RNA–Protein interactions for RNA: ENST00000483602.1

CAPN10-214, Transcript of calpain 10, humanhuman

TSL 3

Gene CAPN10, Length 543 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN10-214ENST00000483602 DCTN1Q14203 1278 aa23.73■■□□□ 1.39
CAPN10-214ENST00000483602 MCM10Q7L590 875 aa23.73■■□□□ 1.39
CAPN10-214ENST00000483602 RTF1Q92541 710 aaKnown RBP23.73■■□□□ 1.39
CAPN10-214ENST00000483602 SMARCC1Q92922 1105 aaPredicted RBP23.73■■□□□ 1.39
CAPN10-214ENST00000483602 RIPK4P57078 832 aa23.72■■□□□ 1.39
CAPN10-214ENST00000483602 LRRC4BQ9NT99 713 aa23.72■■□□□ 1.39
CAPN10-214ENST00000483602 PALLDQ8WX93 1383 aa23.72■■□□□ 1.39
CAPN10-214ENST00000483602 RREB1Q92766 1687 aa23.7■■□□□ 1.39
CAPN10-214ENST00000483602 APAF1O14727 1248 aa23.7■■□□□ 1.38
CAPN10-214ENST00000483602 RRP7AQ9Y3A4 280 aaKnown RBP23.7■■□□□ 1.38
CAPN10-214ENST00000483602 TEFQ10587 303 aa23.69■■□□□ 1.38
CAPN10-214ENST00000483602 SLC27A3Q5K4L6 730 aa23.69■■□□□ 1.38
CAPN10-214ENST00000483602 FAM9BQ8IZU0 186 aa23.68■■□□□ 1.38
CAPN10-214ENST00000483602 TRIM35Q9UPQ4 493 aa23.68■■□□□ 1.38
CAPN10-214ENST00000483602 LY75O60449 1722 aa23.67■■□□□ 1.38
CAPN10-214ENST00000483602 KCNQ4P56696 695 aa23.67■■□□□ 1.38
CAPN10-214ENST00000483602 NEUROD2Q15784 382 aa23.67■■□□□ 1.38
CAPN10-214ENST00000483602 SLC39A6Q13433 755 aa23.66■■□□□ 1.38
CAPN10-214ENST00000483602 THUMPD2Q9BTF0 503 aaKnown RBP23.66■■□□□ 1.38
CAPN10-214ENST00000483602 CCNL1Q9UK58 526 aaPredicted RBP23.66■■□□□ 1.38
CAPN10-214ENST00000483602 DLG5Q8TDM6 1919 aa23.66■■□□□ 1.38
CAPN10-214ENST00000483602 LOC102724428A0A0B4J2F2 783 aa23.65■■□□□ 1.38
CAPN10-214ENST00000483602 SIK1P57059 783 aa23.65■■□□□ 1.38
CAPN10-214ENST00000483602 SLC4A9Q96Q91 983 aa23.65■■□□□ 1.38
CAPN10-214ENST00000483602 VIRMAQ69YN4 1812 aaKnown RBP23.65■■□□□ 1.38
CAPN10-214ENST00000483602 NUP188Q5SRE5 1749 aa23.64■■□□□ 1.38
CAPN10-214ENST00000483602 LMOD3Q0VAK6 560 aa23.64■■□□□ 1.37
CAPN10-214ENST00000483602 TAF7Q15545 349 aaPredicted RBP23.64■■□□□ 1.37
CAPN10-214ENST00000483602 SIPA1L3O60292 1781 aaPredicted RBP23.63■■□□□ 1.37
CAPN10-214ENST00000483602 BTBD11A6QL63 1104 aa23.62■■□□□ 1.37
CAPN10-214ENST00000483602 ZNF790Q6PG37 636 aa23.62■■□□□ 1.37
CAPN10-214ENST00000483602 ANO8Q9HCE9 1232 aaPredicted RBP23.62■■□□□ 1.37
CAPN10-214ENST00000483602 PTCD1O75127 700 aaKnown RBP23.61■■□□□ 1.37
CAPN10-214ENST00000483602 ITPK1Q13572 414 aa23.61■■□□□ 1.37
CAPN10-214ENST00000483602 NCBP3Q53F19 620 aaKnown RBP23.61■■□□□ 1.37
CAPN10-214ENST00000483602 RBM42Q9BTD8 480 aaKnown RBP23.61■■□□□ 1.37
CAPN10-214ENST00000483602 PAPPAQ13219 1627 aa23.61■■□□□ 1.37
CAPN10-214ENST00000483602 KCNQ3O43525 872 aa23.6■■□□□ 1.37
CAPN10-214ENST00000483602 ATP6V1AP38606 617 aa23.6■■□□□ 1.37
CAPN10-214ENST00000483602 NBPF14Q5TI25 921 aa23.6■■□□□ 1.37
CAPN10-214ENST00000483602 AKT1S1Q96B36 256 aa23.59■■□□□ 1.37
CAPN10-214ENST00000483602 KCPQ6ZWJ8 1503 aa23.59■■□□□ 1.37
CAPN10-214ENST00000483602 MIS18AQ9NYP9 233 aa23.58■■□□□ 1.37
CAPN10-214ENST00000483602 SLC15A2Q16348 729 aa23.57■■□□□ 1.36
CAPN10-214ENST00000483602 ZNF827Q17R98 1081 aa23.57■■□□□ 1.36
CAPN10-214ENST00000483602 CCDC27Q2M243 656 aa23.57■■□□□ 1.36
CAPN10-214ENST00000483602 TTC5Q8N0Z6 440 aa23.57■■□□□ 1.36
CAPN10-214ENST00000483602 LINC00116Q8NCU8 138 aa23.57■■□□□ 1.36
CAPN10-214ENST00000483602 ZNF496Q96IT1 587 aaPredicted RBP23.57■■□□□ 1.36
CAPN10-214ENST00000483602 ZNF831Q5JPB2 1677 aa23.57■■□□□ 1.36
CAPN10-214ENST00000483602 SENP3-EIF4A1A0A087X0R7 540 aa23.56■■□□□ 1.36
CAPN10-214ENST00000483602 HMGB2P26583 209 aaKnown RBP23.56■■□□□ 1.36
CAPN10-214ENST00000483602 R3HDM1Q15032 1099 aaKnown RBP23.55■■□□□ 1.36
CAPN10-214ENST00000483602 VSIG10Q8N0Z9 540 aa23.55■■□□□ 1.36
CAPN10-214ENST00000483602 BABAM1Q9NWV8 329 aa23.55■■□□□ 1.36
CAPN10-214ENST00000483602 STK32BQ9NY57 414 aa23.55■■□□□ 1.36
CAPN10-214ENST00000483602 UBR2Q8IWV8 1755 aa23.53■■□□□ 1.36
CAPN10-214ENST00000483602 CHL1O00533 1208 aa23.53■■□□□ 1.36
CAPN10-214ENST00000483602 WWC1Q8IX03 1113 aa23.53■■□□□ 1.36
CAPN10-214ENST00000483602 FMNL2Q96PY5 1086 aa23.53■■□□□ 1.36
CAPN10-214ENST00000483602 HEG1Q9ULI3 1381 aa23.52■■□□□ 1.36
CAPN10-214ENST00000483602 PSDA5PKW4 1024 aaPredicted RBP23.52■■□□□ 1.36
CAPN10-214ENST00000483602 DNAJC10Q8IXB1 793 aa23.52■■□□□ 1.36
CAPN10-214ENST00000483602 CICQ96RK0 1608 aaPredicted RBP23.51■■□□□ 1.35
CAPN10-214ENST00000483602 C5P01031 1676 aa23.51■■□□□ 1.35
CAPN10-214ENST00000483602 ZNF853P0CG23 659 aa23.51■■□□□ 1.35
CAPN10-214ENST00000483602 TAF1LQ8IZX4 1826 aa23.51■■□□□ 1.35
CAPN10-214ENST00000483602 EIF4A1P60842 406 aaKnown RBP23.5■■□□□ 1.35
CAPN10-214ENST00000483602 RC3H1Q5TC82 1133 aaKnown RBP23.5■■□□□ 1.35
CAPN10-214ENST00000483602 NGEFQ8N5V2 710 aa23.5■■□□□ 1.35
CAPN10-214ENST00000483602 TSPYL4Q9UJ04 414 aa23.5■■□□□ 1.35
CAPN10-214ENST00000483602 CYP19A1P11511 503 aaPredicted RBP23.49■■□□□ 1.35
CAPN10-214ENST00000483602 CFAP44Q96MT7 982 aa23.49■■□□□ 1.35
CAPN10-214ENST00000483602 C4BP0C0L5 1744 aa23.49■■□□□ 1.35
CAPN10-214ENST00000483602 TJP1Q07157 1748 aa23.49■■□□□ 1.35
CAPN10-214ENST00000483602 KDM3BQ7LBC6 1761 aa23.48■■□□□ 1.35
CAPN10-214ENST00000483602 CALD1Q05682 793 aaKnown RBP23.48■■□□□ 1.35
CAPN10-214ENST00000483602 SALL2Q9Y467 1007 aaPredicted RBP23.48■■□□□ 1.35
CAPN10-214ENST00000483602 CNTNAP4Q9C0A0 1308 aa23.48■■□□□ 1.35
CAPN10-214ENST00000483602 AMIGO3Q86WK7 504 aa23.47■■□□□ 1.35
CAPN10-214ENST00000483602 TEX13AQ9BXU3 409 aaPredicted RBP23.47■■□□□ 1.35
CAPN10-214ENST00000483602 TFCP2L1Q9NZI6 479 aa23.47■■□□□ 1.35
CAPN10-214ENST00000483602 PRAMEF22A3QJZ6 481 aa23.46■■□□□ 1.35
CAPN10-214ENST00000483602 SNRPA1P09661 255 aaKnown RBP23.46■■□□□ 1.35
CAPN10-214ENST00000483602 CRKLP46109 303 aaKnown RBP23.46■■□□□ 1.35
CAPN10-214ENST00000483602 INTS5Q6P9B9 1019 aaKnown RBP23.46■■□□□ 1.35
CAPN10-214ENST00000483602 PNPLA7Q6ZV29 1317 aa23.46■■□□□ 1.35
CAPN10-214ENST00000483602 PDGFDQ9GZP0 370 aaPredicted RBP23.46■■□□□ 1.35
CAPN10-214ENST00000483602 IFT57Q9NWB7 429 aa23.46■■□□□ 1.35
CAPN10-214ENST00000483602 LAS1LQ9Y4W2 734 aaKnown RBP23.46■■□□□ 1.35
CAPN10-214ENST00000483602 COL5A3P25940 1745 aaPredicted RBP23.45■■□□□ 1.34
CAPN10-214ENST00000483602 AK7Q96M32 723 aa23.45■■□□□ 1.34
CAPN10-214ENST00000483602 USP16Q9Y5T5 823 aa23.45■■□□□ 1.34
CAPN10-214ENST00000483602 GIGYF1O75420 1035 aaPredicted RBP23.44■■□□□ 1.34
CAPN10-214ENST00000483602 RPS6KA4O75676 772 aa23.44■■□□□ 1.34
CAPN10-214ENST00000483602 GNAI1P63096 354 aa23.44■■□□□ 1.34
CAPN10-214ENST00000483602 SMIM5Q71RC9 77 aa23.44■■□□□ 1.34
CAPN10-214ENST00000483602 WDR63Q8IWG1 891 aa23.44■■□□□ 1.34
CAPN10-214ENST00000483602 MBIPQ9NS73 344 aa23.44■■□□□ 1.34
CAPN10-214ENST00000483602 IL16Q14005 1332 aa23.43■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms