RNA–Protein interactions for RNA: ENST00000487997.1

PTBP3-208, Transcript of polypyrimidine tract binding protein 3, human

TSL 3

Gene PTBP3, Length 389 nt, Biotype processed transcript, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTBP3-208	ENST00000487997	NBPF4	Q96M43	638 aa		12.89	□□□□□ -0.35
PTBP3-208	ENST00000487997	OVOS2	A0A0G2JMS6	1433 aa		12.88	□□□□□ -0.35
PTBP3-208	ENST00000487997	USHBP1	Q8N6Y0	703 aa		12.88	□□□□□ -0.35
PTBP3-208	ENST00000487997	OCEL1	Q9H607	264 aa		12.88	□□□□□ -0.35
PTBP3-208	ENST00000487997	TNS1	Q9HBL0	1735 aa	Known RBP	12.88	□□□□□ -0.35
PTBP3-208	ENST00000487997	TNS2	Q63HR2	1409 aa		12.88	□□□□□ -0.35
PTBP3-208	ENST00000487997	TAT	P17735	454 aa	Predicted RBP	12.87	□□□□□ -0.35
PTBP3-208	ENST00000487997	TRIM37	O94972	964 aa		12.86	□□□□□ -0.35
PTBP3-208	ENST00000487997	BAG6	P46379	1132 aa		12.86	□□□□□ -0.35
PTBP3-208	ENST00000487997	MTHFS	P49914	203 aa		12.86	□□□□□ -0.35
PTBP3-208	ENST00000487997	DDX10	Q13206	875 aa	Known RBP	12.86	□□□□□ -0.35
PTBP3-208	ENST00000487997	SHANK3	Q9BYB0	1731 aa		12.85	□□□□□ -0.35
PTBP3-208	ENST00000487997	EIF4A2	Q14240	407 aa	Known RBP	12.85	□□□□□ -0.35
PTBP3-208	ENST00000487997	MARCH10	Q8NA82	808 aa	Predicted RBP	12.85	□□□□□ -0.35
PTBP3-208	ENST00000487997	ZCRB1	Q8TBF4	217 aa	Known RBP	12.85	□□□□□ -0.35
PTBP3-208	ENST00000487997	DDX54	Q8TDD1	881 aa	Known RBP	12.85	□□□□□ -0.35
PTBP3-208	ENST00000487997	EYA1	Q99502	592 aa		12.85	□□□□□ -0.35
PTBP3-208	ENST00000487997	PDCD7	Q8N8D1	485 aa	Known RBP	12.84	□□□□□ -0.35
PTBP3-208	ENST00000487997	MEGF6	O75095	1541 aa		12.83	□□□□□ -0.35
PTBP3-208	ENST00000487997	PKD1L3	Q7Z443	1732 aa		12.83	□□□□□ -0.36
PTBP3-208	ENST00000487997	GOLGA2	Q08379	1002 aa		12.83	□□□□□ -0.36
PTBP3-208	ENST00000487997	RNF25	Q96BH1	459 aa	Predicted RBP	12.83	□□□□□ -0.36
PTBP3-208	ENST00000487997	CFAP53	Q96M91	514 aa		12.83	□□□□□ -0.36
PTBP3-208	ENST00000487997	APBA3	O96018	575 aa		12.82	□□□□□ -0.36
PTBP3-208	ENST00000487997	MKRN3	Q13064	507 aa	Known RBP	12.82	□□□□□ -0.36
PTBP3-208	ENST00000487997	NHS	Q6T4R5	1651 aa		12.82	□□□□□ -0.36
PTBP3-208	ENST00000487997	DOT1L	Q8TEK3	1739 aa		12.82	□□□□□ -0.36
PTBP3-208	ENST00000487997	DIAPH1	O60610	1272 aa	Known RBP	12.81	□□□□□ -0.36
PTBP3-208	ENST00000487997	DEFB132	Q7Z7B7	95 aa		12.81	□□□□□ -0.36
PTBP3-208	ENST00000487997	SPG7	Q9UQ90	795 aa		12.81	□□□□□ -0.36
PTBP3-208	ENST00000487997	IGSF1	Q8N6C5	1336 aa		12.81	□□□□□ -0.36
PTBP3-208	ENST00000487997	PCDH11X	Q9BZA7	1347 aa		12.81	□□□□□ -0.36
PTBP3-208	ENST00000487997	PCDH11Y	Q9BZA8	1340 aa		12.81	□□□□□ -0.36
PTBP3-208	ENST00000487997	BTAF1	O14981	1849 aa		12.81	□□□□□ -0.36
PTBP3-208	ENST00000487997	BCL9	O00512	1426 aa		12.8	□□□□□ -0.36
PTBP3-208	ENST00000487997	NCAPD2	Q15021	1401 aa		12.8	□□□□□ -0.36
PTBP3-208	ENST00000487997	ZNF316	A6NFI3	1004 aa	Predicted RBP	12.8	□□□□□ -0.36
PTBP3-208	ENST00000487997	BCL11B	Q9C0K0	894 aa	Predicted RBP	12.8	□□□□□ -0.36
PTBP3-208	ENST00000487997	ITGB4	P16144	1822 aa		12.8	□□□□□ -0.36
PTBP3-208	ENST00000487997	VIRMA	Q69YN4	1812 aa	Known RBP	12.8	□□□□□ -0.36
PTBP3-208	ENST00000487997	RGPD3	A6NKT7	1758 aa	Predicted RBP	12.79	□□□□□ -0.36
PTBP3-208	ENST00000487997	RGPD4	Q7Z3J3	1758 aa		12.79	□□□□□ -0.36
PTBP3-208	ENST00000487997	PPP2R1A	P30153	589 aa		12.79	□□□□□ -0.36
PTBP3-208	ENST00000487997	IL13	P35225	146 aa		12.79	□□□□□ -0.36
PTBP3-208	ENST00000487997	EN1	Q05925	392 aa	Predicted RBP	12.79	□□□□□ -0.36
PTBP3-208	ENST00000487997	SULT6B1	Q6IMI4	303 aa		12.79	□□□□□ -0.36
PTBP3-208	ENST00000487997	ACSBG1	Q96GR2	724 aa		12.79	□□□□□ -0.36
PTBP3-208	ENST00000487997	U2SURP	O15042	1029 aa	Known RBP	12.78	□□□□□ -0.36
PTBP3-208	ENST00000487997	BCLAF1	Q9NYF8	920 aa	Known RBP eCLIP	12.78	□□□□□ -0.36	4e-6	■■■□□ 16.8
PTBP3-208	ENST00000487997	NUDC	Q9Y266	331 aa		12.78	□□□□□ -0.36
PTBP3-208	ENST00000487997	RALBP1	Q15311	655 aa		12.77	□□□□□ -0.37
PTBP3-208	ENST00000487997	PLEKHO1	Q53GL0	409 aa	Predicted RBP	12.77	□□□□□ -0.37
PTBP3-208	ENST00000487997	SYTL4	Q96C24	671 aa	Predicted RBP	12.77	□□□□□ -0.37
PTBP3-208	ENST00000487997	PLEKHG2	Q9H7P9	1386 aa		12.77	□□□□□ -0.37
PTBP3-208	ENST00000487997	RREB1	Q92766	1687 aa		12.77	□□□□□ -0.37
PTBP3-208	ENST00000487997	AMOT	Q4VCS5	1084 aa		12.76	□□□□□ -0.37
PTBP3-208	ENST00000487997	IFNL2	Q8IZJ0	200 aa		12.76	□□□□□ -0.37
PTBP3-208	ENST00000487997	PARD3	Q8TEW0	1356 aa		12.76	□□□□□ -0.37
PTBP3-208	ENST00000487997	RIOK3	O14730	519 aa	Known RBP	12.75	□□□□□ -0.37
PTBP3-208	ENST00000487997	PLSCR1	O15162	318 aa		12.75	□□□□□ -0.37
PTBP3-208	ENST00000487997	KCNQ2	O43526	872 aa		12.75	□□□□□ -0.37
PTBP3-208	ENST00000487997	HMOX1	P09601	288 aa		12.75	□□□□□ -0.37
PTBP3-208	ENST00000487997	EZH2	Q15910	746 aa	Known RBP	12.75	□□□□□ -0.37
PTBP3-208	ENST00000487997	LCE2D	Q5TA82	110 aa	Predicted RBP	12.75	□□□□□ -0.37
PTBP3-208	ENST00000487997	AEBP1	Q8IUX7	1158 aa		12.75	□□□□□ -0.37
PTBP3-208	ENST00000487997	NUP188	Q5SRE5	1749 aa		12.74	□□□□□ -0.37
PTBP3-208	ENST00000487997	COL3A1	P02461	1466 aa	Predicted RBP	12.74	□□□□□ -0.37
PTBP3-208	ENST00000487997	KDR	P35968	1356 aa		12.74	□□□□□ -0.37
PTBP3-208	ENST00000487997	CYP27B1	O15528	508 aa		12.74	□□□□□ -0.37
PTBP3-208	ENST00000487997	PRIM1	P49642	420 aa	Known RBP	12.74	□□□□□ -0.37
PTBP3-208	ENST00000487997	C1orf141	Q5JVX7	400 aa		12.74	□□□□□ -0.37
PTBP3-208	ENST00000487997	CAMKK2	Q96RR4	588 aa		12.74	□□□□□ -0.37
PTBP3-208	ENST00000487997	HSP90AB1	P08238	724 aa	Known RBP	12.73	□□□□□ -0.37
PTBP3-208	ENST00000487997	ZNF530	Q6P9A1	599 aa	Predicted RBP	12.73	□□□□□ -0.37
PTBP3-208	ENST00000487997	PTF1A	Q7RTS3	328 aa		12.73	□□□□□ -0.37
PTBP3-208	ENST00000487997	SLAIN1	Q8ND83	568 aa		12.73	□□□□□ -0.37
PTBP3-208	ENST00000487997	SCN11A	Q9UI33	1791 aa		12.73	□□□□□ -0.37
PTBP3-208	ENST00000487997	TOGARAM1	Q9Y4F4	1720 aa		12.73	□□□□□ -0.37
PTBP3-208	ENST00000487997	PHKG2	P15735	406 aa		12.72	□□□□□ -0.37
PTBP3-208	ENST00000487997	NBPF14	Q5TI25	921 aa		12.72	□□□□□ -0.37
PTBP3-208	ENST00000487997	LY75	O60449	1722 aa		12.71	□□□□□ -0.37
PTBP3-208	ENST00000487997	MYBBP1A	Q9BQG0	1328 aa	Known RBP	12.71	□□□□□ -0.37
PTBP3-208	ENST00000487997	U2AF1L5	P0DN76	240 aa	Predicted RBP	12.71	□□□□□ -0.37
PTBP3-208	ENST00000487997	U2AF1	Q01081	240 aa	Known RBP eCLIP	12.71	□□□□□ -0.37
PTBP3-208	ENST00000487997	NKX1-1	Q15270	411 aa	Predicted RBP	12.71	□□□□□ -0.37
PTBP3-208	ENST00000487997	NEFM	P07197	916 aa		12.7	□□□□□ -0.38
PTBP3-208	ENST00000487997	DPY19L2	Q6NUT2	758 aa		12.7	□□□□□ -0.38
PTBP3-208	ENST00000487997	MPRIP	Q6WCQ1	1025 aa		12.7	□□□□□ -0.38
PTBP3-208	ENST00000487997	FAM163A	Q96GL9	167 aa	Predicted RBP	12.7	□□□□□ -0.38
PTBP3-208	ENST00000487997	ZFP91-CNTF	A0A0A6YYC7	529 aa	Predicted RBP	12.69	□□□□□ -0.38
PTBP3-208	ENST00000487997	TXNRD1	Q16881	649 aa		12.69	□□□□□ -0.38
PTBP3-208	ENST00000487997	EFCAB3	Q8N7B9	438 aa		12.69	□□□□□ -0.38
PTBP3-208	ENST00000487997	DCAF5	Q96JK2	942 aa		12.69	□□□□□ -0.38
PTBP3-208	ENST00000487997	ZFP91	Q96JP5	570 aa	Predicted RBP	12.69	□□□□□ -0.38
PTBP3-208	ENST00000487997	TMOD3	Q9NYL9	352 aa		12.69	□□□□□ -0.38
PTBP3-208	ENST00000487997	POTEM	A6NI47	508 aa		12.68	□□□□□ -0.38
PTBP3-208	ENST00000487997	AKAP4	Q5JQC9	854 aa		12.68	□□□□□ -0.38
PTBP3-208	ENST00000487997	PNN	Q9H307	717 aa	Known RBP	12.68	□□□□□ -0.38
PTBP3-208	ENST00000487997	PRKRIP1	Q9H875	184 aa	Predicted RBP	12.68	□□□□□ -0.38
PTBP3-208	ENST00000487997	DLG5	Q8TDM6	1919 aa		12.68	□□□□□ -0.38

Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms