RNA–Protein interactions for RNA: ENST00000479029.1

PHF1-207, Transcript of PHD finger protein 1, humanhuman

TSL 2

Gene PHF1, Length 933 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF1-207ENST00000479029 NLGN2Q8NFZ4 835 aa22.62■■□□□ 1.21
PHF1-207ENST00000479029 SSFA2P28290 1259 aa22.61■■□□□ 1.21
PHF1-207ENST00000479029 MTHFSP49914 203 aa22.61■■□□□ 1.21
PHF1-207ENST00000479029 CABP4P57796 275 aa22.61■■□□□ 1.21
PHF1-207ENST00000479029 ITPK1Q13572 414 aa22.61■■□□□ 1.21
PHF1-207ENST00000479029 AMIGO3Q86WK7 504 aa22.61■■□□□ 1.21
PHF1-207ENST00000479029 C4BP0C0L5 1744 aa22.6■■□□□ 1.21
PHF1-207ENST00000479029 TAF1LQ8IZX4 1826 aa22.6■■□□□ 1.21
PHF1-207ENST00000479029 PER1O15534 1290 aaPredicted RBP22.6■■□□□ 1.21
PHF1-207ENST00000479029 GOLGB1Q14789 3259 aaKnown RBP22.59■■□□□ 1.21
PHF1-207ENST00000479029 GNPATO15228 680 aa22.59■■□□□ 1.21
PHF1-207ENST00000479029 SMIM5Q71RC9 77 aa22.59■■□□□ 1.21
PHF1-207ENST00000479029 RBM42Q9BTD8 480 aaKnown RBP22.58■■□□□ 1.21
PHF1-207ENST00000479029 CD2APQ9Y5K6 639 aa22.58■■□□□ 1.21
PHF1-207ENST00000479029 CC2D1BQ5T0F9 858 aaKnown RBP22.57■■□□□ 1.2
PHF1-207ENST00000479029 KDRP35968 1356 aa22.57■■□□□ 1.2
PHF1-207ENST00000479029 ZNF784Q8NCA9 323 aaPredicted RBP22.56■■□□□ 1.2
PHF1-207ENST00000479029 KDM6AO15550 1401 aaPredicted RBP22.55■■□□□ 1.2
PHF1-207ENST00000479029 GRIN3BO60391 1043 aa22.54■■□□□ 1.2
PHF1-207ENST00000479029 NFATC2IPQ8NCF5 419 aa22.54■■□□□ 1.2
PHF1-207ENST00000479029 SLC4A9Q96Q91 983 aa22.54■■□□□ 1.2
PHF1-207ENST00000479029 RTCBQ9Y3I0 505 aaKnown RBP22.53■■□□□ 1.2
PHF1-207ENST00000479029 TRAPPC3LQ5T215 181 aa22.52■■□□□ 1.2
PHF1-207ENST00000479029 RC3H1Q5TC82 1133 aaKnown RBP22.52■■□□□ 1.2
PHF1-207ENST00000479029 UBR3Q6ZT12 1888 aa22.51■■□□□ 1.19
PHF1-207ENST00000479029 DIAPH1O60610 1272 aaKnown RBP22.51■■□□□ 1.19
PHF1-207ENST00000479029 HMOX1P09601 288 aa22.51■■□□□ 1.19
PHF1-207ENST00000479029 AKAP4Q5JQC9 854 aa22.51■■□□□ 1.19
PHF1-207ENST00000479029 PTCD1O75127 700 aaKnown RBP22.5■■□□□ 1.19
PHF1-207ENST00000479029 YBX3P16989 372 aaKnown RBP eCLIP22.5■■□□□ 1.19
PHF1-207ENST00000479029 CHD4Q14839 1912 aa22.5■■□□□ 1.19
PHF1-207ENST00000479029 NPC1L1Q9UHC9 1359 aa22.49■■□□□ 1.19
PHF1-207ENST00000479029 ADRA2BP18089 450 aa22.48■■□□□ 1.19
PHF1-207ENST00000479029 CNGB1Q14028 1251 aaPredicted RBP22.48■■□□□ 1.19
PHF1-207ENST00000479029 CNTNAP4Q9C0A0 1308 aa22.48■■□□□ 1.19
PHF1-207ENST00000479029 RPS6KA4O75676 772 aa22.47■■□□□ 1.19
PHF1-207ENST00000479029 NLGN1Q8N2Q7 840 aa22.47■■□□□ 1.19
PHF1-207ENST00000479029 MMP10P09238 476 aa22.46■■□□□ 1.19
PHF1-207ENST00000479029 ARHGEF1Q92888 912 aaKnown RBP22.46■■□□□ 1.19
PHF1-207ENST00000479029 RFC4P35249 363 aa22.45■■□□□ 1.18
PHF1-207ENST00000479029 SLC52A2Q9HAB3 445 aa22.45■■□□□ 1.18
PHF1-207ENST00000479029 LGR6Q9HBX8 967 aa22.45■■□□□ 1.18
PHF1-207ENST00000479029 ZNF831Q5JPB2 1677 aa22.43■■□□□ 1.18
PHF1-207ENST00000479029 RNMTO43148 476 aaKnown RBP22.43■■□□□ 1.18
PHF1-207ENST00000479029 MTHFSDQ2M296 383 aaKnown RBP22.43■■□□□ 1.18
PHF1-207ENST00000479029 CRKLP46109 303 aaKnown RBP22.42■■□□□ 1.18
PHF1-207ENST00000479029 U2SURPO15042 1029 aaKnown RBP22.41■■□□□ 1.18
PHF1-207ENST00000479029 GYS1P13807 737 aa22.4■■□□□ 1.18
PHF1-207ENST00000479029 SLC39A6Q13433 755 aa22.37■■□□□ 1.17
PHF1-207ENST00000479029 WWC3Q9ULE0 1092 aa22.37■■□□□ 1.17
PHF1-207ENST00000479029 PARP3Q9Y6F1 533 aa22.37■■□□□ 1.17
PHF1-207ENST00000479029 SCN11AQ9UI33 1791 aa22.37■■□□□ 1.17
PHF1-207ENST00000479029 TGFB2P61812 414 aa22.36■■□□□ 1.17
PHF1-207ENST00000479029 INTS5Q6P9B9 1019 aaKnown RBP22.36■■□□□ 1.17
PHF1-207ENST00000479029 DNAJC10Q8IXB1 793 aa22.36■■□□□ 1.17
PHF1-207ENST00000479029 CFAP53Q96M91 514 aa22.36■■□□□ 1.17
PHF1-207ENST00000479029 CCDC87Q9NVE4 849 aa22.36■■□□□ 1.17
PHF1-207ENST00000479029 COL5A3P25940 1745 aaPredicted RBP22.36■■□□□ 1.17
PHF1-207ENST00000479029 MYH14Q7Z406 1995 aaKnown RBP22.35■■□□□ 1.17
PHF1-207ENST00000479029 COL3A1P02461 1466 aaPredicted RBP22.34■■□□□ 1.17
PHF1-207ENST00000479029 GAS2L2Q8NHY3 880 aa22.34■■□□□ 1.17
PHF1-207ENST00000479029 GNAT3A8MTJ3 354 aa22.33■■□□□ 1.17
PHF1-207ENST00000479029 SRP68Q9UHB9 627 aaKnown RBP22.33■■□□□ 1.17
PHF1-207ENST00000479029 MRC1P22897 1456 aa22.33■■□□□ 1.16
PHF1-207ENST00000479029 USP42Q9H9J4 1324 aaKnown RBP22.32■■□□□ 1.16
PHF1-207ENST00000479029 GIGYF1O75420 1035 aaPredicted RBP22.32■■□□□ 1.16
PHF1-207ENST00000479029 CYP19A1P11511 503 aaPredicted RBP22.32■■□□□ 1.16
PHF1-207ENST00000479029 C1QTNF8P60827 252 aa22.32■■□□□ 1.16
PHF1-207ENST00000479029 VSIG10Q8N0Z9 540 aa22.32■■□□□ 1.16
PHF1-207ENST00000479029 A0A0G2JLW4 131 aa22.31■■□□□ 1.16
PHF1-207ENST00000479029 ZPR1O75312 459 aa22.31■■□□□ 1.16
PHF1-207ENST00000479029 TEFQ10587 303 aa22.31■■□□□ 1.16
PHF1-207ENST00000479029 FKBP8Q14318 412 aa22.31■■□□□ 1.16
PHF1-207ENST00000479029 TTC5Q8N0Z6 440 aa22.31■■□□□ 1.16
PHF1-207ENST00000479029 NUDCQ9Y266 331 aa22.31■■□□□ 1.16
PHF1-207ENST00000479029 CICQ96RK0 1608 aaPredicted RBP22.31■■□□□ 1.16
PHF1-207ENST00000479029 IL17REQ8NFR9 667 aa22.3■■□□□ 1.16
PHF1-207ENST00000479029 C10orf71Q711Q0 1435 aa22.3■■□□□ 1.16
PHF1-207ENST00000479029 PXDNLA1KZ92 1463 aa22.29■■□□□ 1.16
PHF1-207ENST00000479029 SOS1Q07889 1333 aaPredicted RBP22.29■■□□□ 1.16
PHF1-207ENST00000479029 TJP1Q07157 1748 aa22.28■■□□□ 1.16
PHF1-207ENST00000479029 DPEP1P16444 411 aa22.28■■□□□ 1.16
PHF1-207ENST00000479029 PPP2R1AP30153 589 aa22.28■■□□□ 1.16
PHF1-207ENST00000479029 PRKAR2BP31323 418 aa22.28■■□□□ 1.16
PHF1-207ENST00000479029 BCS1LQ9Y276 419 aa22.28■■□□□ 1.16
PHF1-207ENST00000479029 STARD3NLO95772 234 aa22.27■■□□□ 1.16
PHF1-207ENST00000479029 PHACTR3Q96KR7 559 aa22.27■■□□□ 1.16
PHF1-207ENST00000479029 ATP10DQ9P241 1426 aa22.27■■□□□ 1.16
PHF1-207ENST00000479029 KCPQ6ZWJ8 1503 aa22.26■■□□□ 1.15
PHF1-207ENST00000479029 DDR1Q08345 913 aa22.26■■□□□ 1.15
PHF1-207ENST00000479029 USPL1Q5W0Q7 1092 aa22.26■■□□□ 1.15
PHF1-207ENST00000479029 RSPH6AQ9H0K4 717 aa22.26■■□□□ 1.15
PHF1-207ENST00000479029 ADAMTS7Q9UKP4 1686 aa22.26■■□□□ 1.15
PHF1-207ENST00000479029 C4AP0C0L4 1744 aa22.26■■□□□ 1.15
PHF1-207ENST00000479029 U2AF1L5P0DN76 240 aaPredicted RBP22.25■■□□□ 1.15
PHF1-207ENST00000479029 TM4SF1P30408 202 aa22.25■■□□□ 1.15
PHF1-207ENST00000479029 U2AF1Q01081 240 aaKnown RBP eCLIP22.25■■□□□ 1.15
PHF1-207ENST00000479029 ZNF790Q6PG37 636 aa22.25■■□□□ 1.15
PHF1-207ENST00000479029 GPBP1L1Q9HC44 474 aaPredicted RBP22.25■■□□□ 1.15
PHF1-207ENST00000479029 NARFQ9UHQ1 456 aa22.25■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms