RNA–Protein interactions for RNA: ENST00000485921.5

ABCF3-216, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 2

Gene ABCF3, Length 813 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-216ENST00000485921 CEMIPQ8WUJ3 1361 aa31.16■■■□□ 2.58
ABCF3-216ENST00000485921 VIRMAQ69YN4 1812 aaKnown RBP31.14■■■□□ 2.58
ABCF3-216ENST00000485921 DLG5Q8TDM6 1919 aa31.14■■■□□ 2.58
ABCF3-216ENST00000485921 TEFQ10587 303 aa31.14■■■□□ 2.58
ABCF3-216ENST00000485921 MRC1P22897 1456 aa31.14■■■□□ 2.57
ABCF3-216ENST00000485921 SMARCC1Q92922 1105 aaPredicted RBP31.13■■■□□ 2.57
ABCF3-216ENST00000485921 ASAP1Q9ULH1 1129 aa31.13■■■□□ 2.57
ABCF3-216ENST00000485921 ATG3Q9NT62 314 aa31.12■■■□□ 2.57
ABCF3-216ENST00000485921 LMOD3Q0VAK6 560 aa31.11■■■□□ 2.57
ABCF3-216ENST00000485921 TXNRD1Q16881 649 aa31.11■■■□□ 2.57
ABCF3-216ENST00000485921 PROM2Q8N271 834 aa31.11■■■□□ 2.57
ABCF3-216ENST00000485921 PALLDQ8WX93 1383 aa31.1■■■□□ 2.57
ABCF3-216ENST00000485921 RGPD3A6NKT7 1758 aaPredicted RBP31.09■■■□□ 2.57
ABCF3-216ENST00000485921 RGPD4Q7Z3J3 1758 aa31.09■■■□□ 2.57
ABCF3-216ENST00000485921 THUMPD2Q9BTF0 503 aaKnown RBP31.08■■■□□ 2.57
ABCF3-216ENST00000485921 TRIM35Q9UPQ4 493 aa31.07■■■□□ 2.56
ABCF3-216ENST00000485921 SENP3-EIF4A1A0A087X0R7 540 aa31.05■■■□□ 2.56
ABCF3-216ENST00000485921 SLC39A6Q13433 755 aa31.04■■■□□ 2.56
ABCF3-216ENST00000485921 SLC27A3Q5K4L6 730 aa31.04■■■□□ 2.56
ABCF3-216ENST00000485921 BTBD11A6QL63 1104 aa31.03■■■□□ 2.56
ABCF3-216ENST00000485921 TAF7Q15545 349 aaPredicted RBP31.03■■■□□ 2.56
ABCF3-216ENST00000485921 CCNL1Q9UK58 526 aaPredicted RBP31.03■■■□□ 2.56
ABCF3-216ENST00000485921 LY75O60449 1722 aa31.02■■■□□ 2.56
ABCF3-216ENST00000485921 KCNQ4P56696 695 aa31.02■■■□□ 2.56
ABCF3-216ENST00000485921 LRRC4BQ9NT99 713 aa31.02■■■□□ 2.56
ABCF3-216ENST00000485921 SIPA1L3O60292 1781 aaPredicted RBP31.02■■■□□ 2.56
ABCF3-216ENST00000485921 RREB1Q92766 1687 aa31.01■■■□□ 2.55
ABCF3-216ENST00000485921 LOC102724428A0A0B4J2F2 783 aa31.01■■■□□ 2.55
ABCF3-216ENST00000485921 SIK1P57059 783 aa31.01■■■□□ 2.55
ABCF3-216ENST00000485921 RBM42Q9BTD8 480 aaKnown RBP31.01■■■□□ 2.55
ABCF3-216ENST00000485921 PTCD1O75127 700 aaKnown RBP30.99■■■□□ 2.55
