RNA–Protein interactions for RNA: ENST00000480562.3

ABCF3-214, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 1 (best)

Gene ABCF3, Length 1,182 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-214ENST00000480562 YBX3P16989 372 aaKnown RBP eCLIP25.75■■□□□ 1.71
ABCF3-214ENST00000480562 ZNF530Q6P9A1 599 aaPredicted RBP25.75■■□□□ 1.71
ABCF3-214ENST00000480562 GNPATO15228 680 aa25.74■■□□□ 1.71
ABCF3-214ENST00000480562 SSFA2P28290 1259 aa25.74■■□□□ 1.71
ABCF3-214ENST00000480562 ERVV-2B6SEH9 535 aa25.73■■□□□ 1.71
ABCF3-214ENST00000480562 DCAF5Q96JK2 942 aa25.73■■□□□ 1.71
ABCF3-214ENST00000480562 CD2APQ9Y5K6 639 aa25.73■■□□□ 1.71
ABCF3-214ENST00000480562 KIF7Q2M1P5 1343 aa25.72■■□□□ 1.71
ABCF3-214ENST00000480562 HSP90AB1P08238 724 aaKnown RBP25.72■■□□□ 1.71
ABCF3-214ENST00000480562 KDM6AO15550 1401 aaPredicted RBP25.71■■□□□ 1.71
ABCF3-214ENST00000480562 AMOTQ4VCS5 1084 aa25.71■■□□□ 1.71
ABCF3-214ENST00000480562 AMER1Q5JTC6 1135 aaPredicted RBP25.71■■□□□ 1.71
ABCF3-214ENST00000480562 SLC4A9Q96Q91 983 aa25.71■■□□□ 1.71
ABCF3-214ENST00000480562 SULT6B1Q6IMI4 303 aa25.7■■□□□ 1.7
ABCF3-214ENST00000480562 RBM42Q9BTD8 480 aaKnown RBP25.7■■□□□ 1.7
ABCF3-214ENST00000480562 KDRP35968 1356 aa25.69■■□□□ 1.7
ABCF3-214ENST00000480562 IL13P35225 146 aa25.69■■□□□ 1.7
ABCF3-214ENST00000480562 CABP4P57796 275 aa25.69■■□□□ 1.7
ABCF3-214ENST00000480562 GRIN3BO60391 1043 aa25.68■■□□□ 1.7
ABCF3-214ENST00000480562 MTHFSP49914 203 aa25.68■■□□□ 1.7
ABCF3-214ENST00000480562 C1orf141Q5JVX7 400 aa25.66■■□□□ 1.7
ABCF3-214ENST00000480562 RTCBQ9Y3I0 505 aaKnown RBP25.64■■□□□ 1.7
ABCF3-214ENST00000480562 WWC3Q9ULE0 1092 aa25.63■■□□□ 1.69
ABCF3-214ENST00000480562 TRAPPC3LQ5T215 181 aa25.62■■□□□ 1.69
ABCF3-214ENST00000480562 NFATC2IPQ8NCF5 419 aa25.62■■□□□ 1.69
ABCF3-214ENST00000480562 PTCD1O75127 700 aaKnown RBP25.61■■□□□ 1.69
ABCF3-214ENST00000480562 CC2D1BQ5T0F9 858 aaKnown RBP25.61■■□□□ 1.69
ABCF3-214ENST00000480562 PER1O15534 1290 aaPredicted RBP25.6■■□□□ 1.69
ABCF3-214ENST00000480562 MMP10P09238 476 aa25.6■■□□□ 1.69
ABCF3-214ENST00000480562 RC3H1Q5TC82 1133 aaKnown RBP25.6■■□□□ 1.69
ABCF3-214ENST00000480562 ZNF831Q5JPB2 1677 aa25.6■■□□□ 1.69
ABCF3-214ENST00000480562 ARHGEF1Q92888 912 aaKnown RBP25.59■■□□□ 1.69
ABCF3-214ENST00000480562 COL5A3P25940 1745 aaPredicted RBP25.59■■□□□ 1.69
ABCF3-214ENST00000480562 CNTNAP4Q9C0A0 1308 aa25.59■■□□□ 1.69
ABCF3-214ENST00000480562 HMOX1P09601 288 aa25.58■■□□□ 1.69
ABCF3-214ENST00000480562 RPS6KA4O75676 772 aa25.57■■□□□ 1.68
ABCF3-214ENST00000480562 C1QTNF8P60827 252 aa25.57■■□□□ 1.68
ABCF3-214ENST00000480562 ADRA2BP18089 450 aa25.55■■□□□ 1.68
ABCF3-214ENST00000480562 RFC4P35249 363 aa25.55■■□□□ 1.68
ABCF3-214ENST00000480562 CNGB1Q14028 1251 aaPredicted RBP25.55■■□□□ 1.68
ABCF3-214ENST00000480562 AKAP4Q5JQC9 854 aa25.55■■□□□ 1.68
ABCF3-214ENST00000480562 NLGN1Q8N2Q7 840 aa25.55■■□□□ 1.68
ABCF3-214ENST00000480562 MYH14Q7Z406 1995 aaKnown RBP25.55■■□□□ 1.68
ABCF3-214ENST00000480562 GIGYF1O75420 1035 aaPredicted RBP25.54■■□□□ 1.68
ABCF3-214ENST00000480562 LGR6Q9HBX8 967 aa25.54■■□□□ 1.68
ABCF3-214ENST00000480562 SCN11AQ9UI33 1791 aa25.54■■□□□ 1.68
ABCF3-214ENST00000480562 GYS1P13807 737 aa25.53■■□□□ 1.68
ABCF3-214ENST00000480562 CRKLP46109 303 aaKnown RBP25.53■■□□□ 1.68
ABCF3-214ENST00000480562 CICQ96RK0 1608 aaPredicted RBP25.52■■□□□ 1.68
ABCF3-214ENST00000480562 DIAPH1O60610 1272 aaKnown RBP25.52■■□□□ 1.68
ABCF3-214ENST00000480562 SLC52A2Q9HAB3 445 aa25.51■■□□□ 1.67
ABCF3-214ENST00000480562 ATP10DQ9P241 1426 aa25.51■■□□□ 1.67
ABCF3-214ENST00000480562 SENP3-EIF4A1A0A087X0R7 540 aa25.5■■□□□ 1.67
ABCF3-214ENST00000480562 TJP1Q07157 1748 aa25.49■■□□□ 1.67
ABCF3-214ENST00000480562 RNMTO43148 476 aaKnown RBP25.49■■□□□ 1.67
ABCF3-214ENST00000480562 MTHFSDQ2M296 383 aaKnown RBP25.49■■□□□ 1.67
ABCF3-214ENST00000480562 C4AP0C0L4 1744 aa25.49■■□□□ 1.67
ABCF3-214ENST00000480562 PXDNLA1KZ92 1463 aa25.48■■□□□ 1.67
ABCF3-214ENST00000480562 SRP68Q9UHB9 627 aaKnown RBP25.48■■□□□ 1.67
ABCF3-214ENST00000480562 A0A0G2JLW4 131 aa25.47■■□□□ 1.67
ABCF3-214ENST00000480562 SLC39A6Q13433 755 aa25.47■■□□□ 1.67
ABCF3-214ENST00000480562 INTS5Q6P9B9 1019 aaKnown RBP25.47■■□□□ 1.67
ABCF3-214ENST00000480562 DNAJC10Q8IXB1 793 aa25.47■■□□□ 1.67
ABCF3-214ENST00000480562 PARP3Q9Y6F1 533 aa25.47■■□□□ 1.67
ABCF3-214ENST00000480562 C10orf71Q711Q0 1435 aa25.46■■□□□ 1.67
ABCF3-214ENST00000480562 CCDC87Q9NVE4 849 aa25.46■■□□□ 1.67
ABCF3-214ENST00000480562 KIF13BQ9NQT8 1826 aa25.46■■□□□ 1.67
ABCF3-214ENST00000480562 TGFB2P61812 414 aa25.45■■□□□ 1.66
ABCF3-214ENST00000480562 KIAA1551Q9HCM1 1747 aa25.45■■□□□ 1.66
ABCF3-214ENST00000480562 NPC1L1Q9UHC9 1359 aa25.44■■□□□ 1.66
ABCF3-214ENST00000480562 N4BP2Q86UW6 1770 aaPredicted RBP25.44■■□□□ 1.66
ABCF3-214ENST00000480562 FKBP8Q14318 412 aa25.44■■□□□ 1.66
ABCF3-214ENST00000480562 ZNF526Q8TF50 670 aaPredicted RBP25.44■■□□□ 1.66
ABCF3-214ENST00000480562 COL3A1P02461 1466 aaPredicted RBP25.44■■□□□ 1.66
ABCF3-214ENST00000480562 MRC1P22897 1456 aa25.44■■□□□ 1.66
ABCF3-214ENST00000480562 ADCY9O60503 1353 aa25.44■■□□□ 1.66
ABCF3-214ENST00000480562 USP42Q9H9J4 1324 aaKnown RBP25.43■■□□□ 1.66
ABCF3-214ENST00000480562 U2SURPO15042 1029 aaKnown RBP25.43■■□□□ 1.66
ABCF3-214ENST00000480562 DPEP1P16444 411 aa25.43■■□□□ 1.66
ABCF3-214ENST00000480562 VIRMAQ69YN4 1812 aaKnown RBP25.42■■□□□ 1.66
ABCF3-214ENST00000480562 GPBP1L1Q9HC44 474 aaPredicted RBP25.42■■□□□ 1.66
ABCF3-214ENST00000480562 BCS1LQ9Y276 419 aa25.42■■□□□ 1.66
ABCF3-214ENST00000480562 CYP19A1P11511 503 aaPredicted RBP25.4■■□□□ 1.66
ABCF3-214ENST00000480562 DDR1Q08345 913 aa25.4■■□□□ 1.66
ABCF3-214ENST00000480562 KCPQ6ZWJ8 1503 aa25.39■■□□□ 1.66
ABCF3-214ENST00000480562 ADAMTS7Q9UKP4 1686 aa25.39■■□□□ 1.65
ABCF3-214ENST00000480562 SOS1Q07889 1333 aaPredicted RBP25.38■■□□□ 1.65
ABCF3-214ENST00000480562 ZPR1O75312 459 aa25.36■■□□□ 1.65
ABCF3-214ENST00000480562 FCHSD2O94868 740 aa25.36■■□□□ 1.65
ABCF3-214ENST00000480562 USPL1Q5W0Q7 1092 aa25.36■■□□□ 1.65
ABCF3-214ENST00000480562 ZBTB1Q9Y2K1 713 aa25.36■■□□□ 1.65
ABCF3-214ENST00000480562 KCNA3P22001 575 aa25.35■■□□□ 1.65
ABCF3-214ENST00000480562 ARHGAP27Q6ZUM4 889 aa25.35■■□□□ 1.65
ABCF3-214ENST00000480562 TM4SF1P30408 202 aa25.34■■□□□ 1.65
ABCF3-214ENST00000480562 IL17REQ8NFR9 667 aa25.34■■□□□ 1.65
ABCF3-214ENST00000480562 POLRMTO00411 1230 aaKnown RBP25.33■■□□□ 1.65
ABCF3-214ENST00000480562 VSIG10Q8N0Z9 540 aa25.33■■□□□ 1.65
ABCF3-214ENST00000480562 GAS2L2Q8NHY3 880 aa25.33■■□□□ 1.65
ABCF3-214ENST00000480562 COL15A1P39059 1388 aa25.32■■□□□ 1.64
ABCF3-214ENST00000480562 GNAT3A8MTJ3 354 aa25.32■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms