.31
SEC61A1-206ENST00000491668 PXDNLA1KZ92 1463 aa16.95■□□□□ 0.3
SEC61A1-206ENST00000491668 DDR1Q08345 913 aa16.95■□□□□ 0.3
SEC61A1-206ENST00000491668 WWC3Q9ULE0 1092 aa16.95■□□□□ 0.3
SEC61A1-206ENST00000491668 MCM10Q7L590 875 aa16.94■□□□□ 0.3
SEC61A1-206ENST00000491668 HEG1Q9ULI3 1381 aa16.93■□□□□ 0.3
SEC61A1-206ENST00000491668 GRIN3BO60391 1043 aa16.93■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 390.4 ms