RNA–Protein interactions for RNA: ENST00000489712.6

NF1-213, Transcript of neurofibromin 1, humanhuman

TSL 4

Gene NF1, Length 543 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NF1-213ENST00000489712 CNTNAP3Q9BZ76 1288 aa7.29□□□□□ -1.24
NF1-213ENST00000489712 CUEDC1Q9NWM3 386 aaPredicted RBP7.29□□□□□ -1.24
NF1-213ENST00000489712 NOD1Q9Y239 953 aa7.29□□□□□ -1.24
NF1-213ENST00000489712 A0A1B0GTH6 734 aa7.28□□□□□ -1.24
NF1-213ENST00000489712 LORP23490 312 aaPredicted RBP7.28□□□□□ -1.24
NF1-213ENST00000489712 NCOA4Q13772 614 aa7.28□□□□□ -1.24
NF1-213ENST00000489712 ADAMTS19Q8TE59 1207 aa7.28□□□□□ -1.24
NF1-213ENST00000489712 RHBDD1Q8TEB9 315 aa7.28□□□□□ -1.24
NF1-213ENST00000489712 GTF2IP78347 998 aa7.27□□□□□ -1.25
NF1-213ENST00000489712 PSME1Q06323 249 aa7.27□□□□□ -1.25
NF1-213ENST00000489712 RNFT1Q5M7Z0 435 aa7.27□□□□□ -1.25
NF1-213ENST00000489712 FOXR1Q6PIV2 292 aa7.27□□□□□ -1.25
NF1-213ENST00000489712 F11P03951 625 aa7.26□□□□□ -1.25
NF1-213ENST00000489712 PHKA2P46019 1235 aa7.26□□□□□ -1.25
NF1-213ENST00000489712 C4orf17Q53FE4 359 aa7.26□□□□□ -1.25
NF1-213ENST00000489712 HDGFL1Q5TGJ6 251 aa7.26□□□□□ -1.25
NF1-213ENST00000489712 PPARGC1BQ86YN6 1023 aaKnown RBP7.26□□□□□ -1.25
NF1-213ENST00000489712 FNBP4Q8N3X1 1017 aaPredicted RBP7.26□□□□□ -1.25
NF1-213ENST00000489712 UCN2Q96RP3 112 aa7.26□□□□□ -1.25
NF1-213ENST00000489712 USP17L3A6NCW0 530 aa7.25□□□□□ -1.25
NF1-213ENST00000489712 USP17L4A6NCW7 530 aa7.25□□□□□ -1.25
NF1-213ENST00000489712 A6NJR5 290 aa7.25□□□□□ -1.25
NF1-213ENST00000489712 USP17L2Q6R6M4 530 aa7.25□□□□□ -1.25
NF1-213ENST00000489712 USP17L1Q7RTZ2 530 aa7.25□□□□□ -1.25
NF1-213ENST00000489712 TRIM50Q86XT4 487 aa7.25□□□□□ -1.25
NF1-213ENST00000489712 PLEKHM2Q8IWE5 1019 aa7.25□□□□□ -1.25
NF1-213ENST00000489712 DEPDC4Q8N2C3 294 aa7.25□□□□□ -1.25
NF1-213ENST00000489712 GLMNQ92990 594 aa7.25□□□□□ -1.25
NF1-213ENST00000489712 TRERF1Q96PN7 1200 aa7.25□□□□□ -1.25
NF1-213ENST00000489712 NUCKS1Q9H1E3 243 aaKnown RBP7.25□□□□□ -1.25
NF1-213ENST00000489712 GPAMQ9HCL2 828 aa7.25□□□□□ -1.25
NF1-213ENST00000489712 TMEM229AB2RXF0 380 aa7.24□□□□□ -1.25
NF1-213ENST00000489712 ATP9BO43861 1147 aa7.24□□□□□ -1.25
NF1-213ENST00000489712 PLA2G4AP47712 749 aa7.24□□□□□ -1.25
NF1-213ENST00000489712 SMTNP53814 917 aa7.24□□□□□ -1.25
NF1-213ENST00000489712 DBN1Q16643 649 aa7.24□□□□□ -1.25
NF1-213ENST00000489712 GTPBP3Q969Y2 492 aaKnown RBP7.24□□□□□ -1.25
NF1-213ENST00000489712 SERTAD1Q9UHV2 236 aa7.24□□□□□ -1.25
NF1-213ENST00000489712 PCDHGA11Q9Y5H2 935 aa7.24□□□□□ -1.25
NF1-213ENST00000489712 CSB-PGBD3P0DP91 1061 aa7.23□□□□□ -1.25
NF1-213ENST00000489712 GAS6Q14393 721 aa7.23□□□□□ -1.25
NF1-213ENST00000489712 LBRQ14739 615 aaKnown RBP7.23□□□□□ -1.25
NF1-213ENST00000489712 TBC1D9Q6ZT07 1266 aa7.23□□□□□ -1.25
NF1-213ENST00000489712 PGBD3Q8N328 593 aa7.23□□□□□ -1.25
NF1-213ENST00000489712 NIFKQ9BYG3 293 aaKnown RBP7.23□□□□□ -1.25
NF1-213ENST00000489712 GPR25O00155 361 aa7.22□□□□□ -1.25
NF1-213ENST00000489712 BACH1O14867 736 aa7.22□□□□□ -1.25
NF1-213ENST00000489712 SLURP2P0DP57 97 aa7.22□□□□□ -1.25
NF1-213ENST00000489712 ATP1A2P50993 1020 aa7.22□□□□□ -1.25
NF1-213ENST00000489712 SRSF11Q05519 484 aaKnown RBP7.22□□□□□ -1.25
NF1-213ENST00000489712 MTFR1Q15390 333 aa7.22□□□□□ -1.25
NF1-213ENST00000489712 SVOPQ8N4V2 548 aa7.22□□□□□ -1.25
NF1-213ENST00000489712 SLC4A9Q96Q91 983 aa7.22□□□□□ -1.25
NF1-213ENST00000489712 MBIPQ9NS73 344 aa7.22□□□□□ -1.25
NF1-213ENST00000489712 A6NJY4 79 aa7.21□□□□□ -1.26
NF1-213ENST00000489712 ADAMTS2O95450 1211 aa7.21□□□□□ -1.26
NF1-213ENST00000489712 MSX1P28360 303 aa7.21□□□□□ -1.26
NF1-213ENST00000489712 EFHC2Q5JST6 749 aa7.21□□□□□ -1.26
NF1-213ENST00000489712 RUBCNLQ9H714 662 aa7.21□□□□□ -1.26
NF1-213ENST00000489712 NBPF1Q3BBV0 1214 aa7.2□□□□□ -1.26
NF1-213ENST00000489712 C1orf216Q8TAB5 229 aa7.2□□□□□ -1.26
NF1-213ENST00000489712 CALR3Q96L12 384 aaKnown RBP7.2□□□□□ -1.26
NF1-213ENST00000489712 ZNF358Q9NW07 568 aa7.2□□□□□ -1.26
NF1-213ENST00000489712 PHF24Q9UPV7 400 aa7.2□□□□□ -1.26
NF1-213ENST00000489712 CDK2AP1O14519 115 aa7.19□□□□□ -1.26
NF1-213ENST00000489712 ZNF385CQ66K41 422 aaPredicted RBP7.19□□□□□ -1.26
NF1-213ENST00000489712 SERBP1Q8NC51 408 aaKnown RBP eCLIP7.19□□□□□ -1.26
NF1-213ENST00000489712 TPCN2Q8NHX9 752 aa7.19□□□□□ -1.26
NF1-213ENST00000489712 IQSEC3Q9UPP2 1182 aaPredicted RBP7.19□□□□□ -1.26
NF1-213ENST00000489712 KIAA1024Q9UPX6 916 aa7.19□□□□□ -1.26
NF1-213ENST00000489712 THBS1P07996 1170 aa7.18□□□□□ -1.26
NF1-213ENST00000489712 MX2P20592 715 aa7.18□□□□□ -1.26
NF1-213ENST00000489712 ATP4AP20648 1035 aa7.18□□□□□ -1.26
NF1-213ENST00000489712 CLDN10P78369 228 aa7.18□□□□□ -1.26
NF1-213ENST00000489712 MAP3K10Q02779 954 aa7.18□□□□□ -1.26
NF1-213ENST00000489712 CCDC102BQ68D86 513 aa7.18□□□□□ -1.26
NF1-213ENST00000489712 ZNF295-AS1Q8N0V1 137 aa7.18□□□□□ -1.26
NF1-213ENST00000489712 OGFOD1Q8N543 542 aa7.18□□□□□ -1.26
NF1-213ENST00000489712 CRISPLD1Q9H336 500 aa7.18□□□□□ -1.26
NF1-213ENST00000489712 DNAAF2Q9NVR5 837 aaKnown RBP7.18□□□□□ -1.26
NF1-213ENST00000489712 CABP1Q9NZU7 370 aa7.18□□□□□ -1.26
NF1-213ENST00000489712 MKRN1Q9UHC7 482 aaKnown RBP7.18□□□□□ -1.26
NF1-213ENST00000489712 NSFL1CQ9UNZ2 370 aaKnown RBP7.18□□□□□ -1.26
NF1-213ENST00000489712 MAFBQ9Y5Q3 323 aaPredicted RBP7.18□□□□□ -1.26
NF1-213ENST00000489712 USP3Q9Y6I4 520 aa7.18□□□□□ -1.26
NF1-213ENST00000489712 IGF1RP08069 1367 aa7.18□□□□□ -1.26
NF1-213ENST00000489712 TATP17735 454 aaPredicted RBP7.17□□□□□ -1.26
NF1-213ENST00000489712 AIDAQ96BJ3 306 aa7.17□□□□□ -1.26
NF1-213ENST00000489712 CFHR5Q9BXR6 569 aa7.17□□□□□ -1.26
NF1-213ENST00000489712 ZDHHC3Q9NYG2 299 aa7.17□□□□□ -1.26
NF1-213ENST00000489712 SCHIP1Q9P0W5 487 aaPredicted RBP7.17□□□□□ -1.26
NF1-213ENST00000489712 RBM19Q9Y4C8 960 aaKnown RBP7.17□□□□□ -1.26
NF1-213ENST00000489712 PALM3A6NDB9 673 aaPredicted RBP7.16□□□□□ -1.26
NF1-213ENST00000489712 EPHA4P54764 986 aa7.16□□□□□ -1.26
NF1-213ENST00000489712 FIGNL1Q6PIW4 674 aa7.16□□□□□ -1.26
NF1-213ENST00000489712 SLC9A9Q8IVB4 645 aa7.16□□□□□ -1.26
NF1-213ENST00000489712 SIX5Q8N196 739 aa7.16□□□□□ -1.26
NF1-213ENST00000489712 LARGE2Q8N3Y3 721 aa7.16□□□□□ -1.26
NF1-213ENST00000489712 WHAMMQ8TF30 809 aa7.16□□□□□ -1.26
NF1-213ENST00000489712 ZNF594Q96JF6 807 aaPredicted RBP7.16□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 918.4 ms