RNA–Protein interactions for RNA: ENST00000484555.1

PABPC4-215, Transcript of poly(A) binding protein cytoplasmic 4, humanhuman

TSL 5

Gene PABPC4, Length 450 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC4-215ENST00000484555 PXDNLA1KZ92 1463 aa17.33■□□□□ 0.37
PABPC4-215ENST00000484555 MMP10P09238 476 aa17.33■□□□□ 0.36
PABPC4-215ENST00000484555 PHKG2P15735 406 aa17.33■□□□□ 0.36
PABPC4-215ENST00000484555 IFNL2Q8IZJ0 200 aa17.33■□□□□ 0.36
PABPC4-215ENST00000484555 EYA1Q99502 592 aa17.33■□□□□ 0.36
PABPC4-215ENST00000484555 PLEKHG2Q9H7P9 1386 aa17.32■□□□□ 0.36
PABPC4-215ENST00000484555 TOMM70O94826 608 aa17.32■□□□□ 0.36
PABPC4-215ENST00000484555 NLGN1Q8N2Q7 840 aa17.32■□□□□ 0.36
PABPC4-215ENST00000484555 DNAJC5GQ8N7S2 189 aa17.32■□□□□ 0.36
PABPC4-215ENST00000484555 ATG3Q9NT62 314 aa17.32■□□□□ 0.36
PABPC4-215ENST00000484555 ZNF831Q5JPB2 1677 aa17.32■□□□□ 0.36
PABPC4-215ENST00000484555 TRAPPC3LQ5T215 181 aa17.3■□□□□ 0.36
PABPC4-215ENST00000484555 RC3H1Q5TC82 1133 aaKnown RBP17.3■□□□□ 0.36
PABPC4-215ENST00000484555 C10orf71Q711Q0 1435 aa17.3■□□□□ 0.36
PABPC4-215ENST00000484555 KDRP35968 1356 aa17.29■□□□□ 0.36
PABPC4-215ENST00000484555 ADRA2BP18089 450 aa17.29■□□□□ 0.36
PABPC4-215ENST00000484555 RTCBQ9Y3I0 505 aaKnown RBP17.29■□□□□ 0.36
PABPC4-215ENST00000484555 N4BP2Q86UW6 1770 aaPredicted RBP17.28■□□□□ 0.36
PABPC4-215ENST00000484555 A0A0G2JLW4 131 aa17.28■□□□□ 0.36
PABPC4-215ENST00000484555 PPM1GO15355 546 aaPredicted RBP17.28■□□□□ 0.36
PABPC4-215ENST00000484555 BCS1LQ9Y276 419 aa17.28■□□□□ 0.36
PABPC4-215ENST00000484555 ERVV-2B6SEH9 535 aa17.27■□□□□ 0.36
PABPC4-215ENST00000484555 ARHGEF1Q92888 912 aaKnown RBP17.27■□□□□ 0.36
PABPC4-215ENST00000484555 SLC4A9Q96Q91 983 aa17.27■□□□□ 0.36
PABPC4-215ENST00000484555 POLKQ9UBT6 870 aa17.27■□□□□ 0.36
PABPC4-215ENST00000484555 ARHGAP27Q6ZUM4 889 aa17.26■□□□□ 0.35
PABPC4-215ENST00000484555 CCDC87Q9NVE4 849 aa17.26■□□□□ 0.35
PABPC4-215ENST00000484555 CNTNAP4Q9C0A0 1308 aa17.25■□□□□ 0.35
PABPC4-215ENST00000484555 BRCA1P38398 1863 aaKnown RBP17.25■□□□□ 0.35
PABPC4-215ENST00000484555 C4AP0C0L4 1744 aa17.25■□□□□ 0.35
PABPC4-215ENST00000484555 RPS6KA4O75676 772 aa17.25■□□□□ 0.35
PABPC4-215ENST00000484555 GYS1P13807 737 aa17.25■□□□□ 0.35
PABPC4-215ENST00000484555 DPEP1P16444 411 aa17.25■□□□□ 0.35
PABPC4-215ENST00000484555 COL5A3P25940 1745 aaPredicted RBP17.24■□□□□ 0.35
PABPC4-215ENST00000484555 FCHSD2O94868 740 aa17.24■□□□□ 0.35
PABPC4-215ENST00000484555 KCNA3P22001 575 aa17.24■□□□□ 0.35
PABPC4-215ENST00000484555 RBM46Q8TBY0 533 aaKnown RBP17.24■□□□□ 0.35
PABPC4-215ENST00000484555 NMRK2Q9NPI5 230 aa17.24■□□□□ 0.35
PABPC4-215ENST00000484555 HSP90AB1P08238 724 aaKnown RBP17.23■□□□□ 0.35
PABPC4-215ENST00000484555 RFC4P35249 363 aa17.23■□□□□ 0.35
PABPC4-215ENST00000484555 EIF4A2Q14240 407 aaKnown RBP17.23■□□□□ 0.35
PABPC4-215ENST00000484555 DCAF5Q96JK2 942 aa17.23■□□□□ 0.35
PABPC4-215ENST00000484555 PARP3Q9Y6F1 533 aa17.23■□□□□ 0.35
PABPC4-215ENST00000484555 ARFGEF1Q9Y6D6 1849 aa17.22■□□□□ 0.35
PABPC4-215ENST00000484555 RBM42Q9BTD8 480 aaKnown RBP17.22■□□□□ 0.35
PABPC4-215ENST00000484555 FSTL1Q12841 308 aa17.2■□□□□ 0.34
PABPC4-215ENST00000484555 C9orf131Q5VYM1 1079 aa17.2■□□□□ 0.34
PABPC4-215ENST00000484555 PIM2Q9P1W9 311 aa17.2■□□□□ 0.34
PABPC4-215ENST00000484555 WDR90Q96KV7 1748 aa17.2■□□□□ 0.34
PABPC4-215ENST00000484555 MYH14Q7Z406 1995 aaKnown RBP17.19■□□□□ 0.34
PABPC4-215ENST00000484555 JMYQ8N9B5 988 aa17.19■□□□□ 0.34
PABPC4-215ENST00000484555 PLEKHO1Q53GL0 409 aaPredicted RBP17.18■□□□□ 0.34
PABPC4-215ENST00000484555 KLRG1Q96E93 195 aa17.18■□□□□ 0.34
PABPC4-215ENST00000484555 KDM6AO15550 1401 aaPredicted RBP17.18■□□□□ 0.34
PABPC4-215ENST00000484555 CABP4P57796 275 aa17.17■□□□□ 0.34
PABPC4-215ENST00000484555 AMOTQ4VCS5 1084 aa17.17■□□□□ 0.34
PABPC4-215ENST00000484555 DALRD3Q5D0E6 543 aaKnown RBP17.17■□□□□ 0.34
PABPC4-215ENST00000484555 C16orf71Q8IYS4 520 aaPredicted RBP17.17■□□□□ 0.34
PABPC4-215ENST00000484555 KDM2BQ8NHM5 1336 aa17.17■□□□□ 0.34
PABPC4-215ENST00000484555 CRKLP46109 303 aaKnown RBP17.15■□□□□ 0.34
PABPC4-215ENST00000484555 USP42Q9H9J4 1324 aaKnown RBP17.15■□□□□ 0.34
PABPC4-215ENST00000484555 TM4SF1P30408 202 aa17.14■□□□□ 0.33
PABPC4-215ENST00000484555 MTHFSP49914 203 aa17.14■□□□□ 0.33
PABPC4-215ENST00000484555 DDR1Q08345 913 aa17.14■□□□□ 0.33
PABPC4-215ENST00000484555 FKBP8Q14318 412 aa17.14■□□□□ 0.33
PABPC4-215ENST00000484555 ZNF530Q6P9A1 599 aaPredicted RBP17.14■□□□□ 0.33
PABPC4-215ENST00000484555 KCPQ6ZWJ8 1503 aa17.14■□□□□ 0.33
PABPC4-215ENST00000484555 PTCD1O75127 700 aaKnown RBP17.13■□□□□ 0.33
PABPC4-215ENST00000484555 RNF181Q9P0P0 153 aa17.13■□□□□ 0.33
PABPC4-215ENST00000484555 SRP68Q9UHB9 627 aaKnown RBP17.13■□□□□ 0.33
PABPC4-215ENST00000484555 SBF1O95248 1867 aa17.12■□□□□ 0.33
PABPC4-215ENST00000484555 TNNT2P45379 298 aaPredicted RBP17.12■□□□□ 0.33
PABPC4-215ENST00000484555 NFATC2IPQ8NCF5 419 aa17.12■□□□□ 0.33
PABPC4-215ENST00000484555 RRAGCQ9HB90 399 aa17.12■□□□□ 0.33
PABPC4-215ENST00000484555 TNRC6CQ9HCJ0 1690 aaKnown RBP17.12■□□□□ 0.33
PABPC4-215ENST00000484555 ZC3H4Q9UPT8 1303 aaKnown RBP17.12■□□□□ 0.33
PABPC4-215ENST00000484555 ADAMTS7Q9UKP4 1686 aa17.11■□□□□ 0.33
PABPC4-215ENST00000484555 TJP1Q07157 1748 aa17.11■□□□□ 0.33
PABPC4-215ENST00000484555 POLRMTO00411 1230 aaKnown RBP17.11■□□□□ 0.33
PABPC4-215ENST00000484555 HTRA3P83110 453 aa17.11■□□□□ 0.33
PABPC4-215ENST00000484555 INTS5Q6P9B9 1019 aaKnown RBP17.11■□□□□ 0.33
PABPC4-215ENST00000484555 TIMELESSQ9UNS1 1208 aa17.11■□□□□ 0.33
PABPC4-215ENST00000484555 CHRNA5P30532 468 aa17.1■□□□□ 0.33
PABPC4-215ENST00000484555 C1orf141Q5JVX7 400 aa17.1■□□□□ 0.33
PABPC4-215ENST00000484555 COL13A1Q5TAT6 717 aaPredicted RBP17.1■□□□□ 0.33
PABPC4-215ENST00000484555 SMC1BQ8NDV3 1235 aa17.09■□□□□ 0.33
PABPC4-215ENST00000484555 PCNTO95613 3336 aa17.08■□□□□ 0.33
PABPC4-215ENST00000484555 AEBP1Q8IUX7 1158 aa17.07■□□□□ 0.32
PABPC4-215ENST00000484555 SCN11AQ9UI33 1791 aa17.07■□□□□ 0.32
PABPC4-215ENST00000484555 SOS1Q07889 1333 aaPredicted RBP17.06■□□□□ 0.32
PABPC4-215ENST00000484555 ZPR1O75312 459 aa17.06■□□□□ 0.32
PABPC4-215ENST00000484555 USPL1Q5W0Q7 1092 aa17.06■□□□□ 0.32
PABPC4-215ENST00000484555 NRXN2Q9P2S2 1712 aa17.05■□□□□ 0.32
PABPC4-215ENST00000484555 GLTPD2A6NH11 291 aa17.05■□□□□ 0.32
PABPC4-215ENST00000484555 LMNB1P20700 586 aa17.05■□□□□ 0.32
PABPC4-215ENST00000484555 SULT6B1Q6IMI4 303 aa17.05■□□□□ 0.32
PABPC4-215ENST00000484555 PANK3Q9H999 370 aa17.05■□□□□ 0.32
PABPC4-215ENST00000484555 CYP19A1P11511 503 aaPredicted RBP17.04■□□□□ 0.32
PABPC4-215ENST00000484555 VEGFAP15692 232 aaPredicted RBP17.04■□□□□ 0.32
PABPC4-215ENST00000484555 AKAP4Q5JQC9 854 aa17.04■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 88.6 ms