RNA–Protein interactions for RNA: ENST00000487169.5

HDLBP-241, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 4,339 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-241ENST00000487169 GPTP24298 496 aa15.81■□□□□ 0.12
HDLBP-241ENST00000487169 CT47A1Q5JQC4 288 aaPredicted RBP15.81■□□□□ 0.12
HDLBP-241ENST00000487169 ANXA1P04083 346 aa15.8■□□□□ 0.12
HDLBP-241ENST00000487169 HSP90AA2PQ14568 343 aaPredicted RBP15.8■□□□□ 0.12
HDLBP-241ENST00000487169 NSD2O96028 1365 aa15.8■□□□□ 0.12
HDLBP-241ENST00000487169 GPS2Q13227 327 aa15.8■□□□□ 0.12
HDLBP-241ENST00000487169 ZSCAN31Q96LW9 406 aaPredicted RBP15.8■□□□□ 0.12
HDLBP-241ENST00000487169 NUP153P49790 1475 aaKnown RBP15.8■□□□□ 0.12
HDLBP-241ENST00000487169 PI4KAP2A4QPH2 592 aa15.8■□□□□ 0.12
HDLBP-241ENST00000487169 SOGA3Q5TF21 947 aa15.8■□□□□ 0.12
HDLBP-241ENST00000487169 PI4KAP1Q8N8J0 262 aa15.8■□□□□ 0.12
HDLBP-241ENST00000487169 ANKRD24Q8TF21 1146 aa15.8■□□□□ 0.12
HDLBP-241ENST00000487169 RNF123Q5XPI4 1314 aa15.79■□□□□ 0.12
HDLBP-241ENST00000487169 ASXL2Q76L83 1435 aa15.79■□□□□ 0.12
HDLBP-241ENST00000487169 KRT18P05783 430 aaKnown RBP15.79■□□□□ 0.12
HDLBP-241ENST00000487169 IMMTQ16891 758 aaKnown RBP15.79■□□□□ 0.12
HDLBP-241ENST00000487169 WDR62O43379 1518 aa15.79■□□□□ 0.12
HDLBP-241ENST00000487169 CASTP20810 708 aaKnown RBP15.79■□□□□ 0.12
HDLBP-241ENST00000487169 BRPF1P55201 1214 aaPredicted RBP15.79■□□□□ 0.12
HDLBP-241ENST00000487169 SMC2O95347 1197 aa15.79■□□□□ 0.12
HDLBP-241ENST00000487169 HSP90AB3PQ58FF7 597 aa15.79■□□□□ 0.12
HDLBP-241ENST00000487169 DDX11Q96FC9 970 aa15.79■□□□□ 0.12
HDLBP-241ENST00000487169 U3KPZ7 1027 aaPredicted RBP15.79■□□□□ 0.12
HDLBP-241ENST00000487169 DCAF8L1A6NGE4 600 aa15.78■□□□□ 0.12
HDLBP-241ENST00000487169 MNS1Q8NEH6 495 aa15.78■□□□□ 0.12
HDLBP-241ENST00000487169 MBIPQ9NS73 344 aa15.78■□□□□ 0.12
HDLBP-241ENST00000487169 DMRT2Q9Y5R5 561 aa15.78■□□□□ 0.12
HDLBP-241ENST00000487169 CDKL5O76039 1030 aa15.78■□□□□ 0.12
HDLBP-241ENST00000487169 TSPY26PQ9H489 355 aa15.78■□□□□ 0.12
HDLBP-241ENST00000487169 ATP5J2-PTCD1G3V325 749 aa15.78■□□□□ 0.12
HDLBP-241ENST00000487169 HMGB2P26583 209 aaKnown RBP15.78■□□□□ 0.12
HDLBP-241ENST00000487169 FILIP1LQ4L180 1135 aa15.78■□□□□ 0.12
HDLBP-241ENST00000487169 CAVIN4Q5BKX8 364 aa15.78■□□□□ 0.12
HDLBP-241ENST00000487169 FERMT3Q86UX7 667 aa15.78■□□□□ 0.12
HDLBP-241ENST00000487169 FAM13BQ9NYF5 915 aa15.78■□□□□ 0.12
HDLBP-241ENST00000487169 PBRM1Q86U86 1689 aa15.78■□□□□ 0.12
HDLBP-241ENST00000487169 LRPPRCP42704 1394 aaKnown RBP15.77■□□□□ 0.12
HDLBP-241ENST00000487169 UBE3BQ7Z3V4 1068 aa15.77■□□□□ 0.12
HDLBP-241ENST00000487169 PRPF40BQ6NWY9 871 aaKnown RBP15.77■□□□□ 0.11
HDLBP-241ENST00000487169 CIZ1Q9ULV3 898 aaPredicted RBP15.77■□□□□ 0.11
HDLBP-241ENST00000487169 MINDY4BA8MYZ0 360 aa15.77■□□□□ 0.11
HDLBP-241ENST00000487169 PIBF1Q8WXW3 757 aa15.77■□□□□ 0.11
HDLBP-241ENST00000487169 PKNOX2Q96KN3 472 aa15.77■□□□□ 0.11
HDLBP-241ENST00000487169 TNMDQ9H2S6 317 aa15.77■□□□□ 0.11
HDLBP-241ENST00000487169 PTPRCP08575 1304 aa15.76■□□□□ 0.11
HDLBP-241ENST00000487169 UHRF1BP1LA0JNW5 1464 aa15.76■□□□□ 0.11
HDLBP-241ENST00000487169 TNNT3P45378 269 aaPredicted RBP15.76■□□□□ 0.11
HDLBP-241ENST00000487169 PDZRN4Q6ZMN7 1036 aaPredicted RBP15.76■□□□□ 0.11
HDLBP-241ENST00000487169 ZHX3Q9H4I2 956 aa15.76■□□□□ 0.11
HDLBP-241ENST00000487169 CCDC192P0DO97 292 aa15.76■□□□□ 0.11
HDLBP-241ENST00000487169 TTLL5Q6EMB2 1281 aa15.75■□□□□ 0.11
HDLBP-241ENST00000487169 CNKSR2Q8WXI2 1034 aa15.75■□□□□ 0.11
HDLBP-241ENST00000487169 SPATA32Q96LK8 384 aa15.75■□□□□ 0.11
HDLBP-241ENST00000487169 MAP3K2Q9Y2U5 619 aa15.75■□□□□ 0.11
HDLBP-241ENST00000487169 A2MP01023 1474 aa15.75■□□□□ 0.11
HDLBP-241ENST00000487169 ZFYVE27Q5T4F4 411 aa15.75■□□□□ 0.11
HDLBP-241ENST00000487169 LDHAL6AQ6ZMR3 332 aa15.75■□□□□ 0.11
HDLBP-241ENST00000487169 BCL11BQ9C0K0 894 aaPredicted RBP15.75■□□□□ 0.11
HDLBP-241ENST00000487169 NAPBQ9H115 298 aa15.75■□□□□ 0.11
HDLBP-241ENST00000487169 CCDC39Q9UFE4 941 aa15.75■□□□□ 0.11
HDLBP-241ENST00000487169 CFAP45Q9UL16 551 aa15.75■□□□□ 0.11
HDLBP-241ENST00000487169 ANKRD36BQ8N2N9 1353 aa15.75■□□□□ 0.11
HDLBP-241ENST00000487169 MCM4P33991 863 aa15.75■□□□□ 0.11
HDLBP-241ENST00000487169 ODF2Q5BJF6 829 aa15.75■□□□□ 0.11
HDLBP-241ENST00000487169 NOL7Q9UMY1 257 aaKnown RBP15.75■□□□□ 0.11
HDLBP-241ENST00000487169 DISP1Q96F81 1524 aa15.75■□□□□ 0.11
HDLBP-241ENST00000487169 TMOD2Q9NZR1 351 aa15.75■□□□□ 0.11
HDLBP-241ENST00000487169 ANKIB1Q9P2G1 1089 aa15.74■□□□□ 0.11
HDLBP-241ENST00000487169 MAP3K12Q12852 859 aa15.74■□□□□ 0.11
HDLBP-241ENST00000487169 TEX13AQ9BXU3 409 aaPredicted RBP15.74■□□□□ 0.11
HDLBP-241ENST00000487169 MAGEC2Q9UBF1 373 aaPredicted RBP15.74■□□□□ 0.11
HDLBP-241ENST00000487169 ANKRD18BA2A2Z9 1011 aa15.73■□□□□ 0.11
HDLBP-241ENST00000487169 MPNDQ8N594 471 aa15.73■□□□□ 0.11
HDLBP-241ENST00000487169 ECHDC1Q9NTX5 307 aa15.73■□□□□ 0.11
HDLBP-241ENST00000487169 KIAA0556O60303 1618 aa15.73■□□□□ 0.11
HDLBP-241ENST00000487169 SNRPA1P09661 255 aaKnown RBP15.73■□□□□ 0.11
HDLBP-241ENST00000487169 PIP4K2AP48426 406 aaPredicted RBP15.73■□□□□ 0.11
HDLBP-241ENST00000487169 PPP1R42Q7Z4L9 355 aa15.73■□□□□ 0.11
HDLBP-241ENST00000487169 CCDC83Q8IWF9 413 aa15.73■□□□□ 0.11
HDLBP-241ENST00000487169 SSBP05455 408 aaKnown RBP eCLIP15.73■□□□□ 0.11
HDLBP-241ENST00000487169 TMEM132AQ24JP5 1023 aa15.73■□□□□ 0.11
HDLBP-241ENST00000487169 NPHP3Q7Z494 1330 aa15.73■□□□□ 0.11
HDLBP-241ENST00000487169 TRAPPC8Q9Y2L5 1435 aa15.73■□□□□ 0.11
HDLBP-241ENST00000487169 TTC21AQ8NDW8 1320 aa15.72■□□□□ 0.11
HDLBP-241ENST00000487169 RAPGEF6Q8TEU7 1601 aa15.72■□□□□ 0.11
HDLBP-241ENST00000487169 SERPINC1P01008 464 aa15.72■□□□□ 0.11
HDLBP-241ENST00000487169 USP5P45974 858 aa15.72■□□□□ 0.11
HDLBP-241ENST00000487169 ANKRD13DQ6ZTN6 518 aa15.72■□□□□ 0.11
HDLBP-241ENST00000487169 SPC24Q8NBT2 197 aa15.72■□□□□ 0.11
HDLBP-241ENST00000487169 SNRKQ9NRH2 765 aa15.72■□□□□ 0.11
HDLBP-241ENST00000487169 ZRANB1Q9UGI0 708 aa15.72■□□□□ 0.11
HDLBP-241ENST00000487169 IL16Q14005 1332 aa15.72■□□□□ 0.11
HDLBP-241ENST00000487169 MKNK2Q9HBH9 465 aa15.72■□□□□ 0.11
HDLBP-241ENST00000487169 CCDC82Q8N4S0 544 aa15.71■□□□□ 0.11
HDLBP-241ENST00000487169 JARID2Q92833 1246 aaPredicted RBP15.71■□□□□ 0.11
HDLBP-241ENST00000487169 POLR3DP05423 398 aaPredicted RBP15.71■□□□□ 0.11
HDLBP-241ENST00000487169 DZIP1Q86YF9 867 aaKnown RBP15.71■□□□□ 0.11
HDLBP-241ENST00000487169 PDIA4P13667 645 aaKnown RBP15.71■□□□□ 0.1
HDLBP-241ENST00000487169 STIM1Q13586 685 aa15.7■□□□□ 0.1
HDLBP-241ENST00000487169 CWC25Q9NXE8 425 aaPredicted RBP15.7■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms