RNA–Protein interactions for RNA: ENST00000484646.1

ATRAID-205, Transcript of all-trans retinoic acid induced differentiation factor, humanhuman

TSL 2

Gene ATRAID, Length 548 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATRAID-205ENST00000484646 CCDC87Q9NVE4 849 aa22.95■■□□□ 1.26
ATRAID-205ENST00000484646 RRS1Q15050 365 aaKnown RBP22.94■■□□□ 1.26
ATRAID-205ENST00000484646 NLGN1Q8N2Q7 840 aa22.94■■□□□ 1.26
ATRAID-205ENST00000484646 MAP2P11137 1827 aaKnown RBP22.93■■□□□ 1.26
ATRAID-205ENST00000484646 PKD1L3Q7Z443 1732 aa22.93■■□□□ 1.26
ATRAID-205ENST00000484646 ATP6V1AP38606 617 aa22.92■■□□□ 1.26
ATRAID-205ENST00000484646 TMF1P82094 1093 aa22.92■■□□□ 1.26
ATRAID-205ENST00000484646 RNF181Q9P0P0 153 aa22.92■■□□□ 1.26
ATRAID-205ENST00000484646 TNRC6CQ9HCJ0 1690 aaKnown RBP22.91■■□□□ 1.26
ATRAID-205ENST00000484646 ITPK1Q13572 414 aa22.91■■□□□ 1.26
ATRAID-205ENST00000484646 BRCA1P38398 1863 aaKnown RBP22.9■■□□□ 1.26
ATRAID-205ENST00000484646 TRAPPC3LQ5T215 181 aa22.9■■□□□ 1.26
ATRAID-205ENST00000484646 PUS7Q96PZ0 661 aaKnown RBP22.9■■□□□ 1.26
ATRAID-205ENST00000484646 CARD11Q9BXL7 1154 aa22.89■■□□□ 1.25
ATRAID-205ENST00000484646 TMOD3Q9NYL9 352 aa22.89■■□□□ 1.25
ATRAID-205ENST00000484646 PIM2Q9P1W9 311 aa22.89■■□□□ 1.25
ATRAID-205ENST00000484646 RTCBQ9Y3I0 505 aaKnown RBP22.89■■□□□ 1.25
ATRAID-205ENST00000484646 ARFGEF1Q9Y6D6 1849 aa22.89■■□□□ 1.25
ATRAID-205ENST00000484646 SLC34A2O95436 690 aa22.88■■□□□ 1.25
ATRAID-205ENST00000484646 PARP3Q9Y6F1 533 aa22.88■■□□□ 1.25
ATRAID-205ENST00000484646 ASAP1Q9ULH1 1129 aa22.87■■□□□ 1.25
ATRAID-205ENST00000484646 C4AP0C0L4 1744 aa22.87■■□□□ 1.25
ATRAID-205ENST00000484646 INSRP06213 1382 aa22.87■■□□□ 1.25
ATRAID-205ENST00000484646 KCNA3P22001 575 aa22.86■■□□□ 1.25
ATRAID-205ENST00000484646 NKX1-1Q15270 411 aaPredicted RBP22.86■■□□□ 1.25
ATRAID-205ENST00000484646 HSP90AB2PQ58FF8 381 aa22.86■■□□□ 1.25
ATRAID-205ENST00000484646 DALRD3Q5D0E6 543 aaKnown RBP22.86■■□□□ 1.25
ATRAID-205ENST00000484646 DCAF5Q96JK2 942 aa22.86■■□□□ 1.25
ATRAID-205ENST00000484646 SIN3AQ96ST3 1273 aa22.84■■□□□ 1.25
ATRAID-205ENST00000484646 SPG7Q9UQ90 795 aa22.84■■□□□ 1.25
ATRAID-205ENST00000484646 GYS1P13807 737 aa22.83■■□□□ 1.25
ATRAID-205ENST00000484646 ADRA2BP18089 450 aa22.83■■□□□ 1.25
ATRAID-205ENST00000484646 ARHGEF1Q92888 912 aaKnown RBP22.83■■□□□ 1.25
ATRAID-205ENST00000484646 FLT4P35916 1363 aa22.83■■□□□ 1.25
ATRAID-205ENST00000484646 RFC4P35249 363 aa22.82■■□□□ 1.24
ATRAID-205ENST00000484646 GGNBP2Q9H3C7 697 aa22.82■■□□□ 1.24
ATRAID-205ENST00000484646 NEUROD1Q13562 356 aa22.81■■□□□ 1.24
ATRAID-205ENST00000484646 VEGFAP15692 232 aaPredicted RBP22.8■■□□□ 1.24
ATRAID-205ENST00000484646 ATG3Q9NT62 314 aa22.8■■□□□ 1.24
ATRAID-205ENST00000484646 ZC3H4Q9UPT8 1303 aaKnown RBP22.8■■□□□ 1.24
ATRAID-205ENST00000484646 KIF24Q5T7B8 1368 aa22.78■■□□□ 1.24
ATRAID-205ENST00000484646 FYB1O15117 783 aa22.78■■□□□ 1.24
ATRAID-205ENST00000484646 SBF1O95248 1867 aa22.78■■□□□ 1.24
ATRAID-205ENST00000484646 RC3H1Q5TC82 1133 aaKnown RBP22.76■■□□□ 1.23
ATRAID-205ENST00000484646 KDRP35968 1356 aa22.76■■□□□ 1.23
ATRAID-205ENST00000484646 GLTPD2A6NH11 291 aa22.75■■□□□ 1.23
ATRAID-205ENST00000484646 RPS6KA4O75676 772 aa22.75■■□□□ 1.23
ATRAID-205ENST00000484646 IFNL2Q8IZJ0 200 aa22.75■■□□□ 1.23
ATRAID-205ENST00000484646 RBM42Q9BTD8 480 aaKnown RBP22.75■■□□□ 1.23
ATRAID-205ENST00000484646 CNTNAP4Q9C0A0 1308 aa22.75■■□□□ 1.23
ATRAID-205ENST00000484646 CHRNA5P30532 468 aa22.74■■□□□ 1.23
ATRAID-205ENST00000484646 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP22.74■■□□□ 1.23
ATRAID-205ENST00000484646 RASSF7Q02833 373 aa22.73■■□□□ 1.23
ATRAID-205ENST00000484646 NCAPD2Q15021 1401 aa22.73■■□□□ 1.23
ATRAID-205ENST00000484646 PHKG2P15735 406 aa22.72■■□□□ 1.23
ATRAID-205ENST00000484646 SLC4A9Q96Q91 983 aa22.72■■□□□ 1.23
ATRAID-205ENST00000484646 LMNB1P20700 586 aa22.71■■□□□ 1.23
ATRAID-205ENST00000484646 ZNF831Q5JPB2 1677 aa22.71■■□□□ 1.23
ATRAID-205ENST00000484646 KDM6AO15550 1401 aaPredicted RBP22.7■■□□□ 1.22
ATRAID-205ENST00000484646 COL5A3P25940 1745 aaPredicted RBP22.7■■□□□ 1.22
ATRAID-205ENST00000484646 DDR1Q08345 913 aa22.69■■□□□ 1.22
ATRAID-205ENST00000484646 MKRN1Q9UHC7 482 aaKnown RBP22.69■■□□□ 1.22
ATRAID-205ENST00000484646 TONSLQ96HA7 1378 aa22.68■■□□□ 1.22
ATRAID-205ENST00000484646 FOXN1O15353 648 aa22.68■■□□□ 1.22
ATRAID-205ENST00000484646 SLC24A1O60721 1099 aa22.68■■□□□ 1.22
ATRAID-205ENST00000484646 TESK2Q96S53 571 aa22.68■■□□□ 1.22
ATRAID-205ENST00000484646 PRDM10Q9NQV6 1147 aa22.68■■□□□ 1.22
ATRAID-205ENST00000484646 EMILIN1Q9Y6C2 1016 aa22.68■■□□□ 1.22
ATRAID-205ENST00000484646 FKBP8Q14318 412 aa22.67■■□□□ 1.22
ATRAID-205ENST00000484646 CREBZFQ9NS37 354 aa22.67■■□□□ 1.22
ATRAID-205ENST00000484646 SRP68Q9UHB9 627 aaKnown RBP22.67■■□□□ 1.22
ATRAID-205ENST00000484646 PPM1GO15355 546 aaPredicted RBP22.66■■□□□ 1.22
ATRAID-205ENST00000484646 USP42Q9H9J4 1324 aaKnown RBP22.65■■□□□ 1.22
ATRAID-205ENST00000484646 KIF20BQ96Q89 1820 aa22.64■■□□□ 1.22
ATRAID-205ENST00000484646 ST20-MTHFSA0A0A6YYL1 179 aa22.64■■□□□ 1.21
ATRAID-205ENST00000484646 ERVV-2B6SEH9 535 aa22.64■■□□□ 1.21
ATRAID-205ENST00000484646 EYA1Q99502 592 aa22.64■■□□□ 1.21
ATRAID-205ENST00000484646 PCDH10Q9P2E7 1040 aa22.64■■□□□ 1.21
ATRAID-205ENST00000484646 MYH14Q7Z406 1995 aaKnown RBP22.63■■□□□ 1.21
ATRAID-205ENST00000484646 TIAM2Q8IVF5 1701 aa22.63■■□□□ 1.21
ATRAID-205ENST00000484646 POLRMTO00411 1230 aaKnown RBP22.63■■□□□ 1.21
ATRAID-205ENST00000484646 DPY19L2Q6NUT2 758 aa22.63■■□□□ 1.21
ATRAID-205ENST00000484646 AIDAQ96BJ3 306 aa22.63■■□□□ 1.21
ATRAID-205ENST00000484646 POTECB2RU33 542 aa22.62■■□□□ 1.21
ATRAID-205ENST00000484646 CRKLP46109 303 aaKnown RBP22.62■■□□□ 1.21
ATRAID-205ENST00000484646 CTCFP49711 727 aaPredicted RBP22.62■■□□□ 1.21
ATRAID-205ENST00000484646 FAM161AQ3B820 660 aa22.61■■□□□ 1.21
ATRAID-205ENST00000484646 CHADLQ6NUI6 762 aa22.6■■□□□ 1.21
ATRAID-205ENST00000484646 WASHC2AQ641Q2 1341 aa22.59■■□□□ 1.21
ATRAID-205ENST00000484646 PTCD1O75127 700 aaKnown RBP22.59■■□□□ 1.21
ATRAID-205ENST00000484646 HSP90AB1P08238 724 aaKnown RBP22.59■■□□□ 1.21
ATRAID-205ENST00000484646 TM4SF1P30408 202 aa22.59■■□□□ 1.21
ATRAID-205ENST00000484646 CNTNAP1P78357 1384 aa22.59■■□□□ 1.21
ATRAID-205ENST00000484646 TTLL6Q8N841 843 aa22.58■■□□□ 1.21
ATRAID-205ENST00000484646 CABP4P57796 275 aa22.57■■□□□ 1.2
ATRAID-205ENST00000484646 CCDC88AQ3V6T2 1871 aa22.56■■□□□ 1.2
ATRAID-205ENST00000484646 NFKBIEO00221 500 aa22.56■■□□□ 1.2
ATRAID-205ENST00000484646 ZPR1O75312 459 aa22.56■■□□□ 1.2
ATRAID-205ENST00000484646 ANKRD26Q9UPS8 1709 aa22.54■■□□□ 1.2
ATRAID-205ENST00000484646 USPL1Q5W0Q7 1092 aa22.54■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 91.2 ms