RNA–Protein interactions for RNA: ENST00000481849.5

HLA-B-253, Transcript of major histocompatibility complex, class I, B, humanhuman

Gene HLA-B, Length 753 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-B-253ENST00000481849 LSM11P83369 360 aaKnown RBP eCLIP12.78□□□□□ -0.36
HLA-B-253ENST00000481849 WWC3Q9ULE0 1092 aa12.78□□□□□ -0.36
HLA-B-253ENST00000481849 AXIN2Q9Y2T1 843 aa12.78□□□□□ -0.36
HLA-B-253ENST00000481849 THRAP3Q9Y2W1 955 aaKnown RBP12.78□□□□□ -0.36
HLA-B-253ENST00000481849 AATKQ6ZMQ8 1374 aa12.78□□□□□ -0.36
HLA-B-253ENST00000481849 CRB1P82279 1406 aa12.78□□□□□ -0.36
HLA-B-253ENST00000481849 CSB-PGBD3P0DP91 1061 aa12.77□□□□□ -0.37
HLA-B-253ENST00000481849 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.77□□□□□ -0.37
HLA-B-253ENST00000481849 DNAJC5GQ8N7S2 189 aa12.77□□□□□ -0.37
HLA-B-253ENST00000481849 TMC1Q8TDI8 760 aa12.77□□□□□ -0.37
HLA-B-253ENST00000481849 KTN1Q86UP2 1357 aaKnown RBP12.77□□□□□ -0.37
HLA-B-253ENST00000481849 DISP2A7MBM2 1401 aa12.77□□□□□ -0.37
HLA-B-253ENST00000481849 SLIT3O75094 1523 aa12.77□□□□□ -0.37
HLA-B-253ENST00000481849 RGPD1P0DJD0 1748 aa12.76□□□□□ -0.37
HLA-B-253ENST00000481849 KCNQ2O43526 872 aa12.76□□□□□ -0.37
HLA-B-253ENST00000481849 TONSLQ96HA7 1378 aa12.76□□□□□ -0.37
HLA-B-253ENST00000481849 CPSF1Q10570 1443 aaKnown RBP12.75□□□□□ -0.37
HLA-B-253ENST00000481849 DDB1Q16531 1140 aa12.75□□□□□ -0.37
HLA-B-253ENST00000481849 ARHGEF25Q86VW2 580 aa12.75□□□□□ -0.37
HLA-B-253ENST00000481849 KCNH5Q8NCM2 988 aa12.75□□□□□ -0.37
HLA-B-253ENST00000481849 TTC21AQ8NDW8 1320 aa12.75□□□□□ -0.37
HLA-B-253ENST00000481849 TNS1Q9HBL0 1735 aaKnown RBP12.74□□□□□ -0.37
HLA-B-253ENST00000481849 PIK3C2AO00443 1686 aa12.74□□□□□ -0.37
HLA-B-253ENST00000481849 WDR17Q8IZU2 1322 aa12.74□□□□□ -0.37
HLA-B-253ENST00000481849 NME9Q86XW9 330 aa12.74□□□□□ -0.37
HLA-B-253ENST00000481849 SLC12A5Q9H2X9 1139 aa12.73□□□□□ -0.37
HLA-B-253ENST00000481849 OVOS2A0A0G2JMS6 1433 aa12.71□□□□□ -0.37
HLA-B-253ENST00000481849 OVOS2A0A0J9YW53 1432 aa12.71□□□□□ -0.37
HLA-B-253ENST00000481849 OVOS2Q6IE36 1432 aa12.71□□□□□ -0.37
HLA-B-253ENST00000481849 PARD3Q8TEW0 1356 aa12.71□□□□□ -0.37
HLA-B-253ENST00000481849 FAM161AQ3B820 660 aa12.71□□□□□ -0.37
HLA-B-253ENST00000481849 NBPF14Q5TI25 921 aa12.71□□□□□ -0.37
HLA-B-253ENST00000481849 PTF1AQ7RTS3 328 aa12.71□□□□□ -0.37
HLA-B-253ENST00000481849 HDGFL2Q7Z4V5 671 aaPredicted RBP12.71□□□□□ -0.37
HLA-B-253ENST00000481849 MARCH10Q8NA82 808 aaPredicted RBP12.71□□□□□ -0.37
HLA-B-253ENST00000481849 SBNO2Q9Y2G9 1366 aa12.7□□□□□ -0.38
HLA-B-253ENST00000481849 CARD10Q9BWT7 1032 aa12.7□□□□□ -0.38
HLA-B-253ENST00000481849 POTEEQ6S8J3 1075 aa12.69□□□□□ -0.38
HLA-B-253ENST00000481849 CD163L1Q9NR16 1453 aa12.69□□□□□ -0.38
HLA-B-253ENST00000481849 MYOM1P52179 1685 aa12.69□□□□□ -0.38
HLA-B-253ENST00000481849 NFAT5O94916 1531 aa12.68□□□□□ -0.38
HLA-B-253ENST00000481849 C11orf95C9JLR9 678 aaPredicted RBP12.68□□□□□ -0.38
HLA-B-253ENST00000481849 ARHGAP33O14559 1287 aa12.68□□□□□ -0.38
HLA-B-253ENST00000481849 CDCA7Q9BWT1 371 aaPredicted RBP12.68□□□□□ -0.38
HLA-B-253ENST00000481849 NLRP2Q9NX02 1062 aa12.68□□□□□ -0.38
HLA-B-253ENST00000481849 TERF2IPQ9NYB0 399 aa12.68□□□□□ -0.38
HLA-B-253ENST00000481849 PARP4Q9UKK3 1724 aaKnown RBP12.68□□□□□ -0.38
HLA-B-253ENST00000481849 LRRC37A3O60309 1634 aa12.67□□□□□ -0.38
HLA-B-253ENST00000481849 COL18A1P39060 1754 aa12.67□□□□□ -0.38
HLA-B-253ENST00000481849 ST20-MTHFSA0A0A6YYL1 179 aa12.67□□□□□ -0.38
HLA-B-253ENST00000481849 EXOC5O00471 708 aa12.67□□□□□ -0.38
HLA-B-253ENST00000481849 PDE4AP27815 886 aa12.67□□□□□ -0.38
HLA-B-253ENST00000481849 APLP1P51693 650 aa12.67□□□□□ -0.38
HLA-B-253ENST00000481849 A0A1W2PP64 1363 aa12.67□□□□□ -0.38
HLA-B-253ENST00000481849 USP31Q70CQ4 1352 aa12.67□□□□□ -0.38
HLA-B-253ENST00000481849 AKAP12Q02952 1782 aa12.66□□□□□ -0.38
HLA-B-253ENST00000481849 PPP4R3BQ5MIZ7 849 aa12.66□□□□□ -0.38
HLA-B-253ENST00000481849 ANKRD24Q8TF21 1146 aa12.66□□□□□ -0.38
HLA-B-253ENST00000481849 NUP188Q5SRE5 1749 aa12.65□□□□□ -0.38
HLA-B-253ENST00000481849 RREB1Q92766 1687 aa12.65□□□□□ -0.38
HLA-B-253ENST00000481849 GTPBP6O43824 516 aaPredicted RBP12.65□□□□□ -0.38
HLA-B-253ENST00000481849 LTV1Q96GA3 475 aaPredicted RBP12.65□□□□□ -0.38
HLA-B-253ENST00000481849 ACSBG1Q96GR2 724 aa12.65□□□□□ -0.38
HLA-B-253ENST00000481849 CRISPLD2Q9H0B8 497 aa12.65□□□□□ -0.38
HLA-B-253ENST00000481849 CCDC7Q96M83 1385 aa12.65□□□□□ -0.38
HLA-B-253ENST00000481849 EDC4Q6P2E9 1401 aaKnown RBP12.64□□□□□ -0.39
HLA-B-253ENST00000481849 PLSCR1O15162 318 aa12.64□□□□□ -0.39
HLA-B-253ENST00000481849 TRIM26Q12899 539 aaPredicted RBP12.64□□□□□ -0.39
HLA-B-253ENST00000481849 PPP1R15BQ5SWA1 713 aa12.64□□□□□ -0.39
HLA-B-253ENST00000481849 JMYQ8N9B5 988 aa12.64□□□□□ -0.39
HLA-B-253ENST00000481849 TESK2Q96S53 571 aa12.64□□□□□ -0.39
HLA-B-253ENST00000481849 ANO8Q9HCE9 1232 aaPredicted RBP12.64□□□□□ -0.39
HLA-B-253ENST00000481849 PEAK1Q9H792 1746 aa12.64□□□□□ -0.39
HLA-B-253ENST00000481849 MON2Q7Z3U7 1717 aa12.63□□□□□ -0.39
HLA-B-253ENST00000481849 IL2RBP14784 551 aa12.62□□□□□ -0.39
HLA-B-253ENST00000481849 FBLN1P23142 703 aa12.62□□□□□ -0.39
HLA-B-253ENST00000481849 SYT17Q9BSW7 474 aa12.62□□□□□ -0.39
HLA-B-253ENST00000481849 TXNRD1Q16881 649 aa12.61□□□□□ -0.39
HLA-B-253ENST00000481849 OXER1Q8TDS5 423 aa12.61□□□□□ -0.39
HLA-B-253ENST00000481849 COG3Q96JB2 828 aa12.61□□□□□ -0.39
HLA-B-253ENST00000481849 PUS7Q96PZ0 661 aaKnown RBP12.61□□□□□ -0.39
HLA-B-253ENST00000481849 PDGFDQ9GZP0 370 aaPredicted RBP12.61□□□□□ -0.39
HLA-B-253ENST00000481849 ADGRD1Q6QNK2 874 aa12.6□□□□□ -0.39
HLA-B-253ENST00000481849 RGPD5Q99666 1765 aa12.6□□□□□ -0.39
HLA-B-253ENST00000481849 BCL9O00512 1426 aa12.6□□□□□ -0.39
HLA-B-253ENST00000481849 ABCC6O95255 1503 aa12.59□□□□□ -0.39
HLA-B-253ENST00000481849 ZBTB7AO95365 584 aa12.59□□□□□ -0.39
HLA-B-253ENST00000481849 AMPHP49418 695 aa12.59□□□□□ -0.39
HLA-B-253ENST00000481849 PSEN2P49810 448 aa12.59□□□□□ -0.39
HLA-B-253ENST00000481849 DDX54Q8TDD1 881 aaKnown RBP12.59□□□□□ -0.39
HLA-B-253ENST00000481849 IP6K1Q92551 441 aa12.59□□□□□ -0.39
HLA-B-253ENST00000481849 LARP6Q9BRS8 491 aaKnown RBP12.59□□□□□ -0.39
HLA-B-253ENST00000481849 FHDC1Q9C0D6 1143 aaPredicted RBP12.59□□□□□ -0.39
HLA-B-253ENST00000481849 STK32BQ9NY57 414 aa12.59□□□□□ -0.39
HLA-B-253ENST00000481849 USP47Q96K76 1375 aa12.58□□□□□ -0.4
HLA-B-253ENST00000481849 WNK3Q9BYP7 1800 aa12.58□□□□□ -0.4
HLA-B-253ENST00000481849 TMF1P82094 1093 aa12.58□□□□□ -0.4
HLA-B-253ENST00000481849 PDE4DIPQ5VU43 2346 aa12.58□□□□□ -0.4
HLA-B-253ENST00000481849 ATP10DQ9P241 1426 aa12.58□□□□□ -0.4
HLA-B-253ENST00000481849 MAP3K19Q56UN5 1328 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 84.7 ms