ABCF3-216ENST00000485921 TTC5Q8N0Z6 440 aa30.99■■■□□ 2.55
ABCF3-216ENST00000485921 ZNF790Q6PG37 636 aa30.98■■■□□ 2.55
ABCF3-216ENST00000485921 MIS18AQ9NYP9 233 aa30.97■■■□□ 2.55
ABCF3-216ENST00000485921 PAPPAQ13219 1627 aa30.97■■■□□ 2.55
ABCF3-216ENST00000485921 NUP188Q5SRE5 1749 aa30.96■■■□□ 2.55
ABCF3-216ENST00000485921 ATP6V1AP38606 617 aa30.96■■■□□ 2.55
ABCF3-216ENST00000485921 NCBP3Q53F19 620 aaKnown RBP30.96■■■□□ 2.55
ABCF3-216ENST00000485921 KCNQ3O43525 872 aa30.95■■■□□ 2.55
ABCF3-216ENST00000485921 CCDC27Q2M243 656 aa30.95■■■□□ 2.55
ABCF3-216ENST00000485921 SLC4A9Q96Q91 983 aa30.95■■■□□ 2.55
ABCF3-216ENST00000485921 SALL2Q9Y467 1007 aaPredicted RBP30.95■■■□□ 2.55
ABCF3-216ENST00000485921 NBPF14Q5TI25 921 aa30.93■■■□□ 2.54
ABCF3-216ENST00000485921 ITPK1Q13572 414 aa30.92■■■□□ 2.54
ABCF3-216ENST00000485921 WWC1Q8IX03 1113 aa30.92■■■□□ 2.54
ABCF3-216ENST00000485921 KCPQ6ZWJ8 1503 aa30.92■■■□□ 2.54
ABCF3-216ENST00000485921 CALD1Q05682 793 aaKnown RBP30.91■■■□□ 2.54
ABCF3-216ENST00000485921 ZNF496Q96IT1 587 aaPredicted RBP30.91■■■□□ 2.54
ABCF3-216ENST00000485921 HMGB2P26583 209 aaKnown RBP30.9■■■□□ 2.54
ABCF3-216ENST00000485921 NGEFQ8N5V2 710 aa30.9■■■□□ 2.54
ABCF3-216ENST00000485921 FMNL2Q96PY5 1086 aa30.9■■■□□ 2.54
ABCF3-216ENST00000485921 BABAM1Q9NWV8 329 aa30.9■■■□□ 2.54
ABCF3-216ENST00000485921 TSPYL4Q9UJ04 414 aa30.9■■■□□ 2.54
ABCF3-216ENST00000485921 LAS1LQ9Y4W2 734 aaKnown RBP30.9■■■□□ 2.54
ABCF3-216ENST00000485921 ANO8Q9HCE9 1232 aaPredicted RBP30.89■■■□□ 2.54
ABCF3-216ENST00000485921 UBR2Q8IWV8 1755 aa30.88■■■□□ 2.53
ABCF3-216ENST00000485921 LINC00116Q8NCU8 138 aa30.88■■■□□ 2.53
ABCF3-216ENST00000485921 STK32BQ9NY57 414 aa30.88■■■□□ 2.53
ABCF3-216ENST00000485921 CHL1O00533 1208 aa30.87■■■□□ 2.53
ABCF3-216ENST00000485921 VSIG10Q8N0Z9 540 aa30.87■■■□□ 2.53
ABCF3-216ENST00000485921 CFAP44Q96MT7 982 aa30.86■■■□□ 2.53
ABCF3-216ENST00000485921 HEG1Q9ULI3 1381 aa30.86■■■□□ 2.53
ABCF3-216ENST00000485921 ZNF831Q5JPB2 1677 aa30.86■■■□□ 2.53
ABCF3-216ENST00000485921 C5P01031 1676 aa30.85■■■□□ 2.53
ABCF3-216ENST00000485921 SLC15A2Q16348 729 aa30.85■■■□□ 2.53
ABCF3-216ENST00000485921 ZNF827Q17R98 1081 aa30.85■■■□□ 2.53
ABCF3-216ENST00000485921 DNAJC10Q8IXB1 793 aa30.85■■■□□ 2.53
ABCF3-216ENST00000485921 AKT1S1Q96B36 256 aa30.85■■■□□ 2.53
ABCF3-216ENST00000485921 TAF1LQ8IZX4 1826 aa30.84■■■□□ 2.53
ABCF3-216ENST00000485921 KDM3BQ7LBC6 1761 aa30.84■■■□□ 2.53
ABCF3-216ENST00000485921 ZNF853P0CG23 659 aa30.83■■■□□ 2.53
ABCF3-216ENST00000485921 EIF4A1P60842 406 aaKnown RBP30.83■■■□□ 2.53
ABCF3-216ENST00000485921 GNAI1P63096 354 aa30.83■■■□□ 2.53
ABCF3-216ENST00000485921 IFT57Q9NWB7 429 aa30.83■■■□□ 2.53
ABCF3-216ENST00000485921 R3HDM1Q15032 1099 aaKnown RBP30.82■■■□□ 2.52
ABCF3-216ENST00000485921 WDR63Q8IWG1 891 aa30.82■■■□□ 2.52
ABCF3-216ENST00000485921 TJP1Q07157 1748 aa30.81■■■□□ 2.52
ABCF3-216ENST00000485921 SNRPA1P09661 255 aaKnown RBP30.8■■■□□ 2.52
ABCF3-216ENST00000485921 AK7Q96M32 723 aa30.8■■■□□ 2.52
ABCF3-216ENST00000485921 TEX13AQ9BXU3 409 aaPredicted RBP30.8■■■□□ 2.52
ABCF3-216ENST00000485921 MBIPQ9NS73 344 aa30.8■■■□□ 2.52
ABCF3-216ENST00000485921 TFCP2L1Q9NZI6 479 aa30.8■■■□□ 2.52
ABCF3-216ENST00000485921 C4BP0C0L5 1744 aa30.8■■■□□ 2.52
ABCF3-216ENST00000485921 IL16Q14005 1332 aa30.79■■■□□ 2.52
ABCF3-216ENST00000485921 PSDA5PKW4 1024 aaPredicted RBP30.79■■■□□ 2.52
ABCF3-216ENST00000485921 CICQ96RK0 1608 aaPredicted RBP30.79■■■□□ 2.52
ABCF3-216ENST00000485921 CYP19A1P11511 503 aaPredicted RBP30.78■■■□□ 2.52
ABCF3-216ENST00000485921 CNTNAP4Q9C0A0 1308 aa30.77■■■□□ 2.52
ABCF3-216ENST00000485921 CRKLP46109 303 aaKnown RBP30.77■■■□□ 2.52
ABCF3-216ENST00000485921 RC3H1Q5TC82 1133 aaKnown RBP30.77■■■□□ 2.52
ABCF3-216ENST00000485921 COL5A3P25940 1745 aaPredicted RBP30.76■■■□□ 2.52
ABCF3-216ENST00000485921 PRAMEF22A3QJZ6 481 aa30.76■■■□□ 2.51
ABCF3-216ENST00000485921 STARD3NLO95772 234 aa30.76■■■□□ 2.51
ABCF3-216ENST00000485921 GIGYF1O75420 1035 aaPredicted RBP30.75■■■□□ 2.51
ABCF3-216ENST00000485921 USP16Q9Y5T5 823 aa30.75■■■□□ 2.51
ABCF3-216ENST00000485921 ZNF521Q96K83 1311 aa30.74■■■□□ 2.51
ABCF3-216ENST00000485921 GNPATO15228 680 aa30.74■■■□□ 2.51
ABCF3-216ENST00000485921 INTS5Q6P9B9 1019 aaKnown RBP30.73■■■□□ 2.51
ABCF3-216ENST00000485921 CCDC87Q9NVE4 849 aa30.73■■■□□ 2.51
ABCF3-216ENST00000485921 KRT24Q2M2I5 525 aa30.71■■■□□ 2.51
Retrieved 100 of 20,778 RNA–protein pairs in 258.4 ms