RNA–Protein interactions for RNA: ENST00000488553.3

RN7SL561P-201, Transcript of RNA, 7SL, cytoplasmic 561, pseudogene, humanhuman

BASIC

Gene RN7SL561P, Length 281 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SL561P-201ENST00000488553 XIRP1Q702N8 1843 aaKnown RBP8.47□□□□□ -1.05
RN7SL561P-201ENST00000488553 LMO7Q8WWI1 1683 aa8.47□□□□□ -1.05
RN7SL561P-201ENST00000488553 KCNQ3O43525 872 aa8.47□□□□□ -1.05
RN7SL561P-201ENST00000488553 TATP17735 454 aaPredicted RBP8.47□□□□□ -1.05
RN7SL561P-201ENST00000488553 FLIIQ13045 1269 aa8.47□□□□□ -1.05
RN7SL561P-201ENST00000488553 CHRNA2Q15822 529 aa8.47□□□□□ -1.05
RN7SL561P-201ENST00000488553 RAPGEF4Q8WZA2 1011 aa8.47□□□□□ -1.05
RN7SL561P-201ENST00000488553 DCTPP1Q9H773 170 aa8.47□□□□□ -1.05
RN7SL561P-201ENST00000488553 C1orf115Q9H7X2 142 aa8.47□□□□□ -1.05
RN7SL561P-201ENST00000488553 SPG7Q9UQ90 795 aa8.47□□□□□ -1.05
RN7SL561P-201ENST00000488553 ABCC6O95255 1503 aa8.47□□□□□ -1.05
RN7SL561P-201ENST00000488553 COL18A1P39060 1754 aa8.47□□□□□ -1.05
RN7SL561P-201ENST00000488553 F6X3S4 739 aa8.46□□□□□ -1.06
RN7SL561P-201ENST00000488553 SEC24BO95487 1268 aa8.46□□□□□ -1.06
RN7SL561P-201ENST00000488553 CSB-PGBD3P0DP91 1061 aa8.46□□□□□ -1.06
RN7SL561P-201ENST00000488553 HDGFL1Q5TGJ6 251 aa8.46□□□□□ -1.06
RN7SL561P-201ENST00000488553 NPM2Q86SE8 214 aaKnown RBP8.46□□□□□ -1.06
RN7SL561P-201ENST00000488553 ZBTB47Q9UFB7 747 aaPredicted RBP8.46□□□□□ -1.06
RN7SL561P-201ENST00000488553 GIGYF1O75420 1035 aaPredicted RBP8.45□□□□□ -1.06
RN7SL561P-201ENST00000488553 PHKG2P15735 406 aa8.45□□□□□ -1.06
RN7SL561P-201ENST00000488553 ANKRD45Q5TZF3 282 aa8.45□□□□□ -1.06
RN7SL561P-201ENST00000488553 CEP85Q6P2H3 762 aa8.45□□□□□ -1.06
RN7SL561P-201ENST00000488553 SLC4A10Q6U841 1118 aa8.45□□□□□ -1.06
RN7SL561P-201ENST00000488553 IFNL2Q8IZJ0 200 aa8.45□□□□□ -1.06
RN7SL561P-201ENST00000488553 NECTIN2Q92692 538 aa8.45□□□□□ -1.06
RN7SL561P-201ENST00000488553 MEIS3Q99687 375 aa8.45□□□□□ -1.06
RN7SL561P-201ENST00000488553 NOP58Q9Y2X3 529 aaKnown RBP8.45□□□□□ -1.06
RN7SL561P-201ENST00000488553 RGPD2P0DJD1 1756 aa8.45□□□□□ -1.06
RN7SL561P-201ENST00000488553 GNAI3P08754 354 aa8.44□□□□□ -1.06
RN7SL561P-201ENST00000488553 EIF2S2P20042 333 aaKnown RBP8.44□□□□□ -1.06
RN7SL561P-201ENST00000488553 FKBP5Q13451 457 aaPredicted RBP8.44□□□□□ -1.06
RN7SL561P-201ENST00000488553 DDRGK1Q96HY6 314 aa8.44□□□□□ -1.06
RN7SL561P-201ENST00000488553 ANP32EQ9BTT0 268 aa8.44□□□□□ -1.06
RN7SL561P-201ENST00000488553 LNPKQ9C0E8 428 aa8.44□□□□□ -1.06
RN7SL561P-201ENST00000488553 PHAXQ9H814 394 aaKnown RBP8.44□□□□□ -1.06
RN7SL561P-201ENST00000488553 SLC52A2Q9HAB3 445 aa8.44□□□□□ -1.06
RN7SL561P-201ENST00000488553 CYP27B1O15528 508 aa8.43□□□□□ -1.06
RN7SL561P-201ENST00000488553 GNAI2P04899 355 aa8.43□□□□□ -1.06
RN7SL561P-201ENST00000488553 ATP8B2P98198 1209 aa8.43□□□□□ -1.06
RN7SL561P-201ENST00000488553 DCAF5Q96JK2 942 aa8.43□□□□□ -1.06
RN7SL561P-201ENST00000488553 USP44Q9H0E7 712 aa8.43□□□□□ -1.06
RN7SL561P-201ENST00000488553 PRDM11Q9NQV5 511 aa8.43□□□□□ -1.06
RN7SL561P-201ENST00000488553 CHPF2Q9P2E5 772 aa8.43□□□□□ -1.06
RN7SL561P-201ENST00000488553 DBF4Q9UBU7 674 aaPredicted RBP8.43□□□□□ -1.06
RN7SL561P-201ENST00000488553 WDR17Q8IZU2 1322 aa8.43□□□□□ -1.06
RN7SL561P-201ENST00000488553 ATP10DQ9P241 1426 aa8.43□□□□□ -1.06
RN7SL561P-201ENST00000488553 MEGF6O75095 1541 aa8.43□□□□□ -1.06
RN7SL561P-201ENST00000488553 ADAMTS7Q9UKP4 1686 aa8.43□□□□□ -1.06
RN7SL561P-201ENST00000488553 CRYBG1Q9Y4K1 1723 aa8.43□□□□□ -1.06
RN7SL561P-201ENST00000488553 HMMRO75330 724 aa8.42□□□□□ -1.06
RN7SL561P-201ENST00000488553 HSP90AB1P08238 724 aaKnown RBP8.42□□□□□ -1.06
RN7SL561P-201ENST00000488553 ZNF790Q6PG37 636 aa8.42□□□□□ -1.06
RN7SL561P-201ENST00000488553 ILDR2Q71H61 639 aa8.42□□□□□ -1.06
RN7SL561P-201ENST00000488553 NFATC2IPQ8NCF5 419 aa8.42□□□□□ -1.06
RN7SL561P-201ENST00000488553 CARD10Q9BWT7 1032 aa8.42□□□□□ -1.06
RN7SL561P-201ENST00000488553 KDM6AO15550 1401 aaPredicted RBP8.42□□□□□ -1.06
RN7SL561P-201ENST00000488553 FAM208AQ9UK61 1670 aaKnown RBP8.42□□□□□ -1.06
RN7SL561P-201ENST00000488553 KDM3BQ7LBC6 1761 aa8.41□□□□□ -1.06
RN7SL561P-201ENST00000488553 RGPD5Q99666 1765 aa8.41□□□□□ -1.06
RN7SL561P-201ENST00000488553 BMP2KLQ5H9B9 411 aa8.41□□□□□ -1.06
RN7SL561P-201ENST00000488553 BEND3Q5T5X7 828 aa8.41□□□□□ -1.06
RN7SL561P-201ENST00000488553 TOM1L2Q6ZVM7 507 aa8.41□□□□□ -1.06
RN7SL561P-201ENST00000488553 PLEKHM2Q8IWE5 1019 aa8.41□□□□□ -1.06
RN7SL561P-201ENST00000488553 SRCIN1Q9C0H9 1055 aa8.41□□□□□ -1.06
RN7SL561P-201ENST00000488553 HYPKQ9NX55 129 aa8.41□□□□□ -1.06
RN7SL561P-201ENST00000488553 PXDNLA1KZ92 1463 aa8.4□□□□□ -1.06
RN7SL561P-201ENST00000488553 PRAMEF22A3QJZ6 481 aa8.4□□□□□ -1.06
RN7SL561P-201ENST00000488553 PI4KAP2A4QPH2 592 aa8.4□□□□□ -1.06
RN7SL561P-201ENST00000488553 SLC39A6Q13433 755 aa8.4□□□□□ -1.06
RN7SL561P-201ENST00000488553 PDIA6Q15084 440 aa8.4□□□□□ -1.06
RN7SL561P-201ENST00000488553 NKX1-1Q15270 411 aaPredicted RBP8.4□□□□□ -1.06
RN7SL561P-201ENST00000488553 KSR2Q6VAB6 950 aa8.4□□□□□ -1.06
RN7SL561P-201ENST00000488553 ERICH6Q7L0X2 663 aa8.4□□□□□ -1.06
RN7SL561P-201ENST00000488553 C16orf71Q8IYS4 520 aaPredicted RBP8.4□□□□□ -1.06
RN7SL561P-201ENST00000488553 PI4KAP1Q8N8J0 262 aa8.4□□□□□ -1.06
RN7SL561P-201ENST00000488553 ZCRB1Q8TBF4 217 aaKnown RBP8.4□□□□□ -1.06
RN7SL561P-201ENST00000488553 DNAAF4Q8WXU2 420 aa8.4□□□□□ -1.06
RN7SL561P-201ENST00000488553 DDX21Q9NR30 783 aaKnown RBP eCLIP8.4□□□□□ -1.06
RN7SL561P-201ENST00000488553 ERVV-2B6SEH9 535 aa8.39□□□□□ -1.07
RN7SL561P-201ENST00000488553 ANXA1P04083 346 aa8.39□□□□□ -1.07
RN7SL561P-201ENST00000488553 EVA1CP58658 441 aa8.39□□□□□ -1.07
RN7SL561P-201ENST00000488553 PROSER3Q2NL68 480 aa8.39□□□□□ -1.07
RN7SL561P-201ENST00000488553 ZNF496Q96IT1 587 aaPredicted RBP8.39□□□□□ -1.07
RN7SL561P-201ENST00000488553 TBC1D32Q96NH3 1257 aa8.39□□□□□ -1.07
RN7SL561P-201ENST00000488553 COL5A2P05997 1499 aaPredicted RBP8.38□□□□□ -1.07
RN7SL561P-201ENST00000488553 ADCY9O60503 1353 aa8.38□□□□□ -1.07
RN7SL561P-201ENST00000488553 ALDH1L1O75891 902 aa8.38□□□□□ -1.07
RN7SL561P-201ENST00000488553 SNRPA1P09661 255 aaKnown RBP8.38□□□□□ -1.07
RN7SL561P-201ENST00000488553 UBTFL1P0CB47 393 aaPredicted RBP8.38□□□□□ -1.07
RN7SL561P-201ENST00000488553 IL2RBP14784 551 aa8.38□□□□□ -1.07
RN7SL561P-201ENST00000488553 CABP4P57796 275 aa8.38□□□□□ -1.07
RN7SL561P-201ENST00000488553 LARP1Q6PKG0 1096 aaKnown RBP8.38□□□□□ -1.07
RN7SL561P-201ENST00000488553 SSH3Q8TE77 659 aa8.38□□□□□ -1.07
RN7SL561P-201ENST00000488553 UPF2Q9HAU5 1272 aaKnown RBP8.38□□□□□ -1.07
RN7SL561P-201ENST00000488553 LRRFIP2Q9Y608 721 aaKnown RBP8.38□□□□□ -1.07
RN7SL561P-201ENST00000488553 MRC1P22897 1456 aa8.38□□□□□ -1.07
RN7SL561P-201ENST00000488553 SIPA1L3O60292 1781 aaPredicted RBP8.38□□□□□ -1.07
RN7SL561P-201ENST00000488553 NHSL1Q5SYE7 1610 aa8.37□□□□□ -1.07
RN7SL561P-201ENST00000488553 PCDH11XQ9BZA7 1347 aa8.37□□□□□ -1.07
RN7SL561P-201ENST00000488553 PCDH11YQ9BZA8 1340 aa8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms