RNA–Protein interactions for RNA: ENST00000488979.6

SH3YL1-225, Transcript of SH3 and SYLF domain containing 1, humanhuman

TSL 5

Gene SH3YL1, Length 541 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3YL1-225ENST00000488979 SIK1P57059 783 aa13.76□□□□□ -0.21
SH3YL1-225ENST00000488979 TOGARAM1Q9Y4F4 1720 aa13.76□□□□□ -0.21
SH3YL1-225ENST00000488979 DPEP1P16444 411 aa13.75□□□□□ -0.21
SH3YL1-225ENST00000488979 ITPK1Q13572 414 aa13.75□□□□□ -0.21
SH3YL1-225ENST00000488979 HSP90AB2PQ58FF8 381 aa13.75□□□□□ -0.21
SH3YL1-225ENST00000488979 TIMELESSQ9UNS1 1208 aa13.75□□□□□ -0.21
SH3YL1-225ENST00000488979 UBR3Q6ZT12 1888 aa13.75□□□□□ -0.21
SH3YL1-225ENST00000488979 PXDNLA1KZ92 1463 aa13.74□□□□□ -0.21
SH3YL1-225ENST00000488979 GNPATO15228 680 aa13.74□□□□□ -0.21
SH3YL1-225ENST00000488979 FCHSD2O94868 740 aa13.74□□□□□ -0.21
SH3YL1-225ENST00000488979 C9orf131Q5VYM1 1079 aa13.74□□□□□ -0.21
SH3YL1-225ENST00000488979 C16orf71Q8IYS4 520 aaPredicted RBP13.74□□□□□ -0.21
SH3YL1-225ENST00000488979 RRAGCQ9HB90 399 aa13.74□□□□□ -0.21
SH3YL1-225ENST00000488979 ASAP1Q9ULH1 1129 aa13.74□□□□□ -0.21
SH3YL1-225ENST00000488979 CICQ96RK0 1608 aaPredicted RBP13.74□□□□□ -0.21
SH3YL1-225ENST00000488979 WDR90Q96KV7 1748 aa13.73□□□□□ -0.21
SH3YL1-225ENST00000488979 NPM3O75607 178 aaKnown RBP13.73□□□□□ -0.21
SH3YL1-225ENST00000488979 KCNA3P22001 575 aa13.73□□□□□ -0.21
SH3YL1-225ENST00000488979 ATP6V1AP38606 617 aa13.73□□□□□ -0.21
SH3YL1-225ENST00000488979 FSTL1Q12841 308 aa13.73□□□□□ -0.21
SH3YL1-225ENST00000488979 TRIM26Q12899 539 aaPredicted RBP13.72□□□□□ -0.21
SH3YL1-225ENST00000488979 NKX1-1Q15270 411 aaPredicted RBP13.72□□□□□ -0.21
SH3YL1-225ENST00000488979 N4BP2Q86UW6 1770 aaPredicted RBP13.72□□□□□ -0.21
SH3YL1-225ENST00000488979 NCAPD2Q15021 1401 aa13.72□□□□□ -0.21
SH3YL1-225ENST00000488979 NSD3Q9BZ95 1437 aa13.72□□□□□ -0.21
SH3YL1-225ENST00000488979 ITGB4P16144 1822 aa13.71□□□□□ -0.21
SH3YL1-225ENST00000488979 TRAPPC3LQ5T215 181 aa13.71□□□□□ -0.21
SH3YL1-225ENST00000488979 NLGN1Q8N2Q7 840 aa13.71□□□□□ -0.21
SH3YL1-225ENST00000488979 CARD14Q9BXL6 1004 aa13.71□□□□□ -0.21
SH3YL1-225ENST00000488979 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.71□□□□□ -0.211e-7■■□□□ 13.2
SH3YL1-225ENST00000488979 WASHC2AQ641Q2 1341 aa13.7□□□□□ -0.22
SH3YL1-225ENST00000488979 KIF20BQ96Q89 1820 aa13.7□□□□□ -0.22
SH3YL1-225ENST00000488979 ARHGEF1Q92888 912 aaKnown RBP13.7□□□□□ -0.22
SH3YL1-225ENST00000488979 MAP2P11137 1827 aaKnown RBP13.69□□□□□ -0.22
SH3YL1-225ENST00000488979 RNF39Q9H2S5 420 aa13.69□□□□□ -0.22
SH3YL1-225ENST00000488979 ATG3Q9NT62 314 aa13.69□□□□□ -0.22
SH3YL1-225ENST00000488979 SPG7Q9UQ90 795 aa13.69□□□□□ -0.22
SH3YL1-225ENST00000488979 KIAA1551Q9HCM1 1747 aa13.69□□□□□ -0.22
SH3YL1-225ENST00000488979 PLEKHG2Q9H7P9 1386 aa13.69□□□□□ -0.22
SH3YL1-225ENST00000488979 GYS1P13807 737 aa13.68□□□□□ -0.22
SH3YL1-225ENST00000488979 SLC4A9Q96Q91 983 aa13.68□□□□□ -0.22
SH3YL1-225ENST00000488979 CCDC87Q9NVE4 849 aa13.68□□□□□ -0.22
SH3YL1-225ENST00000488979 TMOD3Q9NYL9 352 aa13.68□□□□□ -0.22
SH3YL1-225ENST00000488979 RTCBQ9Y3I0 505 aaKnown RBP13.68□□□□□ -0.22
SH3YL1-225ENST00000488979 EMILIN1Q9Y6C2 1016 aa13.68□□□□□ -0.22
SH3YL1-225ENST00000488979 KIF13BQ9NQT8 1826 aa13.68□□□□□ -0.22
SH3YL1-225ENST00000488979 KCPQ6ZWJ8 1503 aa13.68□□□□□ -0.22
SH3YL1-225ENST00000488979 KDM2BQ8NHM5 1336 aa13.67□□□□□ -0.22
SH3YL1-225ENST00000488979 CLSPNQ9HAW4 1339 aa13.67□□□□□ -0.22
SH3YL1-225ENST00000488979 RNF181Q9P0P0 153 aa13.67□□□□□ -0.22
SH3YL1-225ENST00000488979 PIM2Q9P1W9 311 aa13.67□□□□□ -0.22
SH3YL1-225ENST00000488979 PARP3Q9Y6F1 533 aa13.67□□□□□ -0.22
SH3YL1-225ENST00000488979 C10orf71Q711Q0 1435 aa13.66□□□□□ -0.22
SH3YL1-225ENST00000488979 HSPA1AP0DMV8 641 aaKnown RBP13.66□□□□□ -0.22
SH3YL1-225ENST00000488979 HSPA1BP0DMV9 641 aaKnown RBP13.66□□□□□ -0.22
SH3YL1-225ENST00000488979 DCAF5Q96JK2 942 aa13.66□□□□□ -0.22
SH3YL1-225ENST00000488979 PKD1L3Q7Z443 1732 aa13.66□□□□□ -0.22
SH3YL1-225ENST00000488979 RFC4P35249 363 aa13.65□□□□□ -0.22
SH3YL1-225ENST00000488979 DALRD3Q5D0E6 543 aaKnown RBP13.65□□□□□ -0.22
SH3YL1-225ENST00000488979 SMC1BQ8NDV3 1235 aa13.65□□□□□ -0.22
SH3YL1-225ENST00000488979 EYA1Q99502 592 aa13.65□□□□□ -0.22
SH3YL1-225ENST00000488979 ANKRD26Q9UPS8 1709 aa13.64□□□□□ -0.23
SH3YL1-225ENST00000488979 PPM1GO15355 546 aaPredicted RBP13.64□□□□□ -0.23
SH3YL1-225ENST00000488979 RPS6KA4O75676 772 aa13.64□□□□□ -0.23
SH3YL1-225ENST00000488979 IFNL2Q8IZJ0 200 aa13.64□□□□□ -0.23
SH3YL1-225ENST00000488979 RBM42Q9BTD8 480 aaKnown RBP13.64□□□□□ -0.23
SH3YL1-225ENST00000488979 POLKQ9UBT6 870 aa13.64□□□□□ -0.23
SH3YL1-225ENST00000488979 PHKG2P15735 406 aa13.63□□□□□ -0.23
SH3YL1-225ENST00000488979 CHRNA5P30532 468 aa13.63□□□□□ -0.23
SH3YL1-225ENST00000488979 RC3H1Q5TC82 1133 aaKnown RBP13.63□□□□□ -0.23
SH3YL1-225ENST00000488979 BRCA1P38398 1863 aaKnown RBP13.61□□□□□ -0.23
SH3YL1-225ENST00000488979 SRP68Q9UHB9 627 aaKnown RBP13.61□□□□□ -0.23
SH3YL1-225ENST00000488979 HSP90AB1P08238 724 aaKnown RBP13.6□□□□□ -0.23
SH3YL1-225ENST00000488979 VEGFAP15692 232 aaPredicted RBP13.6□□□□□ -0.23
SH3YL1-225ENST00000488979 CACNB1Q02641 598 aaPredicted RBP13.6□□□□□ -0.23
SH3YL1-225ENST00000488979 FKBP8Q14318 412 aa13.6□□□□□ -0.23
SH3YL1-225ENST00000488979 SBF1O95248 1867 aa13.59□□□□□ -0.23
SH3YL1-225ENST00000488979 C4AP0C0L4 1744 aa13.59□□□□□ -0.23
SH3YL1-225ENST00000488979 ERVV-2B6SEH9 535 aa13.59□□□□□ -0.23
SH3YL1-225ENST00000488979 RASSF7Q02833 373 aa13.59□□□□□ -0.23
SH3YL1-225ENST00000488979 DDR1Q08345 913 aa13.59□□□□□ -0.23
SH3YL1-225ENST00000488979 EIF4A2Q14240 407 aaKnown RBP13.59□□□□□ -0.23
SH3YL1-225ENST00000488979 ARFGEF1Q9Y6D6 1849 aa13.59□□□□□ -0.23
SH3YL1-225ENST00000488979 KDRP35968 1356 aa13.58□□□□□ -0.23
SH3YL1-225ENST00000488979 GLTPD2A6NH11 291 aa13.58□□□□□ -0.24
SH3YL1-225ENST00000488979 POTECB2RU33 542 aa13.58□□□□□ -0.24
SH3YL1-225ENST00000488979 CNTNAP4Q9C0A0 1308 aa13.58□□□□□ -0.24
SH3YL1-225ENST00000488979 TM4SF1P30408 202 aa13.57□□□□□ -0.24
SH3YL1-225ENST00000488979 MYH14Q7Z406 1995 aaKnown RBP13.56□□□□□ -0.24
SH3YL1-225ENST00000488979 EIF4G2P78344 907 aaKnown RBP eCLIP13.56□□□□□ -0.24
SH3YL1-225ENST00000488979 AMOTQ4VCS5 1084 aa13.56□□□□□ -0.24
SH3YL1-225ENST00000488979 PLEKHO1Q53GL0 409 aaPredicted RBP13.56□□□□□ -0.24
SH3YL1-225ENST00000488979 POLRMTO00411 1230 aaKnown RBP13.55□□□□□ -0.24
SH3YL1-225ENST00000488979 PTCD1O75127 700 aaKnown RBP13.55□□□□□ -0.24
SH3YL1-225ENST00000488979 CRKLP46109 303 aaKnown RBP13.55□□□□□ -0.24
SH3YL1-225ENST00000488979 ZNF831Q5JPB2 1677 aa13.55□□□□□ -0.24
SH3YL1-225ENST00000488979 SLC34A2O95436 690 aa13.54□□□□□ -0.24
SH3YL1-225ENST00000488979 LMNB1P20700 586 aa13.54□□□□□ -0.24
SH3YL1-225ENST00000488979 PANK3Q9H999 370 aa13.54□□□□□ -0.24
SH3YL1-225ENST00000488979 MKRN1Q9UHC7 482 aaKnown RBP13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms