RNA–Protein interactions for RNA: ENST00000483412.5

CDK5RAP2-216, Transcript of CDK5 regulatory subunit associated protein 2, humanhuman

TSL 1 (best)

Gene CDK5RAP2, Length 6,235 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP2-216ENST00000483412 KIF2AO00139 706 aaPredicted RBP11.22□□□□□ -0.61
CDK5RAP2-216ENST00000483412 SSFA2P28290 1259 aa11.22□□□□□ -0.61
CDK5RAP2-216ENST00000483412 ARHGAP29Q52LW3 1261 aa11.22□□□□□ -0.61
CDK5RAP2-216ENST00000483412 SYCP2Q9BX26 1530 aa11.22□□□□□ -0.61
CDK5RAP2-216ENST00000483412 KIF18AQ8NI77 898 aa11.22□□□□□ -0.61
CDK5RAP2-216ENST00000483412 NUDT16Q96DE0 195 aaKnown RBP11.22□□□□□ -0.61
CDK5RAP2-216ENST00000483412 CRACR2AQ9BSW2 395 aa11.22□□□□□ -0.61
CDK5RAP2-216ENST00000483412 SIL1Q9H173 461 aa11.22□□□□□ -0.61
CDK5RAP2-216ENST00000483412 STRN4Q9NRL3 753 aa11.22□□□□□ -0.61
CDK5RAP2-216ENST00000483412 PLEKHO1Q53GL0 409 aaPredicted RBP11.21□□□□□ -0.61
CDK5RAP2-216ENST00000483412 TNPO1Q92973 898 aaKnown RBP11.21□□□□□ -0.61
CDK5RAP2-216ENST00000483412 GBP3Q9H0R5 595 aa11.21□□□□□ -0.61
CDK5RAP2-216ENST00000483412 CCDC69A6NI79 296 aa11.21□□□□□ -0.61
CDK5RAP2-216ENST00000483412 TNNT1P13805 278 aa11.21□□□□□ -0.61
CDK5RAP2-216ENST00000483412 CASTP20810 708 aaKnown RBP11.21□□□□□ -0.61
CDK5RAP2-216ENST00000483412 GTF2F1P35269 517 aaKnown RBP eCLIP11.21□□□□□ -0.611e-8■■■■□ 22
CDK5RAP2-216ENST00000483412 GPATCH11Q8N954 259 aa11.21□□□□□ -0.61
CDK5RAP2-216ENST00000483412 SRCIN1Q9C0H9 1055 aa11.21□□□□□ -0.61
CDK5RAP2-216ENST00000483412 CLIP2Q9UDT6 1046 aa11.21□□□□□ -0.61
CDK5RAP2-216ENST00000483412 KDM5BQ9UGL1 1544 aa11.21□□□□□ -0.61
CDK5RAP2-216ENST00000483412 TRIM22Q8IYM9 498 aa11.21□□□□□ -0.62
CDK5RAP2-216ENST00000483412 NSD3Q9BZ95 1437 aa11.21□□□□□ -0.62
CDK5RAP2-216ENST00000483412 URI1O94763 535 aaPredicted RBP11.21□□□□□ -0.62
CDK5RAP2-216ENST00000483412 SFPQP23246 707 aaKnown RBP eCLIP11.2□□□□□ -0.62
CDK5RAP2-216ENST00000483412 SULT6B1Q6IMI4 303 aa11.2□□□□□ -0.62
CDK5RAP2-216ENST00000483412 USP25Q9UHP3 1055 aa11.2□□□□□ -0.62
CDK5RAP2-216ENST00000483412 DYDC1Q8WWB3 177 aa11.2□□□□□ -0.62
CDK5RAP2-216ENST00000483412 ZNF428Q96B54 188 aa11.2□□□□□ -0.62
CDK5RAP2-216ENST00000483412 C16orf45Q96MC5 204 aaPredicted RBP11.2□□□□□ -0.62
CDK5RAP2-216ENST00000483412 IKQ13123 557 aaPredicted RBP11.2□□□□□ -0.62
CDK5RAP2-216ENST00000483412 CCDC158Q5M9N0 1113 aa11.2□□□□□ -0.62
CDK5RAP2-216ENST00000483412 ANKRD18AQ8IVF6 992 aa11.2□□□□□ -0.62
CDK5RAP2-216ENST00000483412 TBC1D2Q9BYX2 928 aa11.2□□□□□ -0.62
CDK5RAP2-216ENST00000483412 TMX1Q9H3N1 280 aa11.2□□□□□ -0.62
CDK5RAP2-216ENST00000483412 ZSCAN12O43309 604 aa11.2□□□□□ -0.62
CDK5RAP2-216ENST00000483412 NOS1P29475 1434 aa11.2□□□□□ -0.62
CDK5RAP2-216ENST00000483412 TEX14Q8IWB6 1497 aa11.2□□□□□ -0.62
CDK5RAP2-216ENST00000483412 CNKSR2Q8WXI2 1034 aa11.2□□□□□ -0.62
CDK5RAP2-216ENST00000483412 RRS1Q15050 365 aaKnown RBP11.19□□□□□ -0.62
CDK5RAP2-216ENST00000483412 CCDC83Q8IWF9 413 aa11.19□□□□□ -0.62
CDK5RAP2-216ENST00000483412 DDX11Q96FC9 970 aa11.19□□□□□ -0.62
CDK5RAP2-216ENST00000483412 TICAM2Q86XR7 235 aa11.19□□□□□ -0.62
CDK5RAP2-216ENST00000483412 ZHX3Q9H4I2 956 aa11.19□□□□□ -0.62
CDK5RAP2-216ENST00000483412 TRMT1Q9NXH9 659 aaKnown RBP11.19□□□□□ -0.62
CDK5RAP2-216ENST00000483412 AACSQ86V21 672 aa11.19□□□□□ -0.62
CDK5RAP2-216ENST00000483412 NUP133Q8WUM0 1156 aa11.19□□□□□ -0.62
CDK5RAP2-216ENST00000483412 CCDC61Q9Y6R9 512 aa11.19□□□□□ -0.62
CDK5RAP2-216ENST00000483412 SLC3A2P08195 630 aaKnown RBP11.19□□□□□ -0.62
CDK5RAP2-216ENST00000483412 SEPT11Q9NVA2 429 aaKnown RBP11.19□□□□□ -0.62
CDK5RAP2-216ENST00000483412 DUOX2Q9NRD8 1548 aa11.19□□□□□ -0.62
CDK5RAP2-216ENST00000483412 C20orf194Q5TEA3 1177 aa11.19□□□□□ -0.62
CDK5RAP2-216ENST00000483412 TMEM57Q8N5G2 664 aa11.19□□□□□ -0.62
CDK5RAP2-216ENST00000483412 PTPRKQ15262 1439 aa11.18□□□□□ -0.62
CDK5RAP2-216ENST00000483412 TATP17735 454 aaPredicted RBP11.18□□□□□ -0.62
CDK5RAP2-216ENST00000483412 SLFN5Q08AF3 891 aa11.18□□□□□ -0.62
CDK5RAP2-216ENST00000483412 FERMT3Q86UX7 667 aa11.18□□□□□ -0.62
CDK5RAP2-216ENST00000483412 DDX24Q9GZR7 859 aaKnown RBP eCLIP11.18□□□□□ -0.622e-6■■□□□ 12.1
CDK5RAP2-216ENST00000483412 RPRD2Q5VT52 1461 aaKnown RBP11.18□□□□□ -0.62
CDK5RAP2-216ENST00000483412 NOL7Q9UMY1 257 aaKnown RBP11.18□□□□□ -0.62
CDK5RAP2-216ENST00000483412 DYNC1I1O14576 645 aa11.18□□□□□ -0.62
CDK5RAP2-216ENST00000483412 EIF5P55010 431 aaKnown RBP11.18□□□□□ -0.62
CDK5RAP2-216ENST00000483412 TAF4BQ92750 862 aa11.18□□□□□ -0.62
CDK5RAP2-216ENST00000483412 KIF5CO60282 957 aa11.17□□□□□ -0.62
CDK5RAP2-216ENST00000483412 MAP9Q49MG5 647 aa11.17□□□□□ -0.62
CDK5RAP2-216ENST00000483412 IL1RAPL2Q9NP60 686 aa11.17□□□□□ -0.62
CDK5RAP2-216ENST00000483412 JAKMIP3Q5VZ66 844 aa11.17□□□□□ -0.62
CDK5RAP2-216ENST00000483412 ZNF518AQ6AHZ1 1483 aa11.17□□□□□ -0.62
CDK5RAP2-216ENST00000483412 NUP160Q12769 1436 aa11.17□□□□□ -0.62
CDK5RAP2-216ENST00000483412 GBP2P32456 591 aaPredicted RBP11.17□□□□□ -0.62
CDK5RAP2-216ENST00000483412 RNF187Q5TA31 235 aaPredicted RBP11.17□□□□□ -0.62
CDK5RAP2-216ENST00000483412 ANO10Q9NW15 660 aa11.17□□□□□ -0.62
CDK5RAP2-216ENST00000483412 NUTM2BA6NNL0 878 aaPredicted RBP11.17□□□□□ -0.62
CDK5RAP2-216ENST00000483412 NUTM2EB1AL46 878 aaPredicted RBP11.17□□□□□ -0.62
CDK5RAP2-216ENST00000483412 CDKL5O76039 1030 aa11.17□□□□□ -0.62
CDK5RAP2-216ENST00000483412 MAP2K1Q02750 393 aaPredicted RBP11.17□□□□□ -0.62
CDK5RAP2-216ENST00000483412 HDGFL1Q5TGJ6 251 aa11.17□□□□□ -0.62
CDK5RAP2-216ENST00000483412 NUTM2AQ8IVF1 878 aaPredicted RBP11.17□□□□□ -0.62
CDK5RAP2-216ENST00000483412 ADCY5O95622 1261 aa11.16□□□□□ -0.62
CDK5RAP2-216ENST00000483412 TOM1L2Q6ZVM7 507 aa11.16□□□□□ -0.62
CDK5RAP2-216ENST00000483412 NUTM1Q86Y26 1132 aa11.16□□□□□ -0.62
CDK5RAP2-216ENST00000483412 CFAP43Q8NDM7 1665 aa11.16□□□□□ -0.62
CDK5RAP2-216ENST00000483412 A2MP01023 1474 aa11.16□□□□□ -0.62
CDK5RAP2-216ENST00000483412 AMOTL2Q9Y2J4 779 aa11.16□□□□□ -0.62
CDK5RAP2-216ENST00000483412 ABCA5Q8WWZ7 1642 aa11.16□□□□□ -0.62
CDK5RAP2-216ENST00000483412 KIF4BQ2VIQ3 1234 aa11.16□□□□□ -0.62
CDK5RAP2-216ENST00000483412 RBM27Q9P2N5 1060 aaKnown RBP11.16□□□□□ -0.62
CDK5RAP2-216ENST00000483412 TRAPPC8Q9Y2L5 1435 aa11.16□□□□□ -0.62
CDK5RAP2-216ENST00000483412 FAM177BA6PVY3 158 aa11.16□□□□□ -0.62
CDK5RAP2-216ENST00000483412 TMEM132AQ24JP5 1023 aa11.16□□□□□ -0.62
CDK5RAP2-216ENST00000483412 ZFP91Q96JP5 570 aaPredicted RBP11.16□□□□□ -0.62
CDK5RAP2-216ENST00000483412 CNNM1Q9NRU3 951 aa11.16□□□□□ -0.62
CDK5RAP2-216ENST00000483412 SMARCA5O60264 1052 aaPredicted RBP11.15□□□□□ -0.62
CDK5RAP2-216ENST00000483412 TOP1P11387 765 aaKnown RBP11.15□□□□□ -0.62
CDK5RAP2-216ENST00000483412 IPO4Q8TEX9 1081 aaKnown RBP11.15□□□□□ -0.62
CDK5RAP2-216ENST00000483412 MCM5P33992 734 aa11.15□□□□□ -0.62
CDK5RAP2-216ENST00000483412 CKAP2LQ8IYA6 745 aa11.15□□□□□ -0.62
CDK5RAP2-216ENST00000483412 RAI14Q9P0K7 980 aa11.15□□□□□ -0.62
CDK5RAP2-216ENST00000483412 KRT32Q14532 448 aa11.15□□□□□ -0.62
CDK5RAP2-216ENST00000483412 CCDC113Q9H0I3 377 aa11.15□□□□□ -0.62
CDK5RAP2-216ENST00000483412 SRGAP3O43295 1099 aa11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms