RNA–Protein interactions for RNA: ENST00000479199.1

GCA-208, Transcript of grancalcin, humanhuman

TSL 2

Gene GCA, Length 597 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCA-208ENST00000479199 PHKG2P15735 406 aa16.61■□□□□ 0.25
GCA-208ENST00000479199 TNNT2P45379 298 aaPredicted RBP16.61■□□□□ 0.25
GCA-208ENST00000479199 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.61■□□□□ 0.25
GCA-208ENST00000479199 KDRP35968 1356 aa16.61■□□□□ 0.25
GCA-208ENST00000479199 GNPATO15228 680 aa16.6■□□□□ 0.25
GCA-208ENST00000479199 SSFA2P28290 1259 aa16.6■□□□□ 0.25
GCA-208ENST00000479199 EIF4A2Q14240 407 aaKnown RBP16.6■□□□□ 0.25
GCA-208ENST00000479199 IFNL2Q8IZJ0 200 aa16.59■□□□□ 0.25
GCA-208ENST00000479199 ATP6V1AP38606 617 aa16.58■□□□□ 0.24
GCA-208ENST00000479199 ATG3Q9NT62 314 aa16.58■□□□□ 0.24
GCA-208ENST00000479199 TJP1Q07157 1748 aa16.58■□□□□ 0.24
GCA-208ENST00000479199 SCN11AQ9UI33 1791 aa16.58■□□□□ 0.24
GCA-208ENST00000479199 KDM6AO15550 1401 aaPredicted RBP16.57■□□□□ 0.24
GCA-208ENST00000479199 PXDNLA1KZ92 1463 aa16.56■□□□□ 0.24
GCA-208ENST00000479199 PLEKHG2Q9H7P9 1386 aa16.56■□□□□ 0.24
GCA-208ENST00000479199 ZNF526Q8TF50 670 aaPredicted RBP16.56■□□□□ 0.24
GCA-208ENST00000479199 CEP350Q5VT06 3117 aa16.56■□□□□ 0.24
GCA-208ENST00000479199 GPBP1L1Q9HC44 474 aaPredicted RBP16.55■□□□□ 0.24
GCA-208ENST00000479199 TIMELESSQ9UNS1 1208 aa16.55■□□□□ 0.24
GCA-208ENST00000479199 ARFGEF1Q9Y6D6 1849 aa16.54■□□□□ 0.24
GCA-208ENST00000479199 MMP10P09238 476 aa16.54■□□□□ 0.24
GCA-208ENST00000479199 SLC4A9Q96Q91 983 aa16.54■□□□□ 0.24
GCA-208ENST00000479199 C10orf71Q711Q0 1435 aa16.53■□□□□ 0.24
GCA-208ENST00000479199 RBM42Q9BTD8 480 aaKnown RBP16.52■□□□□ 0.24
GCA-208ENST00000479199 ADAMTS7Q9UKP4 1686 aa16.51■□□□□ 0.23
GCA-208ENST00000479199 HSPA5P11021 654 aaKnown RBP16.51■□□□□ 0.23
GCA-208ENST00000479199 ZNF530Q6P9A1 599 aaPredicted RBP16.51■□□□□ 0.23
GCA-208ENST00000479199 AEBP1Q8IUX7 1158 aa16.51■□□□□ 0.23
GCA-208ENST00000479199 PCGF6Q9BYE7 350 aa16.51■□□□□ 0.23
GCA-208ENST00000479199 PANK3Q9H999 370 aa16.51■□□□□ 0.23
GCA-208ENST00000479199 CNTNAP4Q9C0A0 1308 aa16.5■□□□□ 0.23
GCA-208ENST00000479199 CLSPNQ9HAW4 1339 aa16.5■□□□□ 0.23
GCA-208ENST00000479199 ERVV-2B6SEH9 535 aa16.5■□□□□ 0.23
GCA-208ENST00000479199 DCAF5Q96JK2 942 aa16.5■□□□□ 0.23
GCA-208ENST00000479199 RTCBQ9Y3I0 505 aaKnown RBP16.5■□□□□ 0.23
GCA-208ENST00000479199 HSP90AB1P08238 724 aaKnown RBP16.49■□□□□ 0.23
GCA-208ENST00000479199 PLEKHO1Q53GL0 409 aaPredicted RBP16.49■□□□□ 0.23
GCA-208ENST00000479199 EIF4G2P78344 907 aaKnown RBP eCLIP16.48■□□□□ 0.23
GCA-208ENST00000479199 TRAPPC3LQ5T215 181 aa16.48■□□□□ 0.23
GCA-208ENST00000479199 CABP4P57796 275 aa16.47■□□□□ 0.23
GCA-208ENST00000479199 ARHGEF1Q92888 912 aaKnown RBP16.47■□□□□ 0.23
GCA-208ENST00000479199 AFDNP55196 1824 aaKnown RBP16.47■□□□□ 0.23
GCA-208ENST00000479199 A0A0G2JLW4 131 aa16.46■□□□□ 0.23
GCA-208ENST00000479199 GYS1P13807 737 aa16.46■□□□□ 0.23
GCA-208ENST00000479199 ADRA2BP18089 450 aa16.46■□□□□ 0.23
GCA-208ENST00000479199 RC3H1Q5TC82 1133 aaKnown RBP16.46■□□□□ 0.23
GCA-208ENST00000479199 SBF1O95248 1867 aa16.46■□□□□ 0.22
GCA-208ENST00000479199 RPS6KA4O75676 772 aa16.45■□□□□ 0.22
GCA-208ENST00000479199 HSPA6P17066 643 aa16.45■□□□□ 0.22
GCA-208ENST00000479199 AMOTQ4VCS5 1084 aa16.45■□□□□ 0.22
GCA-208ENST00000479199 C1orf141Q5JVX7 400 aa16.45■□□□□ 0.22
GCA-208ENST00000479199 MORC1Q86VD1 984 aa16.45■□□□□ 0.22
GCA-208ENST00000479199 NLGN1Q8N2Q7 840 aa16.45■□□□□ 0.22
GCA-208ENST00000479199 BCS1LQ9Y276 419 aa16.45■□□□□ 0.22
GCA-208ENST00000479199 MRC1P22897 1456 aa16.44■□□□□ 0.22
GCA-208ENST00000479199 KIF3CO14782 793 aa16.44■□□□□ 0.22
GCA-208ENST00000479199 PTCD1O75127 700 aaKnown RBP16.44■□□□□ 0.22
GCA-208ENST00000479199 DPEP1P16444 411 aa16.44■□□□□ 0.22
GCA-208ENST00000479199 RFC4P35249 363 aa16.44■□□□□ 0.22
GCA-208ENST00000479199 MTHFSP49914 203 aa16.44■□□□□ 0.22
GCA-208ENST00000479199 SULT6B1Q6IMI4 303 aa16.44■□□□□ 0.22
GCA-208ENST00000479199 CCDC87Q9NVE4 849 aa16.44■□□□□ 0.22
GCA-208ENST00000479199 UBR2Q8IWV8 1755 aa16.43■□□□□ 0.22
GCA-208ENST00000479199 DLEC1Q9Y238 1755 aa16.43■□□□□ 0.22
GCA-208ENST00000479199 CRKLP46109 303 aaKnown RBP16.43■□□□□ 0.22
GCA-208ENST00000479199 TGFB2P61812 414 aa16.43■□□□□ 0.22
GCA-208ENST00000479199 SRP68Q9UHB9 627 aaKnown RBP16.43■□□□□ 0.22
GCA-208ENST00000479199 NFATC2IPQ8NCF5 419 aa16.42■□□□□ 0.22
GCA-208ENST00000479199 PARP3Q9Y6F1 533 aa16.42■□□□□ 0.22
GCA-208ENST00000479199 IL13P35225 146 aa16.41■□□□□ 0.22
GCA-208ENST00000479199 USP42Q9H9J4 1324 aaKnown RBP16.41■□□□□ 0.22
GCA-208ENST00000479199 KCPQ6ZWJ8 1503 aa16.4■□□□□ 0.22
GCA-208ENST00000479199 CCDC88AQ3V6T2 1871 aa16.4■□□□□ 0.22
GCA-208ENST00000479199 WDR90Q96KV7 1748 aa16.4■□□□□ 0.22
GCA-208ENST00000479199 NRXN2Q9P2S2 1712 aa16.4■□□□□ 0.22
GCA-208ENST00000479199 FCHSD2O94868 740 aa16.4■□□□□ 0.22
GCA-208ENST00000479199 DDR1Q08345 913 aa16.4■□□□□ 0.22
GCA-208ENST00000479199 ARHGAP27Q6ZUM4 889 aa16.4■□□□□ 0.22
GCA-208ENST00000479199 FKBP8Q14318 412 aa16.39■□□□□ 0.21
GCA-208ENST00000479199 TNRC6CQ9HCJ0 1690 aaKnown RBP16.39■□□□□ 0.21
GCA-208ENST00000479199 KCNA3P22001 575 aa16.38■□□□□ 0.21
GCA-208ENST00000479199 KNSTRNQ9Y448 316 aa16.38■□□□□ 0.21
GCA-208ENST00000479199 SIPA1L3O60292 1781 aaPredicted RBP16.37■□□□□ 0.21
GCA-208ENST00000479199 AMER1Q5JTC6 1135 aaPredicted RBP16.37■□□□□ 0.21
GCA-208ENST00000479199 INTS5Q6P9B9 1019 aaKnown RBP16.37■□□□□ 0.21
GCA-208ENST00000479199 DNAJC10Q8IXB1 793 aa16.37■□□□□ 0.21
GCA-208ENST00000479199 NMRK2Q9NPI5 230 aa16.37■□□□□ 0.21
GCA-208ENST00000479199 TIAM2Q8IVF5 1701 aa16.36■□□□□ 0.21
GCA-208ENST00000479199 AKAP4Q5JQC9 854 aa16.36■□□□□ 0.21
GCA-208ENST00000479199 IFFO2Q5TF58 517 aa16.36■□□□□ 0.21
GCA-208ENST00000479199 SCN7AQ01118 1682 aa16.36■□□□□ 0.21
GCA-208ENST00000479199 HMOX1P09601 288 aa16.35■□□□□ 0.21
GCA-208ENST00000479199 CHRNA5P30532 468 aa16.35■□□□□ 0.21
GCA-208ENST00000479199 SLC52A2Q9HAB3 445 aa16.35■□□□□ 0.21
GCA-208ENST00000479199 LGR6Q9HBX8 967 aa16.35■□□□□ 0.21
GCA-208ENST00000479199 SOS1Q07889 1333 aaPredicted RBP16.35■□□□□ 0.21
GCA-208ENST00000479199 ANKRD31Q8N7Z5 1873 aa16.35■□□□□ 0.21
GCA-208ENST00000479199 CACNA1SQ13698 1873 aa16.34■□□□□ 0.21
GCA-208ENST00000479199 POLRMTO00411 1230 aaKnown RBP16.34■□□□□ 0.21
GCA-208ENST00000479199 SLC39A6Q13433 755 aa16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms