RNA–Protein interactions for RNA: ENST00000490516.5

EXOSC3-207, Transcript of exosome component 3, humanhuman

TSL 2

Gene EXOSC3, Length 773 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-207ENST00000490516 PIGBQ92521 554 aa19.56■□□□□ 0.72
EXOSC3-207ENST00000490516 C4AP0C0L4 1744 aa19.56■□□□□ 0.72
EXOSC3-207ENST00000490516 LOC102724428A0A0B4J2F2 783 aa19.55■□□□□ 0.72
EXOSC3-207ENST00000490516 KCNA3P22001 575 aa19.55■□□□□ 0.72
EXOSC3-207ENST00000490516 SIK1P57059 783 aa19.55■□□□□ 0.72
EXOSC3-207ENST00000490516 ITPK1Q13572 414 aa19.54■□□□□ 0.72
EXOSC3-207ENST00000490516 L3MBTL2Q969R5 705 aa19.54■□□□□ 0.72
EXOSC3-207ENST00000490516 TERF2IPQ9NYB0 399 aa19.53■□□□□ 0.72
EXOSC3-207ENST00000490516 COG3Q96JB2 828 aa19.52■□□□□ 0.72
EXOSC3-207ENST00000490516 CCDC87Q9NVE4 849 aa19.52■□□□□ 0.72
EXOSC3-207ENST00000490516 TMF1P82094 1093 aa19.51■□□□□ 0.71
EXOSC3-207ENST00000490516 RRS1Q15050 365 aaKnown RBP19.51■□□□□ 0.71
EXOSC3-207ENST00000490516 DCAF5Q96JK2 942 aa19.51■□□□□ 0.71
EXOSC3-207ENST00000490516 RTL1A6NKG5 1358 aa19.5■□□□□ 0.71
EXOSC3-207ENST00000490516 ATP6V1AP38606 617 aa19.5■□□□□ 0.71
EXOSC3-207ENST00000490516 NLGN1Q8N2Q7 840 aa19.5■□□□□ 0.71
EXOSC3-207ENST00000490516 PIM2Q9P1W9 311 aa19.49■□□□□ 0.71
EXOSC3-207ENST00000490516 ASAP1Q9ULH1 1129 aa19.49■□□□□ 0.71
EXOSC3-207ENST00000490516 TRAPPC3LQ5T215 181 aa19.48■□□□□ 0.71
EXOSC3-207ENST00000490516 SMG6Q86US8 1419 aaKnown RBP19.48■□□□□ 0.71
EXOSC3-207ENST00000490516 DALRD3Q5D0E6 543 aaKnown RBP19.47■□□□□ 0.71
EXOSC3-207ENST00000490516 PARP3Q9Y6F1 533 aa19.47■□□□□ 0.71
EXOSC3-207ENST00000490516 CCDC88AQ3V6T2 1871 aa19.46■□□□□ 0.71
EXOSC3-207ENST00000490516 RTCBQ9Y3I0 505 aaKnown RBP19.46■□□□□ 0.71
EXOSC3-207ENST00000490516 GYS1P13807 737 aa19.45■□□□□ 0.7
EXOSC3-207ENST00000490516 ARHGEF1Q92888 912 aaKnown RBP19.45■□□□□ 0.7
EXOSC3-207ENST00000490516 FOXN1O15353 648 aa19.44■□□□□ 0.7
EXOSC3-207ENST00000490516 VEGFAP15692 232 aaPredicted RBP19.44■□□□□ 0.7
EXOSC3-207ENST00000490516 NKX1-1Q15270 411 aaPredicted RBP19.44■□□□□ 0.7
EXOSC3-207ENST00000490516 TMOD3Q9NYL9 352 aa19.44■□□□□ 0.7
EXOSC3-207ENST00000490516 COL5A3P25940 1745 aaPredicted RBP19.43■□□□□ 0.7
EXOSC3-207ENST00000490516 RASSF7Q02833 373 aa19.43■□□□□ 0.7
EXOSC3-207ENST00000490516 HSP90AB2PQ58FF8 381 aa19.43■□□□□ 0.7
EXOSC3-207ENST00000490516 PCDH10Q9P2E7 1040 aa19.43■□□□□ 0.7
EXOSC3-207ENST00000490516 TIAM2Q8IVF5 1701 aa19.42■□□□□ 0.7
EXOSC3-207ENST00000490516 CHRNA5P30532 468 aa19.42■□□□□ 0.7
EXOSC3-207ENST00000490516 FAM161AQ3B820 660 aa19.42■□□□□ 0.7
EXOSC3-207ENST00000490516 MKRN1Q9UHC7 482 aaKnown RBP19.42■□□□□ 0.7
EXOSC3-207ENST00000490516 ATG3Q9NT62 314 aa19.41■□□□□ 0.7
EXOSC3-207ENST00000490516 MYH14Q7Z406 1995 aaKnown RBP19.41■□□□□ 0.7
EXOSC3-207ENST00000490516 GLTPD2A6NH11 291 aa19.4■□□□□ 0.7
EXOSC3-207ENST00000490516 RFC4P35249 363 aa19.4■□□□□ 0.7
EXOSC3-207ENST00000490516 INSRP06213 1382 aa19.4■□□□□ 0.7
EXOSC3-207ENST00000490516 KDM6AO15550 1401 aaPredicted RBP19.4■□□□□ 0.7
EXOSC3-207ENST00000490516 SLC4A9Q96Q91 983 aa19.39■□□□□ 0.69
EXOSC3-207ENST00000490516 PRDM10Q9NQV6 1147 aa19.39■□□□□ 0.69
EXOSC3-207ENST00000490516 ZC3H4Q9UPT8 1303 aaKnown RBP19.39■□□□□ 0.69
EXOSC3-207ENST00000490516 KDRP35968 1356 aa19.39■□□□□ 0.69
EXOSC3-207ENST00000490516 ADRA2BP18089 450 aa19.38■□□□□ 0.69
EXOSC3-207ENST00000490516 ZNF831Q5JPB2 1677 aa19.38■□□□□ 0.69
EXOSC3-207ENST00000490516 POTECB2RU33 542 aa19.37■□□□□ 0.69
EXOSC3-207ENST00000490516 GGNBP2Q9H3C7 697 aa19.37■□□□□ 0.69
EXOSC3-207ENST00000490516 RPS6KA4O75676 772 aa19.36■□□□□ 0.69
EXOSC3-207ENST00000490516 DDR1Q08345 913 aa19.36■□□□□ 0.69
EXOSC3-207ENST00000490516 CREBZFQ9NS37 354 aa19.36■□□□□ 0.69
EXOSC3-207ENST00000490516 SPG7Q9UQ90 795 aa19.36■□□□□ 0.69
EXOSC3-207ENST00000490516 FLT4P35916 1363 aa19.35■□□□□ 0.69
EXOSC3-207ENST00000490516 LMNB1P20700 586 aa19.35■□□□□ 0.69
EXOSC3-207ENST00000490516 RC3H1Q5TC82 1133 aaKnown RBP19.35■□□□□ 0.69
EXOSC3-207ENST00000490516 SIN3AQ96ST3 1273 aa19.35■□□□□ 0.69
EXOSC3-207ENST00000490516 RBM42Q9BTD8 480 aaKnown RBP19.35■□□□□ 0.69
EXOSC3-207ENST00000490516 FYB1O15117 783 aa19.34■□□□□ 0.69
EXOSC3-207ENST00000490516 PUS7Q96PZ0 661 aaKnown RBP19.34■□□□□ 0.69
EXOSC3-207ENST00000490516 CARD11Q9BXL7 1154 aa19.34■□□□□ 0.69
EXOSC3-207ENST00000490516 SRP68Q9UHB9 627 aaKnown RBP19.34■□□□□ 0.69
EXOSC3-207ENST00000490516 CNTNAP4Q9C0A0 1308 aa19.33■□□□□ 0.69
EXOSC3-207ENST00000490516 CTCFP49711 727 aaPredicted RBP19.33■□□□□ 0.68
EXOSC3-207ENST00000490516 FKBP8Q14318 412 aa19.33■□□□□ 0.68
EXOSC3-207ENST00000490516 ABHD8Q96I13 439 aa19.32■□□□□ 0.68
EXOSC3-207ENST00000490516 NCAPD2Q15021 1401 aa19.32■□□□□ 0.68
EXOSC3-207ENST00000490516 VIRMAQ69YN4 1812 aaKnown RBP19.32■□□□□ 0.68
EXOSC3-207ENST00000490516 KIF20BQ96Q89 1820 aa19.32■□□□□ 0.68
EXOSC3-207ENST00000490516 CNTNAP1P78357 1384 aa19.32■□□□□ 0.68
EXOSC3-207ENST00000490516 AFDNP55196 1824 aaKnown RBP19.31■□□□□ 0.68
EXOSC3-207ENST00000490516 PHKG2P15735 406 aa19.31■□□□□ 0.68
EXOSC3-207ENST00000490516 AIDAQ96BJ3 306 aa19.31■□□□□ 0.68
EXOSC3-207ENST00000490516 DLEC1Q9Y238 1755 aa19.31■□□□□ 0.68
EXOSC3-207ENST00000490516 LBX1P52954 281 aa19.3■□□□□ 0.68
EXOSC3-207ENST00000490516 NEUROD1Q13562 356 aa19.3■□□□□ 0.68
EXOSC3-207ENST00000490516 IFNL2Q8IZJ0 200 aa19.3■□□□□ 0.68
EXOSC3-207ENST00000490516 CHADLQ6NUI6 762 aa19.29■□□□□ 0.68
EXOSC3-207ENST00000490516 DICER1Q9UPY3 1922 aaKnown RBP19.29■□□□□ 0.68
EXOSC3-207ENST00000490516 USP42Q9H9J4 1324 aaKnown RBP19.28■□□□□ 0.68
EXOSC3-207ENST00000490516 POLRMTO00411 1230 aaKnown RBP19.28■□□□□ 0.68
EXOSC3-207ENST00000490516 POTEIP0CG38 1075 aa19.28■□□□□ 0.68
EXOSC3-207ENST00000490516 POTEJP0CG39 1038 aa19.28■□□□□ 0.68
EXOSC3-207ENST00000490516 EMILIN1Q9Y6C2 1016 aa19.28■□□□□ 0.68
EXOSC3-207ENST00000490516 KIF24Q5T7B8 1368 aa19.28■□□□□ 0.68
EXOSC3-207ENST00000490516 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP19.27■□□□□ 0.68
EXOSC3-207ENST00000490516 ADAMTS7Q9UKP4 1686 aa19.27■□□□□ 0.67
EXOSC3-207ENST00000490516 NFKBIEO00221 500 aa19.26■□□□□ 0.67
EXOSC3-207ENST00000490516 VEGFBP49765 207 aa19.26■□□□□ 0.67
EXOSC3-207ENST00000490516 MLLT1Q03111 559 aaPredicted RBP19.26■□□□□ 0.67
EXOSC3-207ENST00000490516 DPY19L2Q6NUT2 758 aa19.26■□□□□ 0.67
EXOSC3-207ENST00000490516 TONSLQ96HA7 1378 aa19.25■□□□□ 0.67
EXOSC3-207ENST00000490516 TM4SF1P30408 202 aa19.25■□□□□ 0.67
EXOSC3-207ENST00000490516 CRKLP46109 303 aaKnown RBP19.25■□□□□ 0.67
EXOSC3-207ENST00000490516 WBP1LQ9NX94 342 aa19.25■□□□□ 0.67
EXOSC3-207ENST00000490516 EYA1Q99502 592 aa19.24■□□□□ 0.67
EXOSC3-207ENST00000490516 TJP1Q07157 1748 aa19.23■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms