RNA–Protein interactions for RNA: ENST00000479555.1

CMSS1-204, Transcript of cms1 ribosomal small subunit homolog (yeast), humanhuman

TSL 4

Gene CMSS1, Length 654 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1-204ENST00000479555 PLA2G4EQ3MJ16 856 aa8.44□□□□□ -1.06
CMSS1-204ENST00000479555 C4orf17Q53FE4 359 aa8.44□□□□□ -1.06
CMSS1-204ENST00000479555 C1orf229Q6ZS94 237 aaPredicted RBP8.44□□□□□ -1.06
CMSS1-204ENST00000479555 SHISA8B8ZZ34 492 aa8.43□□□□□ -1.06
CMSS1-204ENST00000479555 MYCP01106 439 aaPredicted RBP8.43□□□□□ -1.06
CMSS1-204ENST00000479555 IRF5Q13568 498 aa8.43□□□□□ -1.06
CMSS1-204ENST00000479555 UBAP2LQ14157 1087 aaKnown RBP8.43□□□□□ -1.06
CMSS1-204ENST00000479555 WDR44Q5JSH3 913 aa8.43□□□□□ -1.06
CMSS1-204ENST00000479555 XAGE2Q96GT9 111 aa8.43□□□□□ -1.06
CMSS1-204ENST00000479555 ETNK1Q9HBU6 452 aa8.43□□□□□ -1.06
CMSS1-204ENST00000479555 OIP5O43482 229 aa8.42□□□□□ -1.06
CMSS1-204ENST00000479555 OXLD1Q5BKU9 147 aa8.42□□□□□ -1.06
CMSS1-204ENST00000479555 TMEM214Q6NUQ4 689 aaKnown RBP8.42□□□□□ -1.06
CMSS1-204ENST00000479555 OXCT2Q9BYC2 517 aaPredicted RBP8.42□□□□□ -1.06
CMSS1-204ENST00000479555 SOCS7O14512 581 aa8.41□□□□□ -1.06
CMSS1-204ENST00000479555 MSX1P28360 303 aa8.41□□□□□ -1.06
CMSS1-204ENST00000479555 PODNQ7Z5L7 613 aa8.41□□□□□ -1.06
CMSS1-204ENST00000479555 DOLKQ9UPQ8 538 aa8.41□□□□□ -1.06
CMSS1-204ENST00000479555 A0A1B0GTH6 734 aa8.4□□□□□ -1.06
CMSS1-204ENST00000479555 PHF20L1A8MW92 1017 aa8.4□□□□□ -1.06
CMSS1-204ENST00000479555 IGHA1P01876 353 aa8.4□□□□□ -1.06
CMSS1-204ENST00000479555 VAC14Q08AM6 782 aa8.4□□□□□ -1.06
CMSS1-204ENST00000479555 GNASQ5JWF2 1037 aa8.4□□□□□ -1.06
CMSS1-204ENST00000479555 PHTF2Q8N3S3 785 aa8.4□□□□□ -1.06
CMSS1-204ENST00000479555 BEND7Q8N7W2 519 aaPredicted RBP8.4□□□□□ -1.06
CMSS1-204ENST00000479555 ZNF592Q92610 1267 aa8.4□□□□□ -1.06
CMSS1-204ENST00000479555 KLRG1Q96E93 195 aa8.4□□□□□ -1.06
CMSS1-204ENST00000479555 ABHD17AQ96GS6 310 aa8.4□□□□□ -1.06
CMSS1-204ENST00000479555 SPOCK3Q9BQ16 436 aa8.4□□□□□ -1.06
CMSS1-204ENST00000479555 C2CD2LO14523 706 aa8.39□□□□□ -1.07
CMSS1-204ENST00000479555 RNF135Q8IUD6 432 aa8.39□□□□□ -1.07
CMSS1-204ENST00000479555 NSFL1CQ9UNZ2 370 aaKnown RBP8.39□□□□□ -1.07
CMSS1-204ENST00000479555 FOXK2Q01167 660 aa8.38□□□□□ -1.07
CMSS1-204ENST00000479555 TLR1Q15399 786 aa8.38□□□□□ -1.07
CMSS1-204ENST00000479555 GALNT6Q8NCL4 622 aa8.38□□□□□ -1.07
CMSS1-204ENST00000479555 CFHR5Q9BXR6 569 aa8.38□□□□□ -1.07
CMSS1-204ENST00000479555 APBB1O00213 710 aa8.37□□□□□ -1.07
CMSS1-204ENST00000479555 MSTNO14793 375 aa8.37□□□□□ -1.07
CMSS1-204ENST00000479555 PROCP04070 461 aa8.37□□□□□ -1.07
CMSS1-204ENST00000479555 MAP2K3P46734 347 aa8.37□□□□□ -1.07
CMSS1-204ENST00000479555 PLA2G4AP47712 749 aa8.37□□□□□ -1.07
CMSS1-204ENST00000479555 CTBSQ01459 385 aa8.37□□□□□ -1.07
CMSS1-204ENST00000479555 SLFNL1Q499Z3 407 aa8.37□□□□□ -1.07
CMSS1-204ENST00000479555 CSB-PGBD3P0DP91 1061 aa8.36□□□□□ -1.07
CMSS1-204ENST00000479555 GTF2E1P29083 439 aaPredicted RBP8.36□□□□□ -1.07
CMSS1-204ENST00000479555 PGBD3Q8N328 593 aa8.36□□□□□ -1.07
CMSS1-204ENST00000479555 RRAGCQ9HB90 399 aa8.36□□□□□ -1.07
CMSS1-204ENST00000479555 GDPD2Q9HCC8 539 aa8.36□□□□□ -1.07
CMSS1-204ENST00000479555 BNIP3LO60238 219 aa8.35□□□□□ -1.07
CMSS1-204ENST00000479555 BMP4P12644 408 aa8.35□□□□□ -1.07
CMSS1-204ENST00000479555 SCNN1DP51172 638 aa8.35□□□□□ -1.07
CMSS1-204ENST00000479555 EIF4G2P78344 907 aaKnown RBP eCLIP8.35□□□□□ -1.07
CMSS1-204ENST00000479555 TPRNQ4KMQ1 711 aa8.35□□□□□ -1.07
CMSS1-204ENST00000479555 ESCO1Q5FWF5 840 aa8.35□□□□□ -1.07
CMSS1-204ENST00000479555 RHBDD1Q8TEB9 315 aa8.35□□□□□ -1.07
CMSS1-204ENST00000479555 KRBA1A5PL33 1030 aa8.34□□□□□ -1.07
CMSS1-204ENST00000479555 COL8A1P27658 744 aa8.34□□□□□ -1.07
CMSS1-204ENST00000479555 ABL2P42684 1182 aa8.34□□□□□ -1.07
CMSS1-204ENST00000479555 GDF10P55107 478 aa8.34□□□□□ -1.07
CMSS1-204ENST00000479555 USP4Q13107 963 aa8.34□□□□□ -1.07
CMSS1-204ENST00000479555 PPARGC1BQ86YN6 1023 aaKnown RBP8.34□□□□□ -1.07
CMSS1-204ENST00000479555 EDARADDQ8WWZ3 215 aa8.34□□□□□ -1.07
CMSS1-204ENST00000479555 NDFIP2Q9NV92 336 aa8.34□□□□□ -1.07
CMSS1-204ENST00000479555 HCN2Q9UL51 889 aa8.34□□□□□ -1.07
CMSS1-204ENST00000479555 PHF24Q9UPV7 400 aa8.34□□□□□ -1.07
CMSS1-204ENST00000479555 ATP4AP20648 1035 aa8.33□□□□□ -1.08
CMSS1-204ENST00000479555 FGFR3P22607 806 aa8.33□□□□□ -1.08
CMSS1-204ENST00000479555 EFHC2Q5JST6 749 aa8.33□□□□□ -1.08
CMSS1-204ENST00000479555 SUV39H2Q9H5I1 410 aa8.33□□□□□ -1.08
CMSS1-204ENST00000479555 DNAAF2Q9NVR5 837 aaKnown RBP8.33□□□□□ -1.08
CMSS1-204ENST00000479555 SERTAD1Q9UHV2 236 aa8.33□□□□□ -1.08
CMSS1-204ENST00000479555 GGA1Q9UJY5 639 aa8.33□□□□□ -1.08
CMSS1-204ENST00000479555 USP3Q9Y6I4 520 aa8.33□□□□□ -1.08
CMSS1-204ENST00000479555 HOXB4P17483 251 aaPredicted RBP8.32□□□□□ -1.08
CMSS1-204ENST00000479555 LRRC4BQ9NT99 713 aa8.32□□□□□ -1.08
CMSS1-204ENST00000479555 ATXN7L1Q9ULK2 861 aaPredicted RBP8.32□□□□□ -1.08
CMSS1-204ENST00000479555 ADAM23O75077 832 aa8.31□□□□□ -1.08
CMSS1-204ENST00000479555 INHAP05111 366 aa8.31□□□□□ -1.08
CMSS1-204ENST00000479555 TBC1D9Q6ZT07 1266 aa8.31□□□□□ -1.08
CMSS1-204ENST00000479555 AIDAQ96BJ3 306 aa8.31□□□□□ -1.08
CMSS1-204ENST00000479555 CHIC2Q9UKJ5 165 aa8.31□□□□□ -1.08
CMSS1-204ENST00000479555 DCDC2BA2VCK2 349 aa8.3□□□□□ -1.08
CMSS1-204ENST00000479555 PIK3CDO00329 1044 aa8.3□□□□□ -1.08
CMSS1-204ENST00000479555 AMPD1P23109 780 aa8.3□□□□□ -1.08
CMSS1-204ENST00000479555 GRIN2CQ14957 1233 aa8.3□□□□□ -1.08
CMSS1-204ENST00000479555 GOLGA6L1Q8N7Z2 621 aa8.3□□□□□ -1.08
CMSS1-204ENST00000479555 PLPP7Q8NBV4 271 aa8.3□□□□□ -1.08
CMSS1-204ENST00000479555 ZCCHC2Q9C0B9 1178 aaKnown RBP8.3□□□□□ -1.08
CMSS1-204ENST00000479555 CRISPLD1Q9H336 500 aa8.3□□□□□ -1.08
CMSS1-204ENST00000479555 GDF2Q9UK05 429 aaPredicted RBP8.3□□□□□ -1.08
CMSS1-204ENST00000479555 MKL2Q9ULH7 1088 aa8.3□□□□□ -1.08
CMSS1-204ENST00000479555 NEURL1BA8MQ27 555 aa8.29□□□□□ -1.08
CMSS1-204ENST00000479555 LBRQ14739 615 aaKnown RBP8.29□□□□□ -1.08
CMSS1-204ENST00000479555 XP32Q5T750 250 aa8.29□□□□□ -1.08
CMSS1-204ENST00000479555 TMEM229AB2RXF0 380 aa8.28□□□□□ -1.08
CMSS1-204ENST00000479555 CD33P20138 364 aa8.28□□□□□ -1.08
CMSS1-204ENST00000479555 LINC00114Q6XXX2 140 aa8.28□□□□□ -1.08
CMSS1-204ENST00000479555 SLCO4C1Q6ZQN7 724 aa8.28□□□□□ -1.08
CMSS1-204ENST00000479555 SMTNP53814 917 aa8.27□□□□□ -1.09
CMSS1-204ENST00000479555 ZNF295-AS1Q8N0V1 137 aa8.27□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms