RNA–Protein interactions for RNA: ENST00000483553.5

SKIV2L-209, Transcript of Ski2 like RNA helicase, humanhuman

TSL 5

Gene SKIV2L, Length 1,307 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKIV2L-209ENST00000483553 AMIGO3Q86WK7 504 aa21.58■■□□□ 1.05
SKIV2L-209ENST00000483553 PPP2R1AP30153 589 aa21.57■■□□□ 1.04
SKIV2L-209ENST00000483553 PIGBQ92521 554 aa21.57■■□□□ 1.04
SKIV2L-209ENST00000483553 TOGARAM1Q9Y4F4 1720 aa21.57■■□□□ 1.04
SKIV2L-209ENST00000483553 MTHFSP49914 203 aa21.56■■□□□ 1.04
SKIV2L-209ENST00000483553 NKX1-1Q15270 411 aaPredicted RBP21.56■■□□□ 1.04
SKIV2L-209ENST00000483553 PRKRIP1Q9H875 184 aaPredicted RBP21.56■■□□□ 1.04
SKIV2L-209ENST00000483553 WWC3Q9ULE0 1092 aa21.56■■□□□ 1.04
SKIV2L-209ENST00000483553 LOC102724428A0A0B4J2F2 783 aa21.55■■□□□ 1.04
SKIV2L-209ENST00000483553 KIF3CO14782 793 aa21.55■■□□□ 1.04
SKIV2L-209ENST00000483553 SIK1P57059 783 aa21.55■■□□□ 1.04
SKIV2L-209ENST00000483553 PKD1L3Q7Z443 1732 aa21.54■■□□□ 1.04
SKIV2L-209ENST00000483553 SMIM5Q71RC9 77 aa21.54■■□□□ 1.04
SKIV2L-209ENST00000483553 SPG7Q9UQ90 795 aa21.54■■□□□ 1.04
SKIV2L-209ENST00000483553 LINC00116Q8NCU8 138 aa21.53■■□□□ 1.04
SKIV2L-209ENST00000483553 ANP32CO43423 234 aa21.52■■□□□ 1.03
SKIV2L-209ENST00000483553 MYBBP1AQ9BQG0 1328 aaKnown RBP21.51■■□□□ 1.03
SKIV2L-209ENST00000483553 APLP1P51693 650 aa21.51■■□□□ 1.03
SKIV2L-209ENST00000483553 TMOD3Q9NYL9 352 aa21.51■■□□□ 1.03
SKIV2L-209ENST00000483553 COL3A1P02461 1466 aaPredicted RBP21.5■■□□□ 1.03
SKIV2L-209ENST00000483553 GNPATO15228 680 aa21.5■■□□□ 1.03
SKIV2L-209ENST00000483553 CICQ96RK0 1608 aaPredicted RBP21.5■■□□□ 1.03
SKIV2L-209ENST00000483553 NCAPD2Q15021 1401 aa21.49■■□□□ 1.03
SKIV2L-209ENST00000483553 ATP6V1AP38606 617 aa21.49■■□□□ 1.03
SKIV2L-209ENST00000483553 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP21.49■■□□□ 1.036e-7■■■□□ 15.7
SKIV2L-209ENST00000483553 MMP10P09238 476 aa21.48■■□□□ 1.03
SKIV2L-209ENST00000483553 TGFB2P61812 414 aa21.48■■□□□ 1.03
SKIV2L-209ENST00000483553 DIEXFQ68CQ4 756 aaKnown RBP21.48■■□□□ 1.03
SKIV2L-209ENST00000483553 ASAP1Q9ULH1 1129 aa21.48■■□□□ 1.03
SKIV2L-209ENST00000483553 TOMM70O94826 608 aa21.47■■□□□ 1.03
SKIV2L-209ENST00000483553 ITPK1Q13572 414 aa21.47■■□□□ 1.03
SKIV2L-209ENST00000483553 EIF4A2Q14240 407 aaKnown RBP21.47■■□□□ 1.03
SKIV2L-209ENST00000483553 KIF13BQ9NQT8 1826 aa21.46■■□□□ 1.03
SKIV2L-209ENST00000483553 CFAP53Q96M91 514 aa21.46■■□□□ 1.03
SKIV2L-209ENST00000483553 PXDNLA1KZ92 1463 aa21.45■■□□□ 1.02
SKIV2L-209ENST00000483553 IFNL2Q8IZJ0 200 aa21.45■■□□□ 1.02
SKIV2L-209ENST00000483553 TRAPPC3LQ5T215 181 aa21.44■■□□□ 1.02
SKIV2L-209ENST00000483553 NLGN1Q8N2Q7 840 aa21.44■■□□□ 1.02
SKIV2L-209ENST00000483553 BCS1LQ9Y276 419 aa21.44■■□□□ 1.02
SKIV2L-209ENST00000483553 PHKG2P15735 406 aa21.43■■□□□ 1.02
SKIV2L-209ENST00000483553 EYA1Q99502 592 aa21.43■■□□□ 1.02
SKIV2L-209ENST00000483553 ATG3Q9NT62 314 aa21.43■■□□□ 1.02
SKIV2L-209ENST00000483553 RTCBQ9Y3I0 505 aaKnown RBP21.43■■□□□ 1.02
SKIV2L-209ENST00000483553 N4BP2Q86UW6 1770 aaPredicted RBP21.42■■□□□ 1.02
SKIV2L-209ENST00000483553 A0A0G2JLW4 131 aa21.42■■□□□ 1.02
SKIV2L-209ENST00000483553 DIAPH1O60610 1272 aaKnown RBP21.42■■□□□ 1.02
SKIV2L-209ENST00000483553 IL13P35225 146 aa21.42■■□□□ 1.02
SKIV2L-209ENST00000483553 DNAJC5GQ8N7S2 189 aa21.42■■□□□ 1.02
SKIV2L-209ENST00000483553 ARHGAP27Q6ZUM4 889 aa21.41■■□□□ 1.02
SKIV2L-209ENST00000483553 KIAA1551Q9HCM1 1747 aa21.41■■□□□ 1.02
SKIV2L-209ENST00000483553 ADRA2BP18089 450 aa21.4■■□□□ 1.02
SKIV2L-209ENST00000483553 CCDC87Q9NVE4 849 aa21.4■■□□□ 1.02
SKIV2L-209ENST00000483553 RC3H1Q5TC82 1133 aaKnown RBP21.39■■□□□ 1.01
SKIV2L-209ENST00000483553 C10orf71Q711Q0 1435 aa21.39■■□□□ 1.01
SKIV2L-209ENST00000483553 PLEKHG2Q9H7P9 1386 aa21.38■■□□□ 1.01
SKIV2L-209ENST00000483553 ZNF831Q5JPB2 1677 aa21.37■■□□□ 1.01
SKIV2L-209ENST00000483553 FCHSD2O94868 740 aa21.37■■□□□ 1.01
SKIV2L-209ENST00000483553 ARHGEF1Q92888 912 aaKnown RBP21.37■■□□□ 1.01
SKIV2L-209ENST00000483553 NMRK2Q9NPI5 230 aa21.37■■□□□ 1.01
SKIV2L-209ENST00000483553 KDRP35968 1356 aa21.37■■□□□ 1.01
SKIV2L-209ENST00000483553 ERVV-2B6SEH9 535 aa21.36■■□□□ 1.01
SKIV2L-209ENST00000483553 DPEP1P16444 411 aa21.36■■□□□ 1.01
SKIV2L-209ENST00000483553 RBM46Q8TBY0 533 aaKnown RBP21.36■■□□□ 1.01
SKIV2L-209ENST00000483553 PARP3Q9Y6F1 533 aa21.36■■□□□ 1.01
SKIV2L-209ENST00000483553 GYS1P13807 737 aa21.35■■□□□ 1.01
SKIV2L-209ENST00000483553 RFC4P35249 363 aa21.35■■□□□ 1.01
SKIV2L-209ENST00000483553 CCDC184Q52MB2 194 aa21.35■■□□□ 1.01
SKIV2L-209ENST00000483553 RBM42Q9BTD8 480 aaKnown RBP21.35■■□□□ 1.01
SKIV2L-209ENST00000483553 BRCA1P38398 1863 aaKnown RBP21.34■■□□□ 1.01
SKIV2L-209ENST00000483553 C4AP0C0L4 1744 aa21.34■■□□□ 1.01
SKIV2L-209ENST00000483553 CNTNAP4Q9C0A0 1308 aa21.34■■□□□ 1.01
SKIV2L-209ENST00000483553 U2SURPO15042 1029 aaKnown RBP21.34■■□□□ 1.01
SKIV2L-209ENST00000483553 RPS6KA4O75676 772 aa21.34■■□□□ 1.01
SKIV2L-209ENST00000483553 HSP90AB1P08238 724 aaKnown RBP21.34■■□□□ 1.01
SKIV2L-209ENST00000483553 C16orf71Q8IYS4 520 aaPredicted RBP21.34■■□□□ 1.01
SKIV2L-209ENST00000483553 SLC4A9Q96Q91 983 aa21.34■■□□□ 1.01
SKIV2L-209ENST00000483553 NUDCQ9Y266 331 aa21.34■■□□□ 1.01
SKIV2L-209ENST00000483553 C9orf131Q5VYM1 1079 aa21.32■■□□□ 1
SKIV2L-209ENST00000483553 DCAF5Q96JK2 942 aa21.32■■□□□ 1
SKIV2L-209ENST00000483553 WDR90Q96KV7 1748 aa21.32■■□□□ 1
SKIV2L-209ENST00000483553 ARFGEF1Q9Y6D6 1849 aa21.32■■□□□ 1
SKIV2L-209ENST00000483553 COL5A3P25940 1745 aaPredicted RBP21.32■■□□□ 1
SKIV2L-209ENST00000483553 KCNA3P22001 575 aa21.31■■□□□ 1
SKIV2L-209ENST00000483553 SULT6B1Q6IMI4 303 aa21.31■■□□□ 1
SKIV2L-209ENST00000483553 AEBP1Q8IUX7 1158 aa21.31■■□□□ 1
SKIV2L-209ENST00000483553 PIM2Q9P1W9 311 aa21.31■■□□□ 1
SKIV2L-209ENST00000483553 HMOX1P09601 288 aa21.3■■□□□ 1
SKIV2L-209ENST00000483553 FSTL1Q12841 308 aa21.3■■□□□ 1
SKIV2L-209ENST00000483553 KDM2BQ8NHM5 1336 aa21.3■■□□□ 1
SKIV2L-209ENST00000483553 U2AF1L5P0DN76 240 aaPredicted RBP21.29■■□□□ 1
SKIV2L-209ENST00000483553 U2AF1Q01081 240 aaKnown RBP eCLIP21.29■■□□□ 11e-11■□□□□ 10.3
SKIV2L-209ENST00000483553 KLRG1Q96E93 195 aa21.29■■□□□ 1
SKIV2L-209ENST00000483553 MRS2Q9HD23 443 aa21.29■■□□□ 1
SKIV2L-209ENST00000483553 PLEKHO1Q53GL0 409 aaPredicted RBP21.29■■□□□ 1
SKIV2L-209ENST00000483553 MIER1Q8N108 512 aa21.29■■□□□ 1
SKIV2L-209ENST00000483553 VIRMAQ69YN4 1812 aaKnown RBP21.28■■□□□ 1
SKIV2L-209ENST00000483553 MYH14Q7Z406 1995 aaKnown RBP21.28■■□□□ 1
SKIV2L-209ENST00000483553 CABP4P57796 275 aa21.28■■□□□ 1
SKIV2L-209ENST00000483553 DALRD3Q5D0E6 543 aaKnown RBP21.28■■□□□ 1
SKIV2L-209ENST00000483553 JMYQ8N9B5 988 aa21.27■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 110.6 ms