RNA–Protein interactions for RNA: ENST00000489816.5

BRD9-208, Transcript of bromodomain containing 9, humanhuman

TSL 1 (best)

Gene BRD9, Length 3,170 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRD9-208ENST00000489816 NBPF4Q96M43 638 aa19.35■□□□□ 0.69
BRD9-208ENST00000489816 PSME1Q06323 249 aa19.34■□□□□ 0.69
BRD9-208ENST00000489816 FOXD4L6Q3SYB3 417 aaPredicted RBP19.34■□□□□ 0.69
BRD9-208ENST00000489816 FOXD4L3Q6VB84 417 aaPredicted RBP19.34■□□□□ 0.69
BRD9-208ENST00000489816 MPRIPQ6WCQ1 1025 aa19.34■□□□□ 0.69
BRD9-208ENST00000489816 NUTM1Q86Y26 1132 aa19.34■□□□□ 0.69
BRD9-208ENST00000489816 SSH2Q76I76 1423 aa19.34■□□□□ 0.69
BRD9-208ENST00000489816 RAB3GAP1Q15042 981 aa19.34■□□□□ 0.69
BRD9-208ENST00000489816 TPRNQ4KMQ1 711 aa19.34■□□□□ 0.69
BRD9-208ENST00000489816 ARHGEF10O15013 1369 aa19.34■□□□□ 0.69
BRD9-208ENST00000489816 DTNBO60941 627 aa19.34■□□□□ 0.69
BRD9-208ENST00000489816 CASC1Q6TDU7 716 aa19.34■□□□□ 0.69
BRD9-208ENST00000489816 DDX11L8A8MPP1 907 aa19.33■□□□□ 0.69
BRD9-208ENST00000489816 TAF7Q15545 349 aaPredicted RBP19.33■□□□□ 0.69
BRD9-208ENST00000489816 L1TD1Q5T7N2 865 aaKnown RBP19.33■□□□□ 0.69
BRD9-208ENST00000489816 GAS2L3Q86XJ1 694 aa19.33■□□□□ 0.69
BRD9-208ENST00000489816 UNC5CLQ8IV45 518 aa19.33■□□□□ 0.68
BRD9-208ENST00000489816 GBP4Q96PP9 640 aa19.33■□□□□ 0.68
BRD9-208ENST00000489816 PHF8Q9UPP1 1060 aa19.33■□□□□ 0.68
BRD9-208ENST00000489816 EIF5BO60841 1220 aaKnown RBP19.32■□□□□ 0.68
BRD9-208ENST00000489816 MCTP1Q6DN14 999 aa19.32■□□□□ 0.68
BRD9-208ENST00000489816 LRRCC1Q9C099 1032 aa19.31■□□□□ 0.68
BRD9-208ENST00000489816 USP44Q9H0E7 712 aa19.31■□□□□ 0.68
BRD9-208ENST00000489816 ANO2Q9NQ90 1003 aa19.31■□□□□ 0.68
BRD9-208ENST00000489816 NEK4P51957 841 aa19.31■□□□□ 0.68
BRD9-208ENST00000489816 RRAGDQ9NQL2 400 aaPredicted RBP19.31■□□□□ 0.68
BRD9-208ENST00000489816 RABEP1Q15276 862 aa19.3■□□□□ 0.68
BRD9-208ENST00000489816 ORAI2Q96SN7 254 aa19.3■□□□□ 0.68
BRD9-208ENST00000489816 SURF6O75683 361 aaKnown RBP19.3■□□□□ 0.68
BRD9-208ENST00000489816 UBTFL1P0CB47 393 aaPredicted RBP19.3■□□□□ 0.68
BRD9-208ENST00000489816 CHPF2Q9P2E5 772 aa19.3■□□□□ 0.68
BRD9-208ENST00000489816 KDRP35968 1356 aa19.29■□□□□ 0.68
BRD9-208ENST00000489816 NBPF7P0C2Y1 421 aaPredicted RBP19.29■□□□□ 0.68
BRD9-208ENST00000489816 UPF3BQ9BZI7 483 aaKnown RBP19.29■□□□□ 0.68
BRD9-208ENST00000489816 ERC2O15083 957 aa19.29■□□□□ 0.68
BRD9-208ENST00000489816 LARP6Q9BRS8 491 aaKnown RBP19.29■□□□□ 0.68
BRD9-208ENST00000489816 PALD1Q9ULE6 856 aa19.29■□□□□ 0.68
BRD9-208ENST00000489816 DDX49Q9Y6V7 483 aaKnown RBP19.29■□□□□ 0.68
BRD9-208ENST00000489816 NCOA3Q9Y6Q9 1424 aa19.28■□□□□ 0.68
BRD9-208ENST00000489816 MX1P20591 662 aa19.28■□□□□ 0.68
BRD9-208ENST00000489816 PRAMEF22A3QJZ6 481 aa19.28■□□□□ 0.68
BRD9-208ENST00000489816 KIF24Q5T7B8 1368 aa19.28■□□□□ 0.68
BRD9-208ENST00000489816 PI4KAP2A4QPH2 592 aa19.28■□□□□ 0.68
BRD9-208ENST00000489816 PI4KAP1Q8N8J0 262 aa19.28■□□□□ 0.68
BRD9-208ENST00000489816 DIP2AQ14689 1571 aa19.27■□□□□ 0.68
BRD9-208ENST00000489816 FSD2A1L4K1 749 aa19.27■□□□□ 0.67
BRD9-208ENST00000489816 REC8O95072 547 aa19.27■□□□□ 0.67
BRD9-208ENST00000489816 GNAI3P08754 354 aa19.27■□□□□ 0.67
BRD9-208ENST00000489816 PPP1R42Q7Z4L9 355 aa19.27■□□□□ 0.67
BRD9-208ENST00000489816 IL25Q9H293 177 aa19.27■□□□□ 0.67
BRD9-208ENST00000489816 GRPEL1Q9HAV7 217 aa19.27■□□□□ 0.67
BRD9-208ENST00000489816 MAP3K5Q99683 1374 aa19.27■□□□□ 0.67
BRD9-208ENST00000489816 BAG4O95429 457 aaKnown RBP19.26■□□□□ 0.67
BRD9-208ENST00000489816 NRKQ7Z2Y5 1582 aa19.26■□□□□ 0.67
BRD9-208ENST00000489816 TEFQ10587 303 aa19.26■□□□□ 0.67
BRD9-208ENST00000489816 SRGAP3O43295 1099 aa19.26■□□□□ 0.67
BRD9-208ENST00000489816 ATP8B2P98198 1209 aa19.26■□□□□ 0.67
BRD9-208ENST00000489816 ZNF530Q6P9A1 599 aaPredicted RBP19.26■□□□□ 0.67
BRD9-208ENST00000489816 CIZ1Q9ULV3 898 aaPredicted RBP19.25■□□□□ 0.67
BRD9-208ENST00000489816 ST18O60284 1047 aa19.25■□□□□ 0.67
BRD9-208ENST00000489816 AIMP1Q12904 312 aaKnown RBP19.24■□□□□ 0.67
BRD9-208ENST00000489816 BTBD11A6QL63 1104 aa19.23■□□□□ 0.67
BRD9-208ENST00000489816 ZC3H6P61129 1189 aaKnown RBP19.23■□□□□ 0.67
BRD9-208ENST00000489816 PRPF40AO75400 957 aaKnown RBP19.22■□□□□ 0.67
BRD9-208ENST00000489816 OS9Q13438 667 aaPredicted RBP19.22■□□□□ 0.67
BRD9-208ENST00000489816 SRCIN1Q9C0H9 1055 aa19.22■□□□□ 0.67
BRD9-208ENST00000489816 PROSER3Q2NL68 480 aa19.22■□□□□ 0.67
BRD9-208ENST00000489816 CAVIN1Q6NZI2 390 aaKnown RBP19.22■□□□□ 0.67
BRD9-208ENST00000489816 DDX17Q92841 729 aaKnown RBP19.22■□□□□ 0.67
BRD9-208ENST00000489816 GOLGA6L22H0YM25 854 aa19.22■□□□□ 0.67
BRD9-208ENST00000489816 ESYT1Q9BSJ8 1104 aa19.22■□□□□ 0.67
BRD9-208ENST00000489816 PIK3C2AO00443 1686 aa19.21■□□□□ 0.67
BRD9-208ENST00000489816 ANKLE2Q86XL3 938 aa19.21■□□□□ 0.67
BRD9-208ENST00000489816 IP6K1Q92551 441 aa19.21■□□□□ 0.67
BRD9-208ENST00000489816 MRE11P49959 708 aa19.21■□□□□ 0.67
BRD9-208ENST00000489816 EIF4A1P60842 406 aaKnown RBP19.21■□□□□ 0.67
BRD9-208ENST00000489816 DDX54Q8TDD1 881 aaKnown RBP19.21■□□□□ 0.67
BRD9-208ENST00000489816 TOPAZ1Q8N9V7 1692 aa19.21■□□□□ 0.67
BRD9-208ENST00000489816 CHMLP26374 656 aa19.2■□□□□ 0.66
BRD9-208ENST00000489816 RBM27Q9P2N5 1060 aaKnown RBP19.2■□□□□ 0.66
BRD9-208ENST00000489816 PIP4K2AP48426 406 aaPredicted RBP19.2■□□□□ 0.66
BRD9-208ENST00000489816 CWF19L2Q2TBE0 894 aaKnown RBP19.2■□□□□ 0.66
BRD9-208ENST00000489816 FAM43AQ8N2R8 423 aa19.2■□□□□ 0.66
BRD9-208ENST00000489816 PA2G4Q9UQ80 394 aaKnown RBP19.2■□□□□ 0.66
BRD9-208ENST00000489816 RGPD1P0DJD0 1748 aa19.2■□□□□ 0.66
BRD9-208ENST00000489816 SOS1Q07889 1333 aaPredicted RBP19.19■□□□□ 0.66
BRD9-208ENST00000489816 HTATSF1O43719 755 aaKnown RBP19.19■□□□□ 0.66
BRD9-208ENST00000489816 TMX3Q96JJ7 454 aa19.19■□□□□ 0.66
BRD9-208ENST00000489816 AXIN2Q9Y2T1 843 aa19.19■□□□□ 0.66
BRD9-208ENST00000489816 JARID2Q92833 1246 aaPredicted RBP19.18■□□□□ 0.66
BRD9-208ENST00000489816 GCP02774 474 aa19.18■□□□□ 0.66
BRD9-208ENST00000489816 SLC39A6Q13433 755 aa19.18■□□□□ 0.66
BRD9-208ENST00000489816 ZDHHC9Q9Y397 364 aa19.18■□□□□ 0.66
BRD9-208ENST00000489816 IBTKQ9P2D0 1353 aaPredicted RBP19.17■□□□□ 0.66
BRD9-208ENST00000489816 DNAAF4Q8WXU2 420 aa19.17■□□□□ 0.66
BRD9-208ENST00000489816 OSBPL3Q9H4L5 887 aa19.17■□□□□ 0.66
BRD9-208ENST00000489816 SPG7Q9UQ90 795 aa19.17■□□□□ 0.66
BRD9-208ENST00000489816 CWC27Q6UX04 472 aaKnown RBP19.17■□□□□ 0.66
BRD9-208ENST00000489816 RHPN1Q8TCX5 695 aa19.17■□□□□ 0.66
BRD9-208ENST00000489816 GDPD2Q9HCC8 539 aa19.16■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms