RNA–Protein interactions for RNA: ENST00000486066.5

CHRD-216, Transcript of chordin, humanhuman

TSL 4

Gene CHRD, Length 546 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRD-216ENST00000486066 PLEKHG2Q9H7P9 1386 aa26.93■■□□□ 1.9
CHRD-216ENST00000486066 EYA1Q99502 592 aa26.92■■□□□ 1.9
CHRD-216ENST00000486066 C10orf71Q711Q0 1435 aa26.91■■□□□ 1.9
CHRD-216ENST00000486066 GNPATO15228 680 aa26.9■■□□□ 1.9
CHRD-216ENST00000486066 PHKG2P15735 406 aa26.9■■□□□ 1.9
CHRD-216ENST00000486066 ATG3Q9NT62 314 aa26.9■■□□□ 1.9
CHRD-216ENST00000486066 TMOD3Q9NYL9 352 aa26.9■■□□□ 1.9
CHRD-216ENST00000486066 SLC4A9Q96Q91 983 aa26.89■■□□□ 1.9
CHRD-216ENST00000486066 MMP10P09238 476 aa26.88■■□□□ 1.89
CHRD-216ENST00000486066 CDCA8Q53HL2 280 aa26.88■■□□□ 1.89
CHRD-216ENST00000486066 MYH14Q7Z406 1995 aaKnown RBP26.88■■□□□ 1.89
CHRD-216ENST00000486066 C4AP0C0L4 1744 aa26.87■■□□□ 1.89
CHRD-216ENST00000486066 ATP6V1AP38606 617 aa26.87■■□□□ 1.89
CHRD-216ENST00000486066 IFNL2Q8IZJ0 200 aa26.86■■□□□ 1.89
CHRD-216ENST00000486066 ARFGEF1Q9Y6D6 1849 aa26.86■■□□□ 1.89
CHRD-216ENST00000486066 PCNTO95613 3336 aa26.85■■□□□ 1.89
CHRD-216ENST00000486066 TGFB2P61812 414 aa26.85■■□□□ 1.89
CHRD-216ENST00000486066 POLKQ9UBT6 870 aa26.85■■□□□ 1.89
CHRD-216ENST00000486066 DNAJC5GQ8N7S2 189 aa26.83■■□□□ 1.89
CHRD-216ENST00000486066 RC3H1Q5TC82 1133 aaKnown RBP26.81■■□□□ 1.88
CHRD-216ENST00000486066 PPM1GO15355 546 aaPredicted RBP26.8■■□□□ 1.88
CHRD-216ENST00000486066 NLGN1Q8N2Q7 840 aa26.8■■□□□ 1.88
CHRD-216ENST00000486066 CNTNAP4Q9C0A0 1308 aa26.8■■□□□ 1.88
CHRD-216ENST00000486066 TOMM70O94826 608 aa26.79■■□□□ 1.88
CHRD-216ENST00000486066 ADRA2BP18089 450 aa26.79■■□□□ 1.88
CHRD-216ENST00000486066 APLP1P51693 650 aa26.79■■□□□ 1.88
CHRD-216ENST00000486066 EIF4A2Q14240 407 aaKnown RBP26.79■■□□□ 1.88
CHRD-216ENST00000486066 A0A0G2JLW4 131 aa26.78■■□□□ 1.88
CHRD-216ENST00000486066 GYS1P13807 737 aa26.78■■□□□ 1.88
CHRD-216ENST00000486066 TRAPPC3LQ5T215 181 aa26.78■■□□□ 1.88
CHRD-216ENST00000486066 ARHGEF1Q92888 912 aaKnown RBP26.78■■□□□ 1.88
CHRD-216ENST00000486066 RTCBQ9Y3I0 505 aaKnown RBP26.78■■□□□ 1.88
CHRD-216ENST00000486066 KDM6AO15550 1401 aaPredicted RBP26.78■■□□□ 1.88
CHRD-216ENST00000486066 WDR90Q96KV7 1748 aa26.78■■□□□ 1.88
CHRD-216ENST00000486066 ERVV-2B6SEH9 535 aa26.77■■□□□ 1.88
CHRD-216ENST00000486066 KCNA3P22001 575 aa26.77■■□□□ 1.88
CHRD-216ENST00000486066 ADAMTS7Q9UKP4 1686 aa26.76■■□□□ 1.87
CHRD-216ENST00000486066 BCS1LQ9Y276 419 aa26.76■■□□□ 1.87
CHRD-216ENST00000486066 DPEP1P16444 411 aa26.75■■□□□ 1.87
CHRD-216ENST00000486066 RPS6KA4O75676 772 aa26.74■■□□□ 1.87
CHRD-216ENST00000486066 NMRK2Q9NPI5 230 aa26.74■■□□□ 1.87
CHRD-216ENST00000486066 TJP1Q07157 1748 aa26.73■■□□□ 1.87
CHRD-216ENST00000486066 DCAF5Q96JK2 942 aa26.72■■□□□ 1.87
CHRD-216ENST00000486066 CCDC87Q9NVE4 849 aa26.72■■□□□ 1.87
CHRD-216ENST00000486066 SBF1O95248 1867 aa26.72■■□□□ 1.87
CHRD-216ENST00000486066 ARHGAP27Q6ZUM4 889 aa26.69■■□□□ 1.86
CHRD-216ENST00000486066 HSP90AB1P08238 724 aaKnown RBP26.68■■□□□ 1.86
CHRD-216ENST00000486066 RBM46Q8TBY0 533 aaKnown RBP26.68■■□□□ 1.86
CHRD-216ENST00000486066 RBM42Q9BTD8 480 aaKnown RBP26.68■■□□□ 1.86
CHRD-216ENST00000486066 FCHSD2O94868 740 aa26.67■■□□□ 1.86
CHRD-216ENST00000486066 RFC4P35249 363 aa26.66■■□□□ 1.86
CHRD-216ENST00000486066 PARP3Q9Y6F1 533 aa26.66■■□□□ 1.86
CHRD-216ENST00000486066 SCN11AQ9UI33 1791 aa26.66■■□□□ 1.86
CHRD-216ENST00000486066 DDR1Q08345 913 aa26.65■■□□□ 1.86
CHRD-216ENST00000486066 C9orf131Q5VYM1 1079 aa26.65■■□□□ 1.86
CHRD-216ENST00000486066 TNRC6CQ9HCJ0 1690 aaKnown RBP26.65■■□□□ 1.86
CHRD-216ENST00000486066 KCPQ6ZWJ8 1503 aa26.64■■□□□ 1.85
CHRD-216ENST00000486066 USP42Q9H9J4 1324 aaKnown RBP26.64■■□□□ 1.85
CHRD-216ENST00000486066 CRKLP46109 303 aaKnown RBP26.62■■□□□ 1.85
CHRD-216ENST00000486066 FKBP8Q14318 412 aa26.62■■□□□ 1.85
CHRD-216ENST00000486066 PLEKHO1Q53GL0 409 aaPredicted RBP26.62■■□□□ 1.85
CHRD-216ENST00000486066 JMYQ8N9B5 988 aa26.62■■□□□ 1.85
CHRD-216ENST00000486066 PIM2Q9P1W9 311 aa26.62■■□□□ 1.85
CHRD-216ENST00000486066 NRXN2Q9P2S2 1712 aa26.62■■□□□ 1.85
CHRD-216ENST00000486066 AMOTQ4VCS5 1084 aa26.61■■□□□ 1.85
CHRD-216ENST00000486066 ZNF530Q6P9A1 599 aaPredicted RBP26.61■■□□□ 1.85
CHRD-216ENST00000486066 SRP68Q9UHB9 627 aaKnown RBP26.61■■□□□ 1.85
CHRD-216ENST00000486066 CABP4P57796 275 aa26.6■■□□□ 1.85
CHRD-216ENST00000486066 AFDNP55196 1824 aaKnown RBP26.6■■□□□ 1.85
CHRD-216ENST00000486066 DLEC1Q9Y238 1755 aa26.59■■□□□ 1.85
CHRD-216ENST00000486066 TNNT2P45379 298 aaPredicted RBP26.59■■□□□ 1.85
CHRD-216ENST00000486066 FSTL1Q12841 308 aa26.59■■□□□ 1.85
CHRD-216ENST00000486066 AEBP1Q8IUX7 1158 aa26.59■■□□□ 1.85
CHRD-216ENST00000486066 TM4SF1P30408 202 aa26.58■■□□□ 1.85
CHRD-216ENST00000486066 INTS5Q6P9B9 1019 aaKnown RBP26.58■■□□□ 1.85
CHRD-216ENST00000486066 KLRG1Q96E93 195 aa26.58■■□□□ 1.85
CHRD-216ENST00000486066 POLRMTO00411 1230 aaKnown RBP26.57■■□□□ 1.84
CHRD-216ENST00000486066 DALRD3Q5D0E6 543 aaKnown RBP26.57■■□□□ 1.84
CHRD-216ENST00000486066 PTCD1O75127 700 aaKnown RBP26.56■■□□□ 1.84
CHRD-216ENST00000486066 HTRA3P83110 453 aa26.56■■□□□ 1.84
CHRD-216ENST00000486066 NFATC2IPQ8NCF5 419 aa26.56■■□□□ 1.84
CHRD-216ENST00000486066 VIRMAQ69YN4 1812 aaKnown RBP26.55■■□□□ 1.84
CHRD-216ENST00000486066 MRC1P22897 1456 aa26.55■■□□□ 1.84
CHRD-216ENST00000486066 MTHFSP49914 203 aa26.55■■□□□ 1.84
CHRD-216ENST00000486066 TIMELESSQ9UNS1 1208 aa26.55■■□□□ 1.84
CHRD-216ENST00000486066 CHRNA5P30532 468 aa26.54■■□□□ 1.84
CHRD-216ENST00000486066 RNF181Q9P0P0 153 aa26.53■■□□□ 1.84
CHRD-216ENST00000486066 KDM2BQ8NHM5 1336 aa26.53■■□□□ 1.84
CHRD-216ENST00000486066 SOS1Q07889 1333 aaPredicted RBP26.51■■□□□ 1.83
CHRD-216ENST00000486066 ZC3H4Q9UPT8 1303 aaKnown RBP26.51■■□□□ 1.83
CHRD-216ENST00000486066 PRELPP51888 382 aa26.5■■□□□ 1.83
CHRD-216ENST00000486066 RRAGCQ9HB90 399 aa26.5■■□□□ 1.83
CHRD-216ENST00000486066 C1orf141Q5JVX7 400 aa26.49■■□□□ 1.83
CHRD-216ENST00000486066 COL13A1Q5TAT6 717 aaPredicted RBP26.49■■□□□ 1.83
CHRD-216ENST00000486066 C16orf71Q8IYS4 520 aaPredicted RBP26.49■■□□□ 1.83
CHRD-216ENST00000486066 PANK3Q9H999 370 aa26.49■■□□□ 1.83
CHRD-216ENST00000486066 UBR2Q8IWV8 1755 aa26.48■■□□□ 1.83
CHRD-216ENST00000486066 TIAM2Q8IVF5 1701 aa26.48■■□□□ 1.83
CHRD-216ENST00000486066 CCDC88AQ3V6T2 1871 aa26.47■■□□□ 1.83
CHRD-216ENST00000486066 IL13P35225 146 aa26.47■■□□□ 1.83
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms