RNA–Protein interactions for RNA: ENST00000482158.1

SF3B1-210, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 772 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-210ENST00000482158 ATP2B4P23634 1241 aa10.49□□□□□ -0.73
SF3B1-210ENST00000482158 PTGIRP43119 386 aa10.49□□□□□ -0.73
SF3B1-210ENST00000482158 MEIOBQ8N635 442 aa10.49□□□□□ -0.73
SF3B1-210ENST00000482158 HINFPQ9BQA5 517 aa10.49□□□□□ -0.73
SF3B1-210ENST00000482158 WEE1P30291 646 aa10.48□□□□□ -0.73
SF3B1-210ENST00000482158 SCNN1AP37088 669 aa10.48□□□□□ -0.73
SF3B1-210ENST00000482158 KCNA1Q09470 495 aa10.48□□□□□ -0.73
SF3B1-210ENST00000482158 BACH1O14867 736 aa10.47□□□□□ -0.73
SF3B1-210ENST00000482158 FOXK2Q01167 660 aa10.47□□□□□ -0.73
SF3B1-210ENST00000482158 RELBQ01201 579 aa10.47□□□□□ -0.73
SF3B1-210ENST00000482158 CLN3Q13286 438 aa10.47□□□□□ -0.73
SF3B1-210ENST00000482158 ESCO1Q5FWF5 840 aa10.47□□□□□ -0.73
SF3B1-210ENST00000482158 GAS2L2Q8NHY3 880 aa10.47□□□□□ -0.73
SF3B1-210ENST00000482158 CNKSR1Q969H4 720 aa10.47□□□□□ -0.73
SF3B1-210ENST00000482158 ESYT1Q9BSJ8 1104 aa10.47□□□□□ -0.73
SF3B1-210ENST00000482158 CXXC1Q9P0U4 656 aaPredicted RBP10.47□□□□□ -0.73
SF3B1-210ENST00000482158 C21orf2O43822 256 aa10.46□□□□□ -0.73
SF3B1-210ENST00000482158 AVPP01185 164 aa10.46□□□□□ -0.73
SF3B1-210ENST00000482158 SMTNP53814 917 aa10.46□□□□□ -0.73
SF3B1-210ENST00000482158 MTFR1Q15390 333 aa10.46□□□□□ -0.73
SF3B1-210ENST00000482158 PURBQ96QR8 312 aaKnown RBP10.46□□□□□ -0.73
SF3B1-210ENST00000482158 ZNF395Q9H8N7 513 aaPredicted RBP10.46□□□□□ -0.73
SF3B1-210ENST00000482158 ZBTB7CA1YPR0 619 aa10.45□□□□□ -0.74
SF3B1-210ENST00000482158 CAPN5O15484 640 aaPredicted RBP10.45□□□□□ -0.74
SF3B1-210ENST00000482158 TXNDC2Q86VQ3 553 aa10.45□□□□□ -0.74
SF3B1-210ENST00000482158 C1orf216Q8TAB5 229 aa10.45□□□□□ -0.74
SF3B1-210ENST00000482158 FHDC1Q9C0D6 1143 aaPredicted RBP10.45□□□□□ -0.74
SF3B1-210ENST00000482158 USP3Q9Y6I4 520 aa10.45□□□□□ -0.74
SF3B1-210ENST00000482158 FAM187AA6NFU0 413 aa10.44□□□□□ -0.74
SF3B1-210ENST00000482158 A6NJY4 79 aa10.44□□□□□ -0.74
SF3B1-210ENST00000482158 B4GALNT3Q6L9W6 998 aa10.44□□□□□ -0.74
SF3B1-210ENST00000482158 TAS1R3Q7RTX0 852 aa10.44□□□□□ -0.74
SF3B1-210ENST00000482158 TSPAN10Q9H1Z9 355 aaPredicted RBP10.44□□□□□ -0.74
SF3B1-210ENST00000482158 SCHIP1Q9P0W5 487 aaPredicted RBP10.44□□□□□ -0.74
SF3B1-210ENST00000482158 IQSEC3Q9UPP2 1182 aaPredicted RBP10.44□□□□□ -0.74
SF3B1-210ENST00000482158 CENPCQ03188 943 aa10.43□□□□□ -0.74
SF3B1-210ENST00000482158 GNEQ9Y223 722 aaKnown RBP10.43□□□□□ -0.74
SF3B1-210ENST00000482158 MEN1O00255 615 aa10.42□□□□□ -0.74
SF3B1-210ENST00000482158 IGFBP4P22692 258 aa10.42□□□□□ -0.74
SF3B1-210ENST00000482158 FKBP5Q13451 457 aaPredicted RBP10.42□□□□□ -0.74
SF3B1-210ENST00000482158 TBCELQ5QJ74 424 aa10.42□□□□□ -0.74
SF3B1-210ENST00000482158 ZNF295-AS1Q8N0V1 137 aa10.42□□□□□ -0.74
SF3B1-210ENST00000482158 SCG3Q8WXD2 468 aaKnown RBP10.42□□□□□ -0.74
SF3B1-210ENST00000482158 IVNS1ABPQ9Y6Y0 642 aa10.42□□□□□ -0.74
SF3B1-210ENST00000482158 ATAD2Q6PL18 1390 aa10.41□□□□□ -0.74
SF3B1-210ENST00000482158 GFRA3O60609 400 aa10.41□□□□□ -0.74
SF3B1-210ENST00000482158 TLR1Q15399 786 aa10.41□□□□□ -0.74
SF3B1-210ENST00000482158 CAPN12Q6ZSI9 719 aa10.41□□□□□ -0.74
SF3B1-210ENST00000482158 SLC9A9Q8IVB4 645 aa10.41□□□□□ -0.74
SF3B1-210ENST00000482158 LINC00528Q8N1L1 170 aa10.41□□□□□ -0.74
SF3B1-210ENST00000482158 TSEN34Q9BSV6 310 aaKnown RBP10.41□□□□□ -0.74
SF3B1-210ENST00000482158 NRG2O14511 850 aaPredicted RBP10.4□□□□□ -0.74
SF3B1-210ENST00000482158 CDK2AP1O14519 115 aa10.4□□□□□ -0.74
SF3B1-210ENST00000482158 SPINT1O43278 529 aa10.4□□□□□ -0.74
SF3B1-210ENST00000482158 INSM2Q96T92 566 aaPredicted RBP10.4□□□□□ -0.74
SF3B1-210ENST00000482158 PATL2C9JE40 543 aaKnown RBP10.39□□□□□ -0.75
SF3B1-210ENST00000482158 DGAT1O75907 488 aa10.39□□□□□ -0.75
SF3B1-210ENST00000482158 ARID4AP29374 1257 aaPredicted RBP10.39□□□□□ -0.75
SF3B1-210ENST00000482158 SMCPP49901 116 aaPredicted RBP10.39□□□□□ -0.75
SF3B1-210ENST00000482158 NLRP3Q96P20 1036 aa10.39□□□□□ -0.75
SF3B1-210ENST00000482158 RNF144AP50876 292 aaPredicted RBP10.38□□□□□ -0.75
SF3B1-210ENST00000482158 FOXD4L5Q5VV16 416 aaPredicted RBP10.38□□□□□ -0.75
SF3B1-210ENST00000482158 MRPL14Q6P1L8 145 aaKnown RBP10.38□□□□□ -0.75
SF3B1-210ENST00000482158 GRIP2Q9C0E4 1043 aa10.38□□□□□ -0.75
SF3B1-210ENST00000482158 GZF1Q9H116 711 aaPredicted RBP10.38□□□□□ -0.75
SF3B1-210ENST00000482158 PODXL2Q9NZ53 605 aa10.38□□□□□ -0.75
SF3B1-210ENST00000482158 FOXO3O43524 673 aa10.37□□□□□ -0.75
SF3B1-210ENST00000482158 CTSOP43234 321 aaPredicted RBP10.37□□□□□ -0.75
SF3B1-210ENST00000482158 POTEAQ6S8J7 498 aa10.37□□□□□ -0.75
SF3B1-210ENST00000482158 TRIM46Q7Z4K8 759 aa10.37□□□□□ -0.75
SF3B1-210ENST00000482158 PPARGC1BQ86YN6 1023 aaKnown RBP10.37□□□□□ -0.75
SF3B1-210ENST00000482158 SEPT3Q9UH03 358 aa10.37□□□□□ -0.75
SF3B1-210ENST00000482158 BMP1P13497 986 aa10.36□□□□□ -0.75
SF3B1-210ENST00000482158 GPC1P35052 558 aa10.36□□□□□ -0.75
SF3B1-210ENST00000482158 SERPINB4P48594 390 aa10.36□□□□□ -0.75
SF3B1-210ENST00000482158 STAG2Q8N3U4 1231 aa10.36□□□□□ -0.75
SF3B1-210ENST00000482158 ZDHHC1Q8WTX9 485 aa10.36□□□□□ -0.75
SF3B1-210ENST00000482158 MKNK1Q9BUB5 465 aa10.36□□□□□ -0.75
SF3B1-210ENST00000482158 C2orf49Q9BVC5 232 aaPredicted RBP10.36□□□□□ -0.75
SF3B1-210ENST00000482158 PPP1R12BO60237 982 aaPredicted RBP10.35□□□□□ -0.75
SF3B1-210ENST00000482158 CTC1Q2NKJ3 1217 aa10.35□□□□□ -0.75
SF3B1-210ENST00000482158 PKDCCQ504Y2 493 aa10.35□□□□□ -0.75
SF3B1-210ENST00000482158 CRIPAKQ8N1N5 446 aa10.35□□□□□ -0.75
SF3B1-210ENST00000482158 CCER1Q8TC90 406 aaPredicted RBP10.35□□□□□ -0.75
SF3B1-210ENST00000482158 CHMP7Q8WUX9 453 aaPredicted RBP10.35□□□□□ -0.75
SF3B1-210ENST00000482158 ZSCAN10Q96SZ4 725 aaPredicted RBP10.35□□□□□ -0.75
SF3B1-210ENST00000482158 BMP2P12643 396 aa10.34□□□□□ -0.75
SF3B1-210ENST00000482158 C6orf118Q5T5N4 469 aa10.34□□□□□ -0.75
SF3B1-210ENST00000482158 SH3PXD2AQ5TCZ1 1133 aa10.34□□□□□ -0.75
SF3B1-210ENST00000482158 COL26A1Q96A83 441 aa10.34□□□□□ -0.75
SF3B1-210ENST00000482158 EML1O00423 815 aa10.33□□□□□ -0.76
SF3B1-210ENST00000482158 PSMA6P60900 246 aaKnown RBP10.33□□□□□ -0.76
SF3B1-210ENST00000482158 TEAD4Q15561 434 aa10.33□□□□□ -0.76
SF3B1-210ENST00000482158 POLMQ9NP87 494 aaPredicted RBP10.33□□□□□ -0.76
SF3B1-210ENST00000482158 UPP2O95045 317 aa10.32□□□□□ -0.76
SF3B1-210ENST00000482158 RNF217Q8TC41 542 aa10.32□□□□□ -0.76
SF3B1-210ENST00000482158 AXIN1O15169 862 aa10.31□□□□□ -0.76
SF3B1-210ENST00000482158 PTCD1O75127 700 aaKnown RBP10.31□□□□□ -0.76
SF3B1-210ENST00000482158 NOS2P35228 1153 aa10.31□□□□□ -0.76
SF3B1-210ENST00000482158 NAA30Q147X3 362 aaPredicted RBP10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms