RNA–Protein interactions for RNA: ENST00000490032.5

HMGN1-218, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 405 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-218ENST00000490032 PPARGC1BQ86YN6 1023 aaKnown RBP8.47□□□□□ -1.05
HMGN1-218ENST00000490032 TMEM229AB2RXF0 380 aa8.46□□□□□ -1.06
HMGN1-218ENST00000490032 H7C1W4 665 aa8.46□□□□□ -1.06
HMGN1-218ENST00000490032 F11P03951 625 aa8.46□□□□□ -1.06
HMGN1-218ENST00000490032 GTF2E1P29083 439 aaPredicted RBP8.46□□□□□ -1.06
HMGN1-218ENST00000490032 TLR1Q15399 786 aa8.46□□□□□ -1.06
HMGN1-218ENST00000490032 C4orf17Q53FE4 359 aa8.46□□□□□ -1.06
HMGN1-218ENST00000490032 GNASQ5JWF2 1037 aa8.46□□□□□ -1.06
HMGN1-218ENST00000490032 HDGFL1Q5TGJ6 251 aa8.46□□□□□ -1.06
HMGN1-218ENST00000490032 TMEM214Q6NUQ4 689 aaKnown RBP8.46□□□□□ -1.06
HMGN1-218ENST00000490032 RIPOR1Q6ZS17 1223 aa8.46□□□□□ -1.06
HMGN1-218ENST00000490032 RHBDD1Q8TEB9 315 aa8.46□□□□□ -1.06
HMGN1-218ENST00000490032 UCN2Q96RP3 112 aa8.46□□□□□ -1.06
HMGN1-218ENST00000490032 GAS2L1Q99501 681 aaPredicted RBP8.46□□□□□ -1.06
HMGN1-218ENST00000490032 NOD1Q9Y239 953 aa8.46□□□□□ -1.06
HMGN1-218ENST00000490032 A0A1B0GTH6 734 aa8.45□□□□□ -1.06
HMGN1-218ENST00000490032 A6NJR5 290 aa8.45□□□□□ -1.06
HMGN1-218ENST00000490032 USP17L5A8MUK1 530 aa8.45□□□□□ -1.06
HMGN1-218ENST00000490032 SLURP2P0DP57 97 aa8.45□□□□□ -1.06
HMGN1-218ENST00000490032 NCOA4Q13772 614 aa8.45□□□□□ -1.06
HMGN1-218ENST00000490032 GAS6Q14393 721 aa8.45□□□□□ -1.06
HMGN1-218ENST00000490032 PLEKHM2Q8IWE5 1019 aa8.45□□□□□ -1.06
HMGN1-218ENST00000490032 SLC4A9Q96Q91 983 aa8.45□□□□□ -1.06
HMGN1-218ENST00000490032 SMTNP53814 917 aa8.44□□□□□ -1.06
HMGN1-218ENST00000490032 GTF2IP78347 998 aa8.44□□□□□ -1.06
HMGN1-218ENST00000490032 PHKA2P46019 1235 aa8.43□□□□□ -1.06
HMGN1-218ENST00000490032 MTFR1Q15390 333 aa8.43□□□□□ -1.06
HMGN1-218ENST00000490032 TBC1D9Q6ZT07 1266 aa8.43□□□□□ -1.06
HMGN1-218ENST00000490032 ATP9BO43861 1147 aa8.42□□□□□ -1.06
HMGN1-218ENST00000490032 THBS1P07996 1170 aa8.42□□□□□ -1.06
HMGN1-218ENST00000490032 FOXR1Q6PIV2 292 aa8.42□□□□□ -1.06
HMGN1-218ENST00000490032 ZNF295-AS1Q8N0V1 137 aa8.42□□□□□ -1.06
HMGN1-218ENST00000490032 DEPDC4Q8N2C3 294 aa8.42□□□□□ -1.06
HMGN1-218ENST00000490032 NUCKS1Q9H1E3 243 aaKnown RBP8.42□□□□□ -1.06
HMGN1-218ENST00000490032 USP17L3A6NCW0 530 aa8.41□□□□□ -1.06
HMGN1-218ENST00000490032 USP17L4A6NCW7 530 aa8.41□□□□□ -1.06
HMGN1-218ENST00000490032 SRSF11Q05519 484 aaKnown RBP8.41□□□□□ -1.06
HMGN1-218ENST00000490032 LBRQ14739 615 aaKnown RBP8.41□□□□□ -1.06
HMGN1-218ENST00000490032 USP17L2Q6R6M4 530 aa8.41□□□□□ -1.06
HMGN1-218ENST00000490032 USP17L1Q7RTZ2 530 aa8.41□□□□□ -1.06
HMGN1-218ENST00000490032 GTPBP3Q969Y2 492 aaKnown RBP8.41□□□□□ -1.06
HMGN1-218ENST00000490032 SERTAD1Q9UHV2 236 aa8.41□□□□□ -1.06
HMGN1-218ENST00000490032 IQSEC3Q9UPP2 1182 aaPredicted RBP8.41□□□□□ -1.06
HMGN1-218ENST00000490032 A6NJY4 79 aa8.4□□□□□ -1.06
HMGN1-218ENST00000490032 GPR25O00155 361 aa8.4□□□□□ -1.06
HMGN1-218ENST00000490032 CDK2AP1O14519 115 aa8.4□□□□□ -1.06
HMGN1-218ENST00000490032 MSX1P28360 303 aa8.4□□□□□ -1.06
HMGN1-218ENST00000490032 ZNF385CQ66K41 422 aaPredicted RBP8.4□□□□□ -1.06
HMGN1-218ENST00000490032 TRIM50Q86XT4 487 aa8.4□□□□□ -1.06
HMGN1-218ENST00000490032 GLMNQ92990 594 aa8.4□□□□□ -1.06
HMGN1-218ENST00000490032 GPAMQ9HCL2 828 aa8.4□□□□□ -1.06
HMGN1-218ENST00000490032 BACH1O14867 736 aa8.39□□□□□ -1.07
HMGN1-218ENST00000490032 ADAMTS2O95450 1211 aa8.39□□□□□ -1.07
HMGN1-218ENST00000490032 UBAP2LQ14157 1087 aaKnown RBP8.39□□□□□ -1.07
HMGN1-218ENST00000490032 TRERF1Q96PN7 1200 aa8.39□□□□□ -1.07
HMGN1-218ENST00000490032 NIFKQ9BYG3 293 aaKnown RBP8.39□□□□□ -1.07
HMGN1-218ENST00000490032 MBIPQ9NS73 344 aa8.39□□□□□ -1.07
HMGN1-218ENST00000490032 ZBTB7BO15156 539 aaPredicted RBP8.38□□□□□ -1.07
HMGN1-218ENST00000490032 PLA2G4AP47712 749 aa8.38□□□□□ -1.07
HMGN1-218ENST00000490032 WHAMMQ8TF30 809 aa8.38□□□□□ -1.07
HMGN1-218ENST00000490032 CRISPLD1Q9H336 500 aa8.38□□□□□ -1.07
HMGN1-218ENST00000490032 ZNF358Q9NW07 568 aa8.38□□□□□ -1.07
HMGN1-218ENST00000490032 ATP1A2P50993 1020 aa8.37□□□□□ -1.07
HMGN1-218ENST00000490032 EPHA4P54764 986 aa8.37□□□□□ -1.07
HMGN1-218ENST00000490032 PSME1Q06323 249 aa8.37□□□□□ -1.07
HMGN1-218ENST00000490032 SERBP1Q8NC51 408 aaKnown RBP eCLIP8.37□□□□□ -1.07
HMGN1-218ENST00000490032 C1orf216Q8TAB5 229 aa8.37□□□□□ -1.07
HMGN1-218ENST00000490032 CFHR5Q9BXR6 569 aa8.37□□□□□ -1.07
HMGN1-218ENST00000490032 USP3Q9Y6I4 520 aa8.37□□□□□ -1.07
HMGN1-218ENST00000490032 ARHGEF15O94989 841 aa8.36□□□□□ -1.07
HMGN1-218ENST00000490032 CSB-PGBD3P0DP91 1061 aa8.36□□□□□ -1.07
HMGN1-218ENST00000490032 ATP4AP20648 1035 aa8.36□□□□□ -1.07
HMGN1-218ENST00000490032 CLDN10P78369 228 aa8.36□□□□□ -1.07
HMGN1-218ENST00000490032 PGBD3Q8N328 593 aa8.36□□□□□ -1.07
HMGN1-218ENST00000490032 RUBCNLQ9H714 662 aa8.36□□□□□ -1.07
HMGN1-218ENST00000490032 SCHIP1Q9P0W5 487 aaPredicted RBP8.36□□□□□ -1.07
HMGN1-218ENST00000490032 KIAA1024Q9UPX6 916 aa8.36□□□□□ -1.07
HMGN1-218ENST00000490032 IGF1RP08069 1367 aa8.35□□□□□ -1.07
HMGN1-218ENST00000490032 FOXK2Q01167 660 aa8.35□□□□□ -1.07
HMGN1-218ENST00000490032 EFHC2Q5JST6 749 aa8.35□□□□□ -1.07
HMGN1-218ENST00000490032 LARGE2Q8N3Y3 721 aa8.35□□□□□ -1.07
HMGN1-218ENST00000490032 SVOPQ8N4V2 548 aa8.35□□□□□ -1.07
HMGN1-218ENST00000490032 TFIP11Q9UBB9 837 aaKnown RBP8.35□□□□□ -1.07
HMGN1-218ENST00000490032 MKRN1Q9UHC7 482 aaKnown RBP8.35□□□□□ -1.07
HMGN1-218ENST00000490032 MAFBQ9Y5Q3 323 aaPredicted RBP8.35□□□□□ -1.07
HMGN1-218ENST00000490032 CCDC102BQ68D86 513 aa8.34□□□□□ -1.07
HMGN1-218ENST00000490032 LYPD4Q6UWN0 246 aa8.34□□□□□ -1.07
HMGN1-218ENST00000490032 SIX5Q8N196 739 aa8.34□□□□□ -1.07
HMGN1-218ENST00000490032 OGFOD1Q8N543 542 aa8.34□□□□□ -1.07
HMGN1-218ENST00000490032 TPCN2Q8NHX9 752 aa8.34□□□□□ -1.07
HMGN1-218ENST00000490032 CALR3Q96L12 384 aaKnown RBP8.34□□□□□ -1.07
HMGN1-218ENST00000490032 NDFIP2Q9NV92 336 aa8.34□□□□□ -1.07
HMGN1-218ENST00000490032 DNAAF2Q9NVR5 837 aaKnown RBP8.34□□□□□ -1.07
HMGN1-218ENST00000490032 ZDHHC3Q9NYG2 299 aa8.34□□□□□ -1.07
HMGN1-218ENST00000490032 ADAMTS8Q9UP79 889 aa8.34□□□□□ -1.07
HMGN1-218ENST00000490032 PALM3A6NDB9 673 aaPredicted RBP8.33□□□□□ -1.08
HMGN1-218ENST00000490032 M0R2N6 131 aa8.33□□□□□ -1.08
HMGN1-218ENST00000490032 DKK1O94907 266 aa8.33□□□□□ -1.08
HMGN1-218ENST00000490032 MX2P20592 715 aa8.33□□□□□ -1.08
HMGN1-218ENST00000490032 CABP1Q9NZU7 370 aa8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 163.5 ms