RNA–Protein interactions for RNA: ENST00000486810.5

COPS3-209, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 3

Gene COPS3, Length 938 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-209ENST00000486810 SERTAD1Q9UHV2 236 aa9.15□□□□□ -0.94
COPS3-209ENST00000486810 RHOQP17081 205 aa9.14□□□□□ -0.95
COPS3-209ENST00000486810 RASA1P20936 1047 aa9.14□□□□□ -0.95
COPS3-209ENST00000486810 PTK7Q13308 1070 aa9.14□□□□□ -0.95
COPS3-209ENST00000486810 LCE2CQ5TA81 110 aa9.14□□□□□ -0.95
COPS3-209ENST00000486810 CCDC102BQ68D86 513 aa9.14□□□□□ -0.95
COPS3-209ENST00000486810 SIX5Q8N196 739 aa9.14□□□□□ -0.95
COPS3-209ENST00000486810 LARGE2Q8N3Y3 721 aa9.14□□□□□ -0.95
COPS3-209ENST00000486810 TPCN2Q8NHX9 752 aa9.14□□□□□ -0.95
COPS3-209ENST00000486810 ZNF594Q96JF6 807 aaPredicted RBP9.14□□□□□ -0.95
COPS3-209ENST00000486810 VRTNQ9H8Y1 702 aa9.14□□□□□ -0.95
COPS3-209ENST00000486810 USP3Q9Y6I4 520 aa9.14□□□□□ -0.95
COPS3-209ENST00000486810 SLC35F4A4IF30 521 aa9.13□□□□□ -0.95
COPS3-209ENST00000486810 ATP1A2P50993 1020 aa9.13□□□□□ -0.95
COPS3-209ENST00000486810 PSME1Q06323 249 aa9.13□□□□□ -0.95
COPS3-209ENST00000486810 POU4F2Q12837 409 aa9.13□□□□□ -0.95
COPS3-209ENST00000486810 ZNF295-AS1Q8N0V1 137 aa9.13□□□□□ -0.95
COPS3-209ENST00000486810 SERPINA10Q9UK55 444 aa9.13□□□□□ -0.95
COPS3-209ENST00000486810 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP9.12□□□□□ -0.95
COPS3-209ENST00000486810 SPATA31C2B4DYI2 1134 aa9.12□□□□□ -0.95
COPS3-209ENST00000486810 VEGFBP49765 207 aa9.12□□□□□ -0.95
COPS3-209ENST00000486810 SMTNP53814 917 aa9.12□□□□□ -0.95
COPS3-209ENST00000486810 EPHA4P54764 986 aa9.12□□□□□ -0.95
COPS3-209ENST00000486810 MTFR1Q15390 333 aa9.12□□□□□ -0.95
COPS3-209ENST00000486810 TLR1Q15399 786 aa9.12□□□□□ -0.95
COPS3-209ENST00000486810 SLC27A3Q5K4L6 730 aa9.12□□□□□ -0.95
COPS3-209ENST00000486810 CCDC97Q96F63 343 aaPredicted RBP9.12□□□□□ -0.95
COPS3-209ENST00000486810 ZSCAN10Q96SZ4 725 aaPredicted RBP9.12□□□□□ -0.95
COPS3-209ENST00000486810 NXF1Q9UBU9 619 aaKnown RBP9.12□□□□□ -0.95
COPS3-209ENST00000486810 FAM196BA6NMK8 535 aa9.11□□□□□ -0.95
COPS3-209ENST00000486810 SFI1A8K8P3 1242 aa9.11□□□□□ -0.95
COPS3-209ENST00000486810 USP17L15C9J2P7 530 aa9.11□□□□□ -0.95
COPS3-209ENST00000486810 USP17L10C9JJH3 530 aa9.11□□□□□ -0.95
COPS3-209ENST00000486810 USP17L13C9JLJ4 530 aa9.11□□□□□ -0.95
COPS3-209ENST00000486810 USP17L12C9JPN9 530 aa9.11□□□□□ -0.95
COPS3-209ENST00000486810 USP17L11C9JVI0 530 aa9.11□□□□□ -0.95
COPS3-209ENST00000486810 USP17L21D6R901 530 aa9.11□□□□□ -0.95
COPS3-209ENST00000486810 USP17L18D6R9N7 530 aa9.11□□□□□ -0.95
COPS3-209ENST00000486810 USP17L22D6RA61 530 aa9.11□□□□□ -0.95
COPS3-209ENST00000486810 USP17L17D6RBQ6 530 aa9.11□□□□□ -0.95
COPS3-209ENST00000486810 USP17L19D6RCP7 530 aa9.11□□□□□ -0.95
COPS3-209ENST00000486810 USP17L20D6RJB6 530 aa9.11□□□□□ -0.95
COPS3-209ENST00000486810 USP17L24Q0WX57 530 aa9.11□□□□□ -0.95
COPS3-209ENST00000486810 NFX1Q12986 1120 aaKnown RBP9.11□□□□□ -0.95
COPS3-209ENST00000486810 NBPF10Q6P3W6 841 aaKnown RBP9.11□□□□□ -0.95
COPS3-209ENST00000486810 NBPF15Q8N660 670 aa9.11□□□□□ -0.95
COPS3-209ENST00000486810 ARXQ96QS3 562 aa9.11□□□□□ -0.95
COPS3-209ENST00000486810 IQSEC3Q9UPP2 1182 aaPredicted RBP9.11□□□□□ -0.95
COPS3-209ENST00000486810 TERTO14746 1132 aaKnown RBP9.1□□□□□ -0.95
COPS3-209ENST00000486810 PPFIA3O75145 1194 aa9.1□□□□□ -0.95
COPS3-209ENST00000486810 LCE2AQ5TA79 106 aaPredicted RBP9.1□□□□□ -0.95
COPS3-209ENST00000486810 PPARGC1BQ86YN6 1023 aaKnown RBP9.1□□□□□ -0.95
COPS3-209ENST00000486810 A6NJY4 79 aa9.09□□□□□ -0.95
COPS3-209ENST00000486810 FOXK2Q01167 660 aa9.09□□□□□ -0.95
COPS3-209ENST00000486810 C4orf17Q53FE4 359 aa9.09□□□□□ -0.95
COPS3-209ENST00000486810 TNS4Q8IZW8 715 aa9.09□□□□□ -0.95
COPS3-209ENST00000486810 CCDC155Q8N6L0 562 aa9.09□□□□□ -0.95
COPS3-209ENST00000486810 H3BM21 787 aa9.08□□□□□ -0.96
COPS3-209ENST00000486810 DPYDQ12882 1025 aa9.08□□□□□ -0.96
COPS3-209ENST00000486810 LARP1Q6PKG0 1096 aaKnown RBP9.08□□□□□ -0.96
COPS3-209ENST00000486810 CDK2AP1O14519 115 aa9.07□□□□□ -0.96
COPS3-209ENST00000486810 PHKA2P46019 1235 aa9.07□□□□□ -0.96
COPS3-209ENST00000486810 TMEM214Q6NUQ4 689 aaKnown RBP9.07□□□□□ -0.96
COPS3-209ENST00000486810 TAS1R3Q7RTX0 852 aa9.07□□□□□ -0.96
COPS3-209ENST00000486810 ANKMY2Q8IV38 441 aa9.07□□□□□ -0.96
COPS3-209ENST00000486810 TSEN2Q8NCE0 465 aaKnown RBP9.07□□□□□ -0.96
COPS3-209ENST00000486810 CUEDC1Q9NWM3 386 aaPredicted RBP9.07□□□□□ -0.96
COPS3-209ENST00000486810 SCHIP1Q9P0W5 487 aaPredicted RBP9.07□□□□□ -0.96
COPS3-209ENST00000486810 ZMIZ1Q9ULJ6 1067 aa9.07□□□□□ -0.96
COPS3-209ENST00000486810 M0R2N6 131 aa9.06□□□□□ -0.96
COPS3-209ENST00000486810 BACH1O14867 736 aa9.06□□□□□ -0.96
COPS3-209ENST00000486810 WDR44Q5JSH3 913 aa9.06□□□□□ -0.96
COPS3-209ENST00000486810 RHBDD1Q8TEB9 315 aa9.06□□□□□ -0.96
COPS3-209ENST00000486810 ERBB4Q15303 1308 aa9.05□□□□□ -0.96
COPS3-209ENST00000486810 LGR5O75473 907 aa9.05□□□□□ -0.96
COPS3-209ENST00000486810 SEC13P55735 322 aa9.05□□□□□ -0.96
COPS3-209ENST00000486810 TBCELQ5QJ74 424 aa9.05□□□□□ -0.96
COPS3-209ENST00000486810 NPAS3Q8IXF0 933 aa9.05□□□□□ -0.96
COPS3-209ENST00000486810 ZDHHC1Q8WTX9 485 aa9.05□□□□□ -0.96
COPS3-209ENST00000486810 TREML4Q6UXN2 200 aa9.04□□□□□ -0.96
COPS3-209ENST00000486810 PBXIP1Q96AQ6 731 aa9.04□□□□□ -0.96
COPS3-209ENST00000486810 TSPAN10Q9H1Z9 355 aaPredicted RBP9.04□□□□□ -0.96
COPS3-209ENST00000486810 DYRK1BQ9Y463 629 aa9.04□□□□□ -0.96
COPS3-209ENST00000486810 C21orf2O43822 256 aa9.03□□□□□ -0.96
COPS3-209ENST00000486810 ATG7O95352 703 aa9.03□□□□□ -0.96
COPS3-209ENST00000486810 THBS1P07996 1170 aa9.03□□□□□ -0.96
COPS3-209ENST00000486810 ITGA6P23229 1130 aa9.03□□□□□ -0.96
COPS3-209ENST00000486810 GNASQ5JWF2 1037 aa9.03□□□□□ -0.96
COPS3-209ENST00000486810 SLC9A9Q8IVB4 645 aa9.03□□□□□ -0.96
COPS3-209ENST00000486810 STK32AQ8WU08 396 aa9.03□□□□□ -0.96
COPS3-209ENST00000486810 TIMMDC1Q9NPL8 285 aa9.03□□□□□ -0.96
COPS3-209ENST00000486810 NOVA2Q9UNW9 492 aaKnown RBP9.03□□□□□ -0.96
COPS3-209ENST00000486810 WFS1O76024 890 aa9.02□□□□□ -0.97
COPS3-209ENST00000486810 PLA2G4AP47712 749 aa9.02□□□□□ -0.97
COPS3-209ENST00000486810 FAM69CQ0P6D2 419 aa9.02□□□□□ -0.97
COPS3-209ENST00000486810 ELOAQ14241 798 aaKnown RBP9.02□□□□□ -0.97
COPS3-209ENST00000486810 SH3PXD2AQ5TCZ1 1133 aa9.02□□□□□ -0.97
COPS3-209ENST00000486810 GAS2L2Q8NHY3 880 aa9.02□□□□□ -0.97
COPS3-209ENST00000486810 PARP3Q9Y6F1 533 aa9.02□□□□□ -0.97
COPS3-209ENST00000486810 VSIG8P0DPA2 414 aa9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